10 20 30 40 50 60
----:----|----:----|----:----|----:----|----:----|----:----|----:
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
=================================================================================================
A PYRFU -----------------------------------------------------------------
A Pyrococcus_abyssi -----------------------------------------------------------------
=================================================================================================
* HUMAN -----------------------------------------------------------------
* S_CEREVISIAE -----------------------------------------------------------------
P ARABIDOPSIS_THALIANA -----------------------------------------------------------------
* 1JFIC_Human -----------------------------------------------------------------
* 1TBPA_S_cerevisiae -----------------------------------------------------------------
* Anopheles_gambiae -----------------------------------------------------------------
* Apis_mellifera ---------dqmlps------pgfsi----psigtpl-hqpeedqqilpnal-------------
* Aspergillus_flavus -----------------------------------------------------------------
* Aspergillus_fumigatus ---esltthpstaqqaraftspaslsf-p--ggagdltppssekegnit-------igaqga---
* Bovine dqnnslppyaqglaspqgamtpgipifspmmpygtgltpqpiqntnsls----------------
* C_briggsae nmnspasrsmmggetpahg-gpssvlggpssil-tghgpnsvmgpnsilgpgsmv----------
* C_elegans -nlnspavsmlggdtpah-g-gpnsvlgg--------qgpssiltghgpnsv--m---gpnsilg
* Candida_albicans -----------------------------------------------------------------
* Candida_glabrata -----------------------------------------------------------------
* Canis_lupus dqnnslppyaqglaspqgamtpgipifspmmpygtglt-pqpiqntnslslleeqqrqqq-----
* Cryptococcus_neoformans -----------------------------------------------------------------
* Danio_rerio ----eqnnslppfaqglaspqgam-tpglpif-spmmpygtgltpqp----vqnsn---------
* Debaryomyces_hansenii -----------------------------------------------------------------
* D_melanogaster dqmlspnfsipsigtplhqmeadqqivanpvyhppavsqpdslmpapgsssvqhqqqqqqsdasg
* Emericella_nidulans -----------------------------------------------------------------
* Encephalitozoon_cuniculi -----------------------------------------------------------------
* Eremothecium_gossypii -----------------------------------------------------------------
* Chicken dqnnslppyaqglaspqgamtpgipifspmmp---------------------------------
* Gibberella_zeae ---egiqthpsnaaqakaftapgslsf-pgat--neltpppv--------------gngdatqqp
* Kluyveromyces_lactis -----------------------------------------------------------------
* Macaca_mulatta dqnnslppyaqglaspqgamtpgipifspmmpygtgltpqpiqntnslsileeqqr---------
* Mesocricetus_auratus dqnnslppyaqglaspqgamtpgipifspmmpygtgltpqpiqntnsl-----------------
* Mouse dqnnslppyaqglaspqgamtpgipifspmmpygtgltpqpi-----------------------
* Neurospora_crassa -----------------------------------------------------------------
* Onchocerca_volvulus -----------------------------------------------------------------
* Petromyzon_marinus ----dssgsmpgfspnlgs----------------------------------------------
* Pneumocystis_carinii -----------------------------------------------------------------
* Rat dqnnslppyaqglaspqgamtpgipifspmmpygtgltpqpvqntnsl-----------------
* Schizosaccharomyces_pombe -----------------------------------------------------------------
* Strongylocentrotus_purpuratus -----------------------------------------------------------------
* Tetraodon_nigroviridis ----desaleryfedsiandsgflleeelsig-sptls--stylp--------------------
* Tribolium_castaneum ---------dqmlpsp-gfsipsi---------gtpl----------------------------
* Ustilago_maydis -----------------------------------------------------------------
* X_laevis ----dqnnsippf-qglaspqgs-ltpginif-splitygtgltpqp----vqttn---------
* X_tropicalis dqnnsippf-qglaspqgsltpginifsp------------------------------------
* Yarrowia_lipolytica -----------------------------------------------------------------
Dictyostelium_discoideum -----------------------------------------------------------------
Tetrahymena_thermophila -----------------------------------------------------------------
P Glycine_max -----------------------------------------------------------------
P Oryza_sativa -----------------------------------------------------------------
P Arabidopsis_thaliana-TBP2 -----------------------------------------------------------------
P Maize-TBP1 -----------------------------------------------------------------
P Maize-TBP1_VAR -----------------------------------------------------------------
P Maize-TBP2 -----------------------------------------------------------------
=================================================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
70 80 90 100 110 120 130
----|----:----|----:----|----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
=================================================================================================
A PYRFU -----------------------------------------------------------------
A Pyrococcus_abyssi -----------------------------------------------------------------
=================================================================================================
* HUMAN -----------------------------------------------------------------
* S_CEREVISIAE -----------------------------------------------------------------
P ARABIDOPSIS_THALIANA -----------------------------------------------------------------
* 1JFIC_Human -----------------------------------------------------------------
* 1TBPA_S_cerevisiae -----------------------------------------------------------------
* Anopheles_gambiae -----------------------------------------------------------------
* Apis_mellifera -----------------------------------------------------------------
* Aspergillus_flavus ----------------dsltthpstaqqaraftspaslsfpggag---d-ltppsdkdgnmamnl
* Aspergillus_fumigatus ngtvnghqqggnav---------------------------------------------------
* Bovine -----------------------------------------------------------------
* C_briggsae -----------------------------------------------------------------
* C_elegans pgsvl------------------------------------------------------------
* Candida_albicans -----------------------------------------------------------------
* Candida_glabrata -----------------------------------------------------------------
* Canis_lupus ---------------qqqqaqqqqaqqqqqqqqaqqqavtavqqstsqqatqgasgqtpqlfhsq
* Cryptococcus_neoformans -----------------------------------------------------------------
* Danio_rerio ---------slslleeqqr------qqqqqqaasqqqggmvggsgqtpq-lyhstqavs------
* Debaryomyces_hansenii -----------------------------------------------------------------
* D_melanogaster gsglfghepslplahkqmqsyqpsasyqqqqqqqqlqsqapggggstpqsmmqpqtpqsmmahmm
* Emericella_nidulans -----------------------------------------------------------------
* Encephalitozoon_cuniculi -----------------------------------------------------------------
* Eremothecium_gossypii -----------------------------------------------------------------
* Chicken -----------------------------------------------------------------
* Gibberella_zeae ph--ngqqaa-------------------------------------------------------
* Kluyveromyces_lactis -----------------------------------------------------------------
* Macaca_mulatta -----------------------------------------------------------------
* Mesocricetus_auratus -----------------------------------------------------------------
* Mouse -----------------------------------------------------------------
* Neurospora_crassa -----------------------------------------------------------------
* Onchocerca_volvulus -----------------------------------------------------------------
* Petromyzon_marinus -----------------------------------------------------------------
* Pneumocystis_carinii -----------------------------------------------------------------
* Rat -----------------------------------------------------------------
* Schizosaccharomyces_pombe -----------------------------------------------------------------
* Strongylocentrotus_purpuratus -----------------------------------------------------------------
* Tetraodon_nigroviridis -----------------------------------------------------------------
* Tribolium_castaneum -----------------------------------------------------------------
* Ustilago_maydis -----------------------------------------------------------------
* X_laevis ---------slsileeqqr------qqqqtqqstlqqgnq--gsgqtpq-lfhp-qtl-------
* X_tropicalis -----------------------------------------------------------------
* Yarrowia_lipolytica -----------------------------------------------------------------
Dictyostelium_discoideum -----------------------------------------------------------------
Tetrahymena_thermophila -----------------------------------------------------------------
P Glycine_max -----------------------------------------------------------------
P Oryza_sativa -----------------------------------------------------------------
P Arabidopsis_thaliana-TBP2 -----------------------------------------------------------------
P Maize-TBP1 -----------------------------------------------------------------
P Maize-TBP1_VAR -----------------------------------------------------------------
P Maize-TBP2 -----------------------------------------------------------------
=================================================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
140 150 160 170 180 190
----:----|----:----|----:----|----:----|----:----|----:----|----:
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
=================================================================================================
A PYRFU -----------------------------------------------------------------
A Pyrococcus_abyssi -----------------------------------------------------------------
=================================================================================================
* HUMAN ---------------------qqqqq----qq----qqqq------qqq-------qqqqqqqq-
* S_CEREVISIAE ----------------------------------------------ade-------erlkefke-
P ARABIDOPSIS_THALIANA ---------------------tdqgl----eg----snpv------dls-------khp------
* 1JFIC_Human -----------------------------------------------------------------
* 1TBPA_S_cerevisiae -----------------------------------------------------------------
* Anopheles_gambiae ---------------------qpeed----qq----ilph------ayq-------qqqsmphm-
* Apis_mellifera ---------------------qqqqq----qq----qqqq------qsq-------qqqqsqqqy
* Aspergillus_flavus qgvnghvngqqqggnat----ngngv----tp----atpv-atp--gan-------tpg------
* Aspergillus_fumigatus ---------------------ngngv----tp----atpa-atp--gan-------apg------
* Bovine ---------------------ileeq----qr----qqqq------qqq-------qqqqqqqq-
* C_briggsae ---------------------npqsi----qp----mqsh------qmh-------slqgssmq-
* C_elegans ---------------------npqsi----qp----mqsq------qmh-------slqgssmq-
* Candida_albicans ------------------------------------------------d-------lklpptnp-
* Candida_glabrata ----------------------------------------------ade-------ermkefqe-
* Canis_lupus tl-------------------ttapl----pg----ttplypspmtpmt---pitpatpases--
* Cryptococcus_neoformans -----------------------------------------------------------------
* Danio_rerio ---------------------tttal----pg----ntplytt---pltpmtpitpatpases--
* Debaryomyces_hansenii -----------------------------------------------ds-------lklpttaa-
* D_melanogaster pmsersvggsgaggggdalsnihqtm----gp----stpm------tpa-------tpg------
* Emericella_nidulans ----------------------dslt----th----pata------qqa-------raftspss-
* Encephalitozoon_cuniculi ---------------------dapdi----sy----ehqe------tsv-------pnr------
* Eremothecium_gossypii ----------------------------------------------sdd-------krlkefqe-
* Chicken ---------------------ygtgl----tp----qpvq------stn-------slsileeq-
* Gibberella_zeae ---------------------ngngv----ap----atpv-atp--aat-------qgp------
* Kluyveromyces_lactis ----------------------------------------------see-------nrmkqfqe-
* Macaca_mulatta ---------------------qqqqq----qq----qqqq------qqq-------qqqqqqqq-
* Mesocricetus_auratus ---------------------silee----qq----reqq------qqq-------qqqqqqqq-
* Mouse ---------------------qntnslsilee----qqrq------qqq-------qqqqqqqq-
* Neurospora_crassa ------------------------------------------------d-------aiqthpsn-
* Onchocerca_volvulus -----------------------------------------------------------------
* Petromyzon_marinus ---------------------qqggm----tp----gmpl------fsp-------mmpygtgl-
* Pneumocystis_carinii -----------------------------------------------------------------
* Rat ---------------------silee----qq----rqqq------qqq-------qqqqqqqq-
* Schizosaccharomyces_pombe -----------------------------------------------------------------
* Strongylocentrotus_purpuratus ---------------------ynpsq----av----pvsl------hkn-------qdnqdggq-
* Tetraodon_nigroviridis ----------------------------------------------gka-------glsrgsge-
* Tribolium_castaneum ---------------------hqpee----dqmilpnalq------qqq-------qqqpstts-
* Ustilago_maydis ---------------------dqqgl----s-----------------s-------vh-------
* X_laevis ---------------------ttapl----pg----ntplypspitpmt---pispatpases--
* X_tropicalis ---------------------lmpyg----tg----ltpq------pvq-------ttnslsil-
* Yarrowia_lipolytica ---------------------------------------------------------------d-
Dictyostelium_discoideum -----------st--------attts----tp----aqnv------dls-------khp------
Tetrahymena_thermophila --------ssdktsqqtfklapnnsv----aq----snsi------dqn-------knk------
P Glycine_max ---------------------adqgl----eg----sqpv------dlq-------khp------
P Oryza_sativa --------aae----------aaaal----eg----sepv------dla-------khp------
P Arabidopsis_thaliana-TBP2 ---------------------adqgt----eg----sqpv------dlt-------khp------
P Maize-TBP1 ---------------------aepgl----ed----sqpv------dls-------khp------
P Maize-TBP1_VAR ---------------------aeprl----ed----sqpv------dls-------khp------
P Maize-TBP2 ---------------------aepgl----eg----sqpv------dls-------khp------
=================================================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
200 210 220 230 240 250 260
----|----:----|----:----|----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
=================================================================================================
A PYRFU -----------------------------------------------------------------
A Pyrococcus_abyssi -----------------------------------------------------------------
=================================================================================================
* HUMAN --qqqavaaaavqq-----s---tsqq-----at-q-gtsg---------q--ap-----ql-fh
* S_CEREVISIAE --ankivfdpntrq-----v---wenq-----nr-d-gt-----------k--pa-----tt-fq
P ARABIDOPSIS_THALIANA -----------------------------------------------------------------
* 1JFIC_Human -----------------------------------------------------------------
* 1TBPA_S_cerevisiae -----------------------------------------------------------------
* Anopheles_gambiae --tpmgglsssnyt-----m---paig-----st-s-gksm---------htyap-----sf-st
* Apis_mellifera qlqqlhtmspniqsgmlmig---tpqknmhayat-t-ptfa---------t--pq-----sl-mq
* Aspergillus_flavus -----------------------------------------------------------------
* Aspergillus_fumigatus -----------------------------------------------------------------
* Bovine --qqqqaavaavqq-----s---tsqq-----at-q-gpsg---------q--tp-----ql-fh
* C_briggsae --mhshlansalnl-----n---inpa-----svgp-gnpgsvlhhnmdin--pp-----svayq
* C_elegans --mhshlansnlnl-----n---inpa-----sv-g-pdrn---------p--gs-----vm-hh
* Candida_albicans --tnpqqaktfmks-----i---eede-----kn-k-ae-----------d--ld-----ii-kk
* Candida_glabrata --ankavfdpntrq-----v---wenq-----vn-k-te-----------d--da-----vk-pe
* Canis_lupus -----------------------------------------------------------------
* Cryptococcus_neoformans ---------sglal-----p---kasn-----ag-p-ssss---------s--kp-----eg-iq
* Danio_rerio -----------------------------------------------------------------
* Debaryomyces_hansenii --qakaftapnsll-----fplgidgq-----rt-d-in-----------q--ea-----tp-kk
* D_melanogaster -----------------------------------------------------------------
* Emericella_nidulans --lsfpggtafpgg-----a---dltp-----ps-d-kdan---------m--at-----ng-qs
* Encephalitozoon_cuniculi -----------------------------------------------------------------
* Eremothecium_gossypii --qnkivfdhstrs-----v---wenq-----dk-d-ss-----------m--gh-----lm-gg
* Chicken --qrqqqqqqaaqs-----s---tsqq-----at-q-gtsg---------q--tp-----ql-fh
* Gibberella_zeae -----------------------------------------------------------------
* Kluyveromyces_lactis --enkivfdpstrs-----v---wetq-----ek-q-e--------------------------h
* Macaca_mulatta --qqqavaaaavqq-----s---tsqq-----tt-q-gtsg---------q--ap-----ql-fh
* Mesocricetus_auratus --qavataaasvqq-----s---tsqq-----st-q-gasg---------q--tp-----ql-fh
* Mouse --qavataaasvqq-----s---tsqq-----pt-q-gasg---------q--tp-----ql-fh
* Neurospora_crassa --aaqakaftapgs-----l---sfpg-----aa-g-eltp---------p--ts-----ta-ns
* Onchocerca_volvulus -----------------------------------------------------------------
* Petromyzon_marinus --tpqpvqgssmgm-----a---ddqq-----qp-qagtsq---------q--etgasqmqv-yq
* Pneumocystis_carinii --------------------------------ap-s-slsf---------p--ss-----hi-lm
* Rat --qavataaasvqq-----s---tsqq-----pt-q-gasg---------q--tp-----ql-fh
* Schizosaccharomyces_pombe -------------------------df-----al-p-ttas---------q--as-----af-mn
* Strongylocentrotus_purpuratus --qrshypqissqq-----s---qsyl-----sv-p-si-g------------tp-----s--fg
* Tetraodon_nigroviridis --eldlsflpdelg-----t---qeep-----sr-h-nd-----------t--aq-----te-aq
* Tribolium_castaneum --qsqqvpplapmg-----a---ltpt-----lg-l-gmgm---------s--mp-----htkya
* Ustilago_maydis -----------------------------------------------------------------
* X_laevis -----------------------------------------------------------------
* X_tropicalis --eeqqrqqqqaqq-----s---tsqq-----gn-q-g-sg---------q--tp-----ql-fh
* Yarrowia_lipolytica --alsaptnpaqaq-----q---fvtq-----n--n-ls-----------f--pq-----da--e
Dictyostelium_discoideum -----------------------------------------------------------------
Tetrahymena_thermophila -----------------------------------------------------------------
P Glycine_max -----------------------------------------------------------------
P Oryza_sativa -----------------------------------------------------------------
P Arabidopsis_thaliana-TBP2 -----------------------------------------------------------------
P Maize-TBP1 -----------------------------------------------------------------
P Maize-TBP1_VAR -----------------------------------------------------------------
P Maize-TBP2 -----------------------------------------------------------------
=================================================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
270 280 290 300 310 320
----:----|----:----|----:----|----:----|----:----|----:----|----:
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
=================================================================================================
A PYRFU -----------------------------------------------------------------
A Pyrococcus_abyssi -----------------------------------------------------------------
=================================================================================================
* HUMAN --s----------q-t---l--tta-plp-----g----------ttp----l---y-p------
* S_CEREVISIAE --s----------e-e---d--ikr-aap-----e----------sek----d---t-s------
P ARABIDOPSIS_THALIANA -----------------------------------------------------------------
* 1JFIC_Human ----------------------------------------------------------s------
* 1TBPA_S_cerevisiae -----------------------------------------------------------------
* Anopheles_gambiae --p----------q-n---miqpqt-pvs-----gldlvvsclllksv----lilsf-s----ap
* Apis_mellifera --p----------q-tpqnm--msp-lvq-----n----------tnh----i---a-p------
* Aspergillus_flavus -----------------------------------------------------------------
* Aspergillus_fumigatus -----------------------------------------------------------------
* Bovine --s----------q-t---l--tta-plp-----g----------ttp----l---y-p------
* C_briggsae --n----------l-a---i--pmt-playnnfer----------dtl----m---h-p------
* C_elegans --nldinppsvayq-n---l--tvp-mtp-----l----------ays----v---ydr------
* Candida_albicans --e----------d-i---d--epk-qed-----t----------tdg----n---g-g------
* Candida_glabrata --a----------d-e---d-------------------------ede----d---d-a------
* Canis_lupus -----------------------------------------------------------------
* Cryptococcus_neoformans --t------------------------ld-----g----------egs----l---a-t------
* Danio_rerio -----------------------------------------------------------------
* Debaryomyces_hansenii --e----------e-d---t--sdtivep-----n----------qde----d---d-g------
* D_melanogaster -----------------------------------------------------------------
* Emericella_nidulans --a----------n-g---n--vng-qqq-----g----------ana----a---n-g------
* Encephalitozoon_cuniculi -----------------------------------------------------------------
* Eremothecium_gossypii --s----------v-v---q---se-skd-----s----------mda----d---h-g------
* Chicken --s----------q-t---l--tta-plp-----g----------ttp----l---y-p------
* Gibberella_zeae -----------------------------------------------------------------
* Kluyveromyces_lactis --e-----------------------slp-----g----------td------------------
* Macaca_mulatta --s----------q-t---l--tta-plp-----g----------ttp----l---y-p------
* Mesocricetus_auratus --s----------q-t---l--tta-plp-----g----------ttp----l---y-p------
* Mouse --s----------q-t---l--tta-plp-----g----------ttp----l---y-p------
* Neurospora_crassa --d----------k-s---a--avn-gai-----g----------aqa----a---n-g------
* Onchocerca_volvulus -----------------------------------------------------------------
* Petromyzon_marinus --t----------qgs---s--ttt-alp-----g----------cap----l---y-q------
* Pneumocystis_carinii --s----------g-a---m--ypg-srd-----e----------kgm----e---h-g------
* Rat --s----------q-t---l--tta-plp-----g----------ttp----l---y-p------
* Schizosaccharomyces_pombe --n----------s-s---l--tfp-vlp-----n----------ann--------e-a------
* Strongylocentrotus_purpuratus --s----------v-g---s--vss-lap-----g----------ssf----i---p-p------
* Tetraodon_nigroviridis aas----------q-d---s--avc-ldy-----n----------sqd----s---t-g------
* Tribolium_castaneum --g----------f-a---l--pit-siq-----s----------qtpqhtmm---s-pmvnlgg
* Ustilago_maydis -----------------------------------------------------------------
* X_laevis -----------------------------------------------------------------
* X_tropicalis --p----------q-t---l--tta-plp-----g----------ntp----l---y-p------
* Yarrowia_lipolytica --a----------d-t---s--lig-evk-----r----------eqv----d-----s------
Dictyostelium_discoideum -----------------------------------------------------------------
Tetrahymena_thermophila -----------------------------------------------------------------
P Glycine_max -----------------------------------------------------------------
P Oryza_sativa -----------------------------------------------------------------
P Arabidopsis_thaliana-TBP2 -----------------------------------------------------------------
P Maize-TBP1 -----------------------------------------------------------------
P Maize-TBP1_VAR -----------------------------------------------------------------
P Maize-TBP2 -----------------------------------------------------------------
=================================================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
330 340 350 360 370 380 390
----|----:----|----:----|----:----|----:----|----:----|----:----|
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
=================================================================================================
A PYRFU ----------------------------------------------------------------v
A Pyrococcus_abyssi ----------------------------------------------------------------v
=================================================================================================
* HUMAN ------sp-mtpmt-----------------------------------p-------itpatpas
* S_CEREVISIAE ------at---------------------------------------------------------
P ARABIDOPSIS_THALIANA -----------------------------------------------------------------
* 1JFIC_Human ------hm---------------------------------------------------------
* 1TBPA_S_cerevisiae -----------------------------------------------------------------
* Anopheles_gambiae qqslm-sp-mvpmteskaaatpshpqsgsggsvrdpenigsvnihqtmgp-------atpmtpmt
* Apis_mellifera ------ps-igpst-------pg--------------------------p-------mtpmtpas
* Aspergillus_flavus -----------------------------------------------------------------
* Aspergillus_fumigatus -----------------------------------------------------------------
* Bovine ------sp-mtpmt-----------------------------------p-------itpatpas
* C_briggsae ------pa-sniaa-----------------------------------t-------mvpatpas
* C_elegans ------da-lthqa-----------------------------------pasniaatmvpatpas
* Candida_albicans ------gg---------------------------------------------------------
* Candida_glabrata ------at---------------------------------------------------------
* Canis_lupus -----------------------------------------------------------------
* Cryptococcus_neoformans ------rp---pqk-----------------------------------a-------iasvpeit
* Danio_rerio -----------------------------------------------------------------
* Debaryomyces_hansenii ------at---------------------------------------------------------
* D_melanogaster -----------------------------------------------------------------
* Emericella_nidulans ------ng-vmpat-----------------------------------p-------aatpgasa
* Encephalitozoon_cuniculi -----------------------------------------------------------------
* Eremothecium_gossypii ------tt---------------------------------------------------------
* Chicken ------sp-mtpmt-----------------------------------p-------itpatpas
* Gibberella_zeae -----------------------------------------------------------------
* Kluyveromyces_lactis -------------a-----------------------------------n-------aedadkgs
* Macaca_mulatta ------sp-vtpmt-----------------------------------p-------itpatpas
* Mesocricetus_auratus ------sp-mtpmt-----------------------------------p-------itpatpas
* Mouse ------sp-mtpmt-----------------------------------p-------itpatpas
* Neurospora_crassa ------ng-vtpat-----------------------------------pa------atpaanqg
* Onchocerca_volvulus ------------------------------------------------------------dvps-
* Petromyzon_marinus ------sp-mtpmt-----------------------------------p-------mtpitpas
* Pneumocystis_carinii ------vv-stsln-----------------------------------q-------tatntfag
* Rat ------sp-mtpmt-----------------------------------p-------itpatpas
* Schizosaccharomyces_pombe ------tn-etads-----------------------------------g-------daevskne
* Strongylocentrotus_purpuratus ------sp-maplt-----------------------------------p-------atpas--s
* Tetraodon_nigroviridis ------aslsgggalnspfcpmtpmtpmtpmtpvter----------------------------
* Tribolium_castaneum ssgaantpsmgpat-------ps--------------------------p-------ltpmtphs
* Ustilago_maydis -----------------------------------------------------------------
* X_laevis -----------------------------------------------------------------
* X_tropicalis ------sp-mtpmt-----------------------------------p-------itpatpas
* Yarrowia_lipolytica ------gv---------------------------------------------------------
Dictyostelium_discoideum -----------------------------------------------------------------
Tetrahymena_thermophila -----------------------------------------------------------------
P Glycine_max -----------------------------------------------------------------
P Oryza_sativa -----------------------------------------------------------------
P Arabidopsis_thaliana-TBP2 -----------------------------------------------------------------
P Maize-TBP1 -----------------------------------------------------------------
P Maize-TBP1_VAR -----------------------------------------------------------------
P Maize-TBP2 -----------------------------------------------------------------
=================================================================================================
Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
400 410 420 430 440 450
----:----|----:----|----:----|----:----|----:----|----:----|----:
Consensus xxnxxxgivxxxxxxxxxxxxxxxPxLQNIVsTVNLxckLDLKtIALhARNAEYNPKxxxxxxRF
=================================================================================================
A PYRFU dmS---kVk---------------lrIENIVaSVDLfaQLDLEkVldlcpNsKYNPE------eF
A Pyrococcus_abyssi dtN---nVk---------------lrIENIVaSVDLfaQLDLEkVldicpNsKYNPE------eF
=================================================================================================
* HUMAN esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* S_CEREVISIAE --S---GIV---------------PtLQNIVaTVtLgCRLDLKTVALHARNAEYNPK------RF
P ARABIDOPSIS_THALIANA --S---GIV---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
* 1JFIC_Human --S---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* 1TBPA_S_cerevisiae --m---GIV---------------PtLQNIVaTVtLgCRLDLKTVALHARNAEYNPK------RF
* Anopheles_gambiae pse--paIL---------------PqLQNIVSTVNLsCKLDLKkIALHARNAEYNPK------RF
* Apis_mellifera adp---GIL---------------PqLQNIVSTVNLnCKLDLKkIALHARNAEYNPK------RF
* Aspergillus_flavus --S---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Aspergillus_fumigatus --S---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Bovine esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* C_briggsae qlD---ipM---------------PaLQNIVSTVNLgvpLDLKkIALHARNAEYNPK------RF
* C_elegans qlD---ipM---------------PaLQNIVSTVNLgvQLDLKkIALHARNAEYNPK------RF
* Candida_albicans --i---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Candida_glabrata --S---GIV---------------PtLQNIVaTVNLgCRLDLKTVALHARNAEYNPK------RF
* Canis_lupus --S---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Cryptococcus_neoformans avD---GLV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPR------RF
* Danio_rerio --S---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Debaryomyces_hansenii --S---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* D_melanogaster --SadpGIV---------------PqLQNIVSTVNLcCKLDLKkIALHARNAEYNPK------RF
* Emericella_nidulans pgS---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Encephalitozoon_cuniculi --S---GII---------------PtLQNVVaTVNLsCKLDLKnIALrARNAEYNPK------RF
* Eremothecium_gossypii --S---GIV---------------PtLQNIVaTVNLdCRLDLKTVALHARNAEYNPK------RF
* Chicken esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Gibberella_zeae --S---GIt---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPKvhqtlrRF
* Kluyveromyces_lactis atS---GII---------------PtLQNIVaTVNLdCRLDLKTVALHARNAEYNPK------RF
* Macaca_mulatta esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Mesocricetus_auratus esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Mouse esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Neurospora_crassa ptS---GMt---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Onchocerca_volvulus ------------------------PaLQNIVSTVNLgvpLDLKkIALHARNAEYNPK------RF
* Petromyzon_marinus esS---GIV---------------PqLQNIVSTVNLcCKLDLKkIALHARNAEYNPK------RF
* Pneumocystis_carinii -vS---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Rat esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Schizosaccharomyces_pombe gvS---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
* Strongylocentrotus_purpuratus esS---GIV---------------PqLQNIVSTVNLnCRLDLKkIALHARNAEYNPK------RF
* Tetraodon_nigroviridis --S---GII---------------PqLQNIVSTVNLgCpLDLKfIALqARNAEYNPK------RF
* Tribolium_castaneum adp---nIV---------------PqLQNIVSTVNLsCKLDLKkIALHARNAEYNPK------RF
* Ustilago_maydis ------GIV---------------PtLQNIVaTVNLevRLDLKTIALHARNAEYNPK------RF
* X_laevis --S---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* X_tropicalis esS---GIV---------------PqLQNIVSTVNLgCKLDLKTIALrARNAEYNPK------RF
* Yarrowia_lipolytica --S---GIV---------------PtLQNIVaTVNLdCRLDLKTIALHARNAEYNPK------RF
Dictyostelium_discoideum --S---GII---------------PtLQNIVSTVNMatELyLKaIALgARNAEYNPK------RF
Tetrahymena_thermophila --N---nILstietmdksisedlyPkLQNIVSTVNLstKLDLKqIALrARNAEYNPK------RF
P Glycine_max --S---GIV---------------PtLQNIVSTVNLdCKLDLKTIALqARNAEYNPK------RF
P Oryza_sativa --S---GII---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
P Arabidopsis_thaliana-TBP2 --S---GIV---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
P Maize-TBP1 --S---GIV---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
P Maize-TBP1_VAR --S---GIV---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
P Maize-TBP2 --S---GIV---------------PtLQNIVSTVNLdCKLDLKaIALqARNAEYNPK------RF
=================================================================================================
Consensus xxnxxxgivxxxxxxxxxxxxxxxPxLQNIVsTVNLxckLDLKtIALhARNAEYNPKxxxxxxRF
460 470 480 490 500 510 520
----|----:----|----:----|----:----|----:----|----:----|----:----|
Consensus AAVIMRIREPKTTALIFxSGKMVcTGAKSEEnSKlAaRKYAQIIQKLGFxaxKFxEFkIQNIVgS
=================================================================================================
A PYRFU pgIIchLdDPKvalLIFsSGKLVvTGAKSvQDiErAvaKlAQkLKsIGvkfkRapQidVQNMVfS
A Pyrococcus_abyssi pgIIcRfdDPKvalLIFsSGKLVvTGAKSihDiErAvaKliEkLKgIGvkfkRaplidIQNMVfS
=================================================================================================
* HUMAN AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* S_CEREVISIAE AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKIGFaA-KFtDFKIQNIVGS
P ARABIDOPSIS_THALIANA AAVIMRIREPKTTALIFaSGKMVCTGAKSEDfSKMAARKYARIVQKLGFpA-KFkDFKIQNIVGS
* 1JFIC_Human AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* 1TBPA_S_cerevisiae AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKIGFaA-KFtDFKIQNIVGS
* Anopheles_gambiae AAVIMRIREPRTTALIFsSGKMVCTGAKSEDDSRLAARKYARIIQKLGFtA-KFlDFKVQNMVGS
* Apis_mellifera AAVIMRIREPRTTALIFsSGKMVCTGAKSEEDSRLAARKYARIIQKLGFpA-KFlDFKIQNMVGS
* Aspergillus_flavus AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKLGFnA-KFtDFKIQNIVGS
* Aspergillus_fumigatus AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKLGFnA-KFtDFKIQNIVGS
* Bovine AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* C_briggsae AAVIMRIREPRTTALIFsSGKMVCTGAKSEEaSRLAARKYARIVQKLGFqA-KFtEFmVQNMVGS
* C_elegans AAVIMRIREPRTTALIFsSGKMVCTGAKSEEaSRLAARKYARIVQKLGFqA-KFtEFmVQNMVGS
* Candida_albicans AAVIMRIRDPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKLGFnA-KFcDFKIQNIVGS
* Candida_glabrata AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKIGFaA-KFtDFKIQNIVGS
* Canis_lupus AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* Cryptococcus_neoformans AAVVMRIRDPRTTALIFaSGKMVvTGAKSEDDSRLAsRKYARIIQKLGFeA-KFaEFKIQNMVGS
* Danio_rerio AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* Debaryomyces_hansenii AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKLGFnA-KFtDFKIQNIVGS
* D_melanogaster AAVIMRIREPRTTALIFsSGKMVCTGAKSEDDSRLAARKYARIIQKLGFpA-KFlDFKIQNMVGS
* Emericella_nidulans AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKLGFnA-KFtDFKIQNIVGS
* Encephalitozoon_cuniculi AAVIMRIREPKTTALIFaSGKMViTGAKSEKSSRMAAQRYAKIIhKLGFnA-tFdDFKIQNIVsS
* Eremothecium_gossypii AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKIGFsA-KFtDFKIQNIVGS
* Chicken AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* Gibberella_zeae AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKLGFnA-KFtDFKIQNIVGS
* Kluyveromyces_lactis AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKIGFsA-KFtDFKIQNIVGS
* Macaca_mulatta AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* Mesocricetus_auratus AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* Mouse AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* Neurospora_crassa AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKLGFnA-KFtDFKIQNIVGS
* Onchocerca_volvulus AAVIMRIREPRTTALIFsSGKMVCTGAKSEESSRLAARKYARIVQKLGFnA-KFtEFKVQNMVGS
* Petromyzon_marinus AAVIMRIREPRTTALIFsSGKMVCTGAKSEDqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* Pneumocystis_carinii AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSKLAsRKYARIIQKLGFnA-KFtDFKIQNIVGS
* Rat AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* Schizosaccharomyces_pombe AAVIMRIREPKSTALIFaSGKMVvlGgKSEDDSKLAsRKYARIIQKLGFnA-KFtDFKIQNIVGS
* Strongylocentrotus_purpuratus AAVIMRIREPRTTALIFsSGKMVCTGAKrEDNSRLAARKYARVVQKLGFaA-KFlDFKIQNMVGS
* Tetraodon_nigroviridis AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-RFlDFKIQNMVaS
* Tribolium_castaneum AAVIMRIREPRTTALIFsSGKMVCTGAKSEDDSRLAARKYARIIQKLGFpA-KFlDFKIQNMVGS
* Ustilago_maydis AAVIMRIREPKTTALIFaSGKMVvTGAKSEDDSRLAsRKYARIIQKLGFeA-KFsEFKIQNIVGS
* X_laevis AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* X_tropicalis AAVIMRIREPRTTALIFsSGKMVCTGAKSEEqSRLAARKYARVVQKLGFpA-KFlDFKIQNMVGS
* Yarrowia_lipolytica AAVIMRIREPKTTALIFaSGKMVvTGARSEDDSKLAsRKYARIIQKLGFnA-KFtDFKIQNIVGS
Dictyostelium_discoideum AAVIMRIREPKTTALIFkSGKMVCTGAKSEDaSRfAARKYARIIQKLdFpA-RFtDFKIQNIVGS
Tetrahymena_thermophila AAVIMRLRDPKTTALIFaSGKMVCTGAKTEEDSnrAARKYAKIIQKIGFpv-QFkDFKIQNIVGS
P Glycine_max AAVIMRIRDPKTTALIFaSGKMVCTGAKSEQqSKLAARKYARIIQKLGFpA-KFkDFKIQNIVGS
P Oryza_sativa AAVIMRIREPKTTALIFaSGKMVCTGAKSEQqSKLAARKYARIIQKLGFpA-KFkDFKIQNIVGS
P Arabidopsis_thaliana-TBP2 AAVIMRIREPKTTALIFaSGKMVCTGAKSEhlSKLAARKYARIVQKLGFpA-KFkDFKIQNIVGS
P Maize-TBP1 AAVIMRIREPKTTALIFaSGKMVCTGAKSEQqSKLAARKYARIIQKLGFpA-KFkDFKIQNIVGS
P Maize-TBP1_VAR AAVIMRIREPKTTALIFaSGKMVCTGAKSEQqSKLAARKYARIIQKLGFpA-KFkDFKIQNIVGS
P Maize-TBP2 AAVIMRIREPKTTALIFaSGKMVCTGAKSEQqSKLAARKYARIIQKLGFpA-KFkDFKIQNIVGS
=================================================================================================
Consensus AAVIMRIREPKTTALIFxSGKMVcTGAKSEEnSKlAaRKYAQIIQKLGFxaxKFxEFkIQNIVgS
530 540 550 560 570 580
----:----|----:----|----:----|----:----|----:----|----:----|----:
Consensus cDVkFpIrLEgLxxsHxxFssYEPELFPGLIYRMiqPKIVLLIFVSGKIVLTGAKvKeDiyeAFd
=================================================================================================
A PYRFU gDIgrefnLDvValTlp-nceYEPEqFPGVIYRVkEPKsVILLFsSGKIVcSGAKsEaDaWEAvr
A Pyrococcus_abyssi gDIgrefnLDnValTlp-nceYEPEqFPGVIYRVkdPRaVILLFsSGKIVcSGAKsEaDaWEAvr
=================================================================================================
* HUMAN CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* S_CEREVISIAE CDVKFPIRLEGLafSHgtFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKqREEIYQAFE
P ARABIDOPSIS_THALIANA CDVKFPIRLEGLaySHaaFSSYEPELFPGLIYRMkvPKIVLLIFVSGKIVITGAKMRDEtYKAFE
* 1JFIC_Human CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* 1TBPA_S_cerevisiae CDVKFPIRLEGLafSHgtFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKqREEIYQAFE
* Anopheles_gambiae CDVRFPIRLEGLvlTHgrFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFE
* Apis_mellifera CDVKFPIRLEGLvlTHgqFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFD
* Aspergillus_flavus CDIKFPIRLEGLasrHhnFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFE
* Aspergillus_fumigatus CDIKFPIRLEGLasrHhnFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFE
* Bovine CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* C_briggsae CDVRFPIQLEGLciTHaqFSTYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKtKKDIdDAFg
* C_elegans CDVRFPIQLEGLciTHsqFSTYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKtKrDIdEAFg
* Candida_albicans tDVKFaIRLEGLafaHgtFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKkREEIYDAFE
* Candida_glabrata CDVKFPIRLEGLafSHgtFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKqREEIYQAFE
* Canis_lupus CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* Cryptococcus_neoformans CDVKFPIRLEGLafSHgaFSSYEPELFPGLIYRMLKPKVVILIFVSGKIVLTGAKVREEIYmAFN
* Danio_rerio CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRgEIYEAFE
* Debaryomyces_hansenii CDVKFPIRLEGLafSHgtFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKqREEIYaAFE
* D_melanogaster CDVKFPIRLEGLvlTHcnFSSYEPELFPGLIYRMVRPRIVLLIFVSGKVVLTGAKVRQEIYDAFD
* Emericella_nidulans CDIKFPIRLEGLasrHhnFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFE
* Encephalitozoon_cuniculi CDIKFsIRLEGLayaHsnYcSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFN
* Eremothecium_gossypii CDVKFPIRLEGLafSHgtFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKqREEIYQAFE
* Chicken CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* Gibberella_zeae CDIKFPIRLEGLasrHhnFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFE
* Kluyveromyces_lactis CDVKFPIRLEGLafSHgtFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKqREEIYQAFE
* Macaca_mulatta CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* Mesocricetus_auratus CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* Mouse CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* Neurospora_crassa CDIKFPIRLEGLaskHhnFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFE
* Onchocerca_volvulus CDVRFPIQLEGLclTHtqFSTYEPELFPGLIYRMVKPRVVLLIFVSGKVVITGAKyKKDIdDAFN
* Petromyzon_marinus CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRgEIYEAFE
* Pneumocystis_carinii CDVKFPIRLEGLaySHgtFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFE
* Rat CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* Schizosaccharomyces_pombe CDVKFPIRLEGLaySHgtFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFE
* Strongylocentrotus_purpuratus CDVKFPIRLEGLvlTHgqFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFN
* Tetraodon_nigroviridis CDVcFPIRLEGLvlTHqqFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKeRaEIYEAFE
* Tribolium_castaneum CDVKFPIRLEGLvlTHssFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKIRQEIYEAFD
* Ustilago_maydis CDVRFPIRLEGLaySHgvYSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFN
* X_laevis CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* X_tropicalis CDVKFPIRLEGLvlTHqqFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRaEIYEAFE
* Yarrowia_lipolytica CDVKFPIRLEGLafSHgtFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKqREEIYaAFE
Dictyostelium_discoideum CDVKFPIKLElLhnaHtsFTNYEPEIFPGLIYKMIQPKVLLLIFVSGKIVLTGAKVREyIYEAFE
Tetrahymena_thermophila tDVKFPInLDhLeqdHkkFvqYEPEIFPGkIYRefntKIVLLIFVSGKIVLTGAKtRENInKAFq
P Glycine_max CDVKFPIRLEGLaySHgaFSSYEPELFPGLIYRMkQPKIVLLIFVSGKIVLTGAKVRDEtYtAFE
P Oryza_sativa CDVKFPIRLEGLaySHgaFSSYEPELFPGLIYRMkQPKIVLLIFVSGKIVLTGAKVRDEtYtAFE
P Arabidopsis_thaliana-TBP2 CDVKFPIRLEGLaySHsaFSSYEPELFPGLIYRMklPKIVLLIFVSGKIVITGAKMREEtYtAFE
P Maize-TBP1 CDVKFPIRLEGLaySHgaFSSYEPELFPGLIYRMkQPKIVLLIFVSGKIVLTGAKVREEtYtAFE
P Maize-TBP1_VAR CDVKFPIRLEGLaySHgaFSSYEPELFPGLIYRMkQPKIVLLIFVSGKIVLTGAKVREEtYtAFE
P Maize-TBP2 CDVKFPIRLEGLaySHgaFSSYEPELFPGLIYRMkQPKIVLLIFVSGKIVLTGAKVREEtYtAFE
=================================================================================================
Consensus cDVkFpIrLEgLxxsHxxFssYEPELFPGLIYRMiqPKIVLLIFVSGKIVLTGAKvKeDiyeAFd
590 600 610 620 630 640 650
----|----:----|----:----|----:----|----:----|----:----|----:----|
Consensus xIfpVLqxxxxxfrkxxxxxxxxxxxxxxxxxxxxxxxxxxx
==========================================================================
A PYRFU kLlreLdk-------yglleeeeeel----------------
A Pyrococcus_abyssi kLlreLEk-------yglieeeeeel----------------
==========================================================================
* HUMAN nIYPILKg----FRKtt-------------------------
* S_CEREVISIAE aIYPVLse----FRKm--------------------------
P ARABIDOPSIS_THALIANA nIYPVLse----FRKiqq------------------------
* 1JFIC_Human nIYPILKg----FRKt--------------------------
* 1TBPA_S_cerevisiae aIYPVLse----FRKm--------------------------
* Anopheles_gambiae nIYPILKs----FKKq--------------------------
* Apis_mellifera nIYPILKs----FKKq--------------------------
* Aspergillus_flavus lIYPVLsd----FRKv--------------------------
* Aspergillus_fumigatus lIYPVLsgtvilFfgfks-----nymltirsd--frkv----
* Bovine nIYPILKg----FRKtt-------------------------
* C_briggsae qIYPILKg----FKK---------------------------
* C_elegans qIYPILKg----FKK---------------------------
* Candida_albicans sIYPVLne----FRKn--------------------------
* Candida_glabrata aIYPVLse----FRKm--------------------------
* Canis_lupus nIYPILKg----FRKtt-------------------------
* Cryptococcus_neoformans qIYsVLle----FRKtt-------------------------
* Danio_rerio nIYPILKg----FRKts-------------------------
* Debaryomyces_hansenii aIYPVLse----FRKs--------------------------
* D_melanogaster kIFPILKk----FKKqs-------------------------
* Emericella_nidulans lIYPVLsd----FRKv--------------------------
* Encephalitozoon_cuniculi nIYPVLiq----hRKa--------------------------
* Eremothecium_gossypii aIYPVLse----FRKl--------------------------
* Chicken nIYPILKg----FRKtt-------------------------
* Gibberella_zeae mIYPVLQg----lRchhiisypthhiitilstcmirhkpsry
* Kluyveromyces_lactis aIYPVLse----FRKl--------------------------
* Macaca_mulatta nIYPILKg----FRKtt-------------------------
* Mesocricetus_auratus nIYPILKg----FRKtt-------------------------
* Mouse nIYPILKg----FRKtt-------------------------
* Neurospora_crassa mIYPVLQd----FRKv--------------------------
* Onchocerca_volvulus qIYPILKg----FKK---------------------------
* Petromyzon_marinus nIYPILKg----FRKtt-------------------------
* Pneumocystis_carinii aIYPVLse----FRKss-------------------------
* Rat nIYPILKg----FRKtt-------------------------
* Schizosaccharomyces_pombe aIYPVLse----FRKh--------------------------
* Strongylocentrotus_purpuratus nIYPILKs----FKKts-------------------------
* Tetraodon_nigroviridis nIYPILRg----FRKq--------------------------
* Tribolium_castaneum nIYPILKs----FKKq--------------------------
* Ustilago_maydis lIlPVLae----FRKp--------------------------
* X_laevis nIYPILKg----FRKtt-------------------------
* X_tropicalis nIYPILKg----FRKtt-------------------------
* Yarrowia_lipolytica aIYPVLne----FRKg--------------------------
Dictyostelium_discoideum nIYPVLsa----FKKvna--------itq-------------
Tetrahymena_thermophila kIYwVLyn----YQKkdy-------rganlhnqnlnikpsik
P Glycine_max nIYPVLte----FRKnqq------------------------
P Oryza_sativa nIYPVLte----FRKvqq------------------------
P Arabidopsis_thaliana-TBP2 nIYPVLRe----FRKvqq------------------------
P Maize-TBP1 nIYPVLae----FRKvqq------------------------
P Maize-TBP1_VAR nIYPVLae----FRKvqq------------------------
P Maize-TBP2 nIYPVLse----FRKiqq------------------------
==========================================================================
Consensus xIfpVLqxxxxxfrkxxxxxxxxxxxxxxxxxxxxxxxxxxx
This webpage, and all other files in or under this directory (except for those explicitly copyrighted or licensed otherwise), are licensed (copyright 2001-2008) by Allen Smith under a Creative Commons Attribution-ShareAlike 2.5 License; also available is a text version of the Legal Code of the license. (Of course, factual material is not copyrightable - fortunately!)