TATA-Binding Protein (TBP or TF2D)

                                        10        20        30        40        50        60
                                ----:----|----:----|----:----|----:----|----:----|----:----|----:
  Consensus                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
=================================================================================================
A PYRFU                         -----------------------------------------------------------------
A Pyrococcus_abyssi             -----------------------------------------------------------------
=================================================================================================
* HUMAN                         -----------------------------------------------------------------
* S_CEREVISIAE                  -----------------------------------------------------------------
P ARABIDOPSIS_THALIANA          -----------------------------------------------------------------
* 1JFIC_Human                   -----------------------------------------------------------------
* 1TBPA_S_cerevisiae            -----------------------------------------------------------------
* Anopheles_gambiae             -----------------------------------------------------------------
* Apis_mellifera                ---------dqmlps------pgfsi----psigtpl-hqpeedqqilpnal-------------
* Aspergillus_flavus            -----------------------------------------------------------------
* Aspergillus_fumigatus         ---esltthpstaqqaraftspaslsf-p--ggagdltppssekegnit-------igaqga---
* Bovine                        dqnnslppyaqglaspqgamtpgipifspmmpygtgltpqpiqntnsls----------------
* C_briggsae                    nmnspasrsmmggetpahg-gpssvlggpssil-tghgpnsvmgpnsilgpgsmv----------
* C_elegans                     -nlnspavsmlggdtpah-g-gpnsvlgg--------qgpssiltghgpnsv--m---gpnsilg
* Candida_albicans              -----------------------------------------------------------------
* Candida_glabrata              -----------------------------------------------------------------
* Canis_lupus                   dqnnslppyaqglaspqgamtpgipifspmmpygtglt-pqpiqntnslslleeqqrqqq-----
* Cryptococcus_neoformans       -----------------------------------------------------------------
* Danio_rerio                   ----eqnnslppfaqglaspqgam-tpglpif-spmmpygtgltpqp----vqnsn---------
* Debaryomyces_hansenii         -----------------------------------------------------------------
* D_melanogaster                dqmlspnfsipsigtplhqmeadqqivanpvyhppavsqpdslmpapgsssvqhqqqqqqsdasg
* Emericella_nidulans           -----------------------------------------------------------------
* Encephalitozoon_cuniculi      -----------------------------------------------------------------
* Eremothecium_gossypii         -----------------------------------------------------------------
* Chicken                       dqnnslppyaqglaspqgamtpgipifspmmp---------------------------------
* Gibberella_zeae               ---egiqthpsnaaqakaftapgslsf-pgat--neltpppv--------------gngdatqqp
* Kluyveromyces_lactis          -----------------------------------------------------------------
* Macaca_mulatta                dqnnslppyaqglaspqgamtpgipifspmmpygtgltpqpiqntnslsileeqqr---------
* Mesocricetus_auratus          dqnnslppyaqglaspqgamtpgipifspmmpygtgltpqpiqntnsl-----------------
* Mouse                         dqnnslppyaqglaspqgamtpgipifspmmpygtgltpqpi-----------------------
* Neurospora_crassa             -----------------------------------------------------------------
* Onchocerca_volvulus           -----------------------------------------------------------------
* Petromyzon_marinus            ----dssgsmpgfspnlgs----------------------------------------------
* Pneumocystis_carinii          -----------------------------------------------------------------
* Rat                           dqnnslppyaqglaspqgamtpgipifspmmpygtgltpqpvqntnsl-----------------
* Schizosaccharomyces_pombe     -----------------------------------------------------------------
* Strongylocentrotus_purpuratus -----------------------------------------------------------------
* Tetraodon_nigroviridis        ----desaleryfedsiandsgflleeelsig-sptls--stylp--------------------
* Tribolium_castaneum           ---------dqmlpsp-gfsipsi---------gtpl----------------------------
* Ustilago_maydis               -----------------------------------------------------------------
* X_laevis                      ----dqnnsippf-qglaspqgs-ltpginif-splitygtgltpqp----vqttn---------
* X_tropicalis                  dqnnsippf-qglaspqgsltpginifsp------------------------------------
* Yarrowia_lipolytica           -----------------------------------------------------------------
  Dictyostelium_discoideum      -----------------------------------------------------------------
  Tetrahymena_thermophila       -----------------------------------------------------------------
P Glycine_max                   -----------------------------------------------------------------
P Oryza_sativa                  -----------------------------------------------------------------
P Arabidopsis_thaliana-TBP2     -----------------------------------------------------------------
P Maize-TBP1                    -----------------------------------------------------------------
P Maize-TBP1_VAR                -----------------------------------------------------------------
P Maize-TBP2                    -----------------------------------------------------------------
=================================================================================================
  Consensus                     xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

Page 1 of 10


This webpage, and all other files in or under this directory (except for those explicitly copyrighted or licensed otherwise), are licensed (copyright 2001-2008) by Allen Smith under a Creative Commons Attribution-ShareAlike 2.5 License; also available is a text version of the Legal Code of the license. (Of course, factual material is not copyrightable - fortunately!)