Index of /research/perl

      Name                    Last modified      Size  Description
Parent Directory - Makefile 2008-02-09 15:34 12K Makefile.prior 2008-02-09 15:34 40K COPYING 2008-02-11 17:51 34K 3d_ali.extract.align..> 2008-02-24 20:12 11K 3d_ali.extract.pl 2008-02-24 20:12 21K add.restraints.wrapp..> 2008-02-24 20:12 2.3K align.all.seqs.to.ch..> 2008-02-24 20:12 25K align.atom.pdb.seqs.pl 2008-02-24 20:12 11K align.caccts.1.pl 2008-02-24 20:12 12K align.caccts.2.pl 2008-02-24 20:12 13K align.chain.to.seqs.pl 2008-02-24 20:12 27K align.clustered.pdbs..> 2008-02-24 20:12 81K align.clustered.pdbs..> 2008-02-24 20:12 7.7K align.clustered.pdbs.pl 2008-02-24 20:12 7.7K align.consensus.chai..> 2008-02-24 20:12 10K align.lsqrms.wrapper.pl 2008-02-24 20:12 4.6K align.nr.chain.to.se..> 2008-02-24 20:12 18K align.nr.partial.cha..> 2008-02-24 20:12 7.6K align.polymorphism.a..> 2008-02-24 20:12 20K align.polymorphism.pl 2008-02-24 20:12 290K align.to.central.2.pl 2008-02-24 20:12 115K align.to.central.3.pl 2008-02-24 20:12 83K analyze.align.cluste..> 2008-02-24 20:12 34K analyze.align.cluste..> 2008-02-24 20:12 19K analyze.align.cluste..> 2008-02-24 20:12 9.2K analyze.align.cluste..> 2008-02-24 20:12 11K analyze.align.cluste..> 2008-02-24 20:12 14K analyze.align.cluste..> 2008-02-24 20:12 14K analyze.align.cluste..> 2008-02-24 20:12 13K analyze.align.cluste..> 2008-02-24 20:12 9.9K analyze.align.to.cen..> 2008-02-24 20:12 20K analyze.align.to.cen..> 2008-02-24 20:12 24K average.hetatm.4.pl 2008-02-24 20:12 11K caccts.2.pl 2008-02-24 20:12 31K caccts.3.pl 2008-02-24 20:12 42K check.atom.distances..> 2008-02-24 20:12 5.5K check.atom.distances..> 2008-02-24 20:12 4.4K check.for.bumps.2.pl 2008-02-24 20:12 4.9K check.main.chain.dis..> 2008-02-24 20:12 4.3K check.pdb.vs.pfam.pl 2008-02-24 20:12 488K check.side.chain.dis..> 2008-02-24 20:12 3.5K check.single.structu..> 2008-02-24 20:12 21K check.water.for.pos...> 2008-02-24 20:12 6.8K cluster.chain.to.seq.pl 2008-02-24 20:12 34K combine.align.to.cen..> 2008-02-24 20:12 67K combine.structural.a..> 2008-02-24 20:12 279K compare.trees.proble..> 2008-02-24 20:12 27K consensus.2.chain.to..> 2008-02-24 20:12 8.3K consensus.2.nr.chain..> 2008-02-24 20:12 9.6K consensus.align.cons..> 2008-02-24 20:12 30K consensus.chain.to.s..> 2008-02-24 20:12 7.3K consensus.nr.chain.t..> 2008-02-24 20:12 13K consensus4.multiple.pl 2008-02-24 20:12 21K consensus5.multiple.pl 2008-02-24 20:12 22K convert.structal.pl 2008-02-24 20:12 71K create.freezegrps.2.pl 2008-02-24 20:12 11K create.ins.del.mutat..> 2008-02-24 20:12 32K create.mkrotscr.muta..> 2008-02-24 20:12 23K create.outgroup.seqs.pl 2008-02-24 20:12 54K create.restraints.1.pl 2008-02-24 20:12 9.7K create.restraints.2.pl 2008-02-24 20:12 15K create.similarity.ma..> 2008-02-24 20:12 17K create.tree.section.pl 2008-02-24 20:12 17K determine.parsimony...> 2008-02-24 20:12 40K do.reduce3.restore.pl 2008-02-24 20:12 3.1K estimate.starting.di..> 2008-02-24 20:12 247K extract.30.pairs.pl 2008-02-24 20:12 23K extract.atom.seqs.pl 2008-02-24 20:12 53K extract.chain.record..> 2008-02-24 20:12 5.8K extract.important.pd..> 2008-02-24 20:12 43K extract.needed.pdbs...> 2008-02-24 20:12 3.0K extract.protein.clus..> 2008-02-24 20:12 121K extract.r.values.pl 2008-02-24 20:12 19K extract.species.name..> 2008-02-24 20:12 511K extract.sptrembl.pol..> 2008-02-24 20:12 28K figure.out.kingdom.n..> 2008-02-24 20:12 5.3K find.AO.NO.AOP.const..> 2008-02-24 20:12 28K find.align.threshold..> 2008-02-24 20:12 23K find.distance.deviat..> 2008-02-24 20:12 70K find.helix.coil.sub...> 2008-02-24 20:12 16K find.pdbatom.stockho..> 2008-02-24 20:12 39K find.species.weights..> 2008-02-24 20:12 39K find.species.weights..> 2008-02-24 20:12 38K find.sub.groups.pl 2008-02-24 20:12 13K group.to.msf.pl 2008-02-24 20:12 54K group.to.msf.spread.pl 2008-02-24 20:12 27K homstrad.extract.pl 2008-02-24 20:12 26K integrate.sequence.a..> 2008-02-24 20:12 230K integrate.structural..> 2008-02-24 20:12 459K integrate.structural..> 2008-02-24 20:12 290K interpret.align.pdbs.pl 2008-02-24 20:12 7.4K interpret.important...> 2008-02-24 20:12 99K interpret.pdb.cluste..> 2008-02-24 20:12 67K interpret.probe.pl 2008-02-24 20:12 9.0K interpret.protein.fi..> 2008-02-24 20:12 311K interpret.ring.chang..> 2008-02-24 20:12 19K list.polymorphism.pl 2008-02-24 20:12 20K nexus.add.freqs.pl 2008-02-24 20:12 207K nexus.add.gap.partit..> 2008-02-24 20:12 44K nexus.add.kingdom.co..> 2008-02-24 20:12 39K nexus.add.usertree.s..> 2008-02-24 20:12 37K nexus.add.wag.pl 2008-02-24 20:12 13K nexus.cleanup.quarte..> 2008-02-24 20:12 48K nexus.consolidate.pa..> 2008-02-24 20:12 73K nexus.create.ncbi.su..> 2008-02-24 20:12 14K nexus.create.ncbi.su..> 2008-02-24 20:12 51K nexus.create.ncbi.su..> 2008-02-24 20:12 15K nexus.create.ncbi.su..> 2008-02-24 20:12 14K nexus.create.ncbi.su..> 2008-02-24 20:12 14K nexus.create.ncbi.su..> 2008-02-24 20:12 14K nexus.create.ncbi.su..> 2008-02-24 20:12 14K nexus.create.ncbi.su..> 2008-02-24 20:12 14K nexus.create.ncbi.su..> 2008-02-24 20:12 15K nexus.create.ncbi.su..> 2008-02-24 20:12 19K nexus.create.ncbi.su..> 2008-02-24 20:12 20K nexus.create.ncbi.tr..> 2008-02-24 20:12 55K nexus.extract.ancest..> 2008-02-24 20:12 11K nexus.extract.ancest..> 2008-02-24 20:12 90K nexus.extract.ancest..> 2008-02-24 20:12 100K nexus.find.init.quar..> 2008-02-24 20:12 15K nexus.find.overall.q..> 2008-02-24 20:12 57K nexus.get.quartets.2.pl 2008-02-24 20:12 742K nexus.get.quartets.2..> 2008-02-24 20:12 1.7K nexus.get.quartets.k..> 2008-02-24 20:12 257K nexus.get.quartets.pl 2008-02-24 20:12 249K nexus.get.quartets.r..> 2008-02-24 20:12 250K nexus.get.quartets.r..> 2008-02-24 20:12 252K nexus.get.quartets.r..> 2008-02-24 20:12 252K nexus.interpret.tree..> 2008-02-24 20:12 251K nexus.make.charset.s..> 2008-02-24 20:12 17K nexus.remove.exclude..> 2008-02-24 20:12 16K nexus.simplify.full...> 2008-02-24 20:12 27K nexus.simplify.full...> 2008-02-24 20:12 36K nexus.simplify.polym..> 2008-02-24 20:12 26K nexus.split.non_meta..> 2008-02-24 20:12 18K nexus.use.recdcm3.su..> 2008-02-24 20:12 238K pdb.get.chains.pl 2008-02-24 20:12 9.2K pdb.nr.embl.swisspro..> 2008-02-24 20:12 9.8K pdb.nr.multiple.pl 2008-02-24 20:12 19K pdb.nr.multiple2.pl 2008-02-24 20:12 32K pdb.replaced.groups.pl 2008-02-24 20:12 8.1K pdb.species.extract.pl 2008-02-24 20:12 19K pdbeast.species.extr..> 2008-02-24 20:12 139K pfam.swissprot.to.pd..> 2008-02-24 20:12 60K process.align.to.cen..> 2008-02-24 20:12 37K process.structural.a..> 2008-02-24 20:12 58K process2.structural...> 2008-02-24 20:12 39K protein.replaced.gro..> 2008-02-24 20:12 54K put.dists.on.tree.pl 2008-02-24 20:12 20K put.together.pdbs.se..> 2008-02-24 20:12 177K put.together.pdbs.se..> 2008-02-24 20:12 180K quartets.to.weights.pl 2008-02-24 20:12 4.1K quartets.to.wr.modif..> 2008-02-24 20:12 7.8K recdcm3.get.subsets.pl 2008-02-24 20:12 729K reformat.gromacs.pdb.pl 2008-02-24 20:12 8.9K reformat.pdb.gromacs.pl 2008-02-24 20:12 12K ring.changes.lsqrms.pl 2008-02-24 20:12 52K rotrans.lsqrms.pl 2008-02-24 20:12 5.2K run.lsqrms.pl 2008-02-24 20:12 27K select.aligned.impor..> 2008-02-24 20:12 96K split.showalign.html.pl 2008-02-24 20:12 4.5K sprot.group.protein...> 2008-02-24 20:12 36K sprot.pdb.DR.extract..> 2008-02-24 20:12 77K sprot.pdb.species.ex..> 2008-02-24 20:12 93K summarize.chain.leng..> 2008-02-24 20:12 41K sump.summarize.pl 2008-02-24 20:12 3.9K sump.summarize2.pl 2008-02-24 20:12 4.5K swissprot.scop.speci..> 2008-02-24 20:12 117K swissprot.species3.f..> 2008-02-24 20:12 101K test.find.quartets.1.pl 2008-02-24 20:12 100K to.gromacs.wrapper.2.pl 2008-02-24 20:12 5.1K transfer.weights.to...> 2008-02-24 20:12 16K tree.simplify.full.pl 2008-02-24 20:12 6.1K use.mrbayes.sump.fre..> 2008-02-24 20:12 17K use.mrbayes.sump.fre..> 2008-02-24 20:12 10K restore.reduce3.remo..> 2008-02-24 20:13 7.6K put.together.pdbs.se..> 2008-02-24 20:13 111K find.residue.correla..> 2008-02-24 20:14 37K find.residue.correla..> 2008-02-24 20:14 37K find.interacting.res.pl 2008-02-24 20:14 23K find.distance.min.ma..> 2008-02-24 20:14 37K create.mkrotscr.muta..> 2008-02-24 20:14 6.9K nexus.add.groups.2.pl 2008-02-24 21:35 53K uniref.to.nr.pl 2008-03-19 16:34 2.3K combine.nr.uniref3.pl 2008-03-19 16:34 25K