TREE 'MyTree0002_Eukaryota' = [&R] (Archaea,Bacteria,(((MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica),(((Monosiga_brevicollis,NCBI_Entire-Group_120),Metazoa),Fungi)),((Viridiplantae,(Rhodella_maculata,NCBI_Entire-Group_292,NCBI_Entire-Group_293),NCBI_Entire-Group_002),((Babesia_bovis,Prorocentrum_micans,Stentor_coeruleus,Uronema_acuminata,MyTree0001_Not_Metazoa-Group_16,MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Group_18,MyTree0001_Not_Metazoa-Group_19,MyTree0001_Not_Metazoa-Toxoplasma_gondii,NCBI_Entire-Group_005,NCBI_Entire-Group_006),(Achlya_bisexualis,NCBI_Entire-Group_003,NCBI_Entire-Group_004)),NCBI_Entire-Group_001))); TREE 'NCBI_MyTree0002_Eukaryota' = [&R] (Archaea,Bacteria,(NCBI_Entire-Group_001,NCBI_Entire-Group_002,((NCBI_Entire-Group_004,Achlya_bisexualis),NCBI_Entire-Group_003),(((NCBI_Entire-Group_005,NCBI_Entire-Group_006),(Uronema_acuminata,MyTree0001_Not_Metazoa-Group_19),Stentor_coeruleus),((MyTree0001_Not_Metazoa-Toxoplasma_gondii,MyTree0001_Not_Metazoa-Group_18),(MyTree0001_Not_Metazoa-Group_16,Babesia_bovis),MyTree0001_Not_Metazoa-Group_17),Prorocentrum_micans),(Metazoa,(Monosiga_brevicollis,NCBI_Entire-Group_120),Fungi),Viridiplantae,(NCBI_Entire-Group_292,(Rhodella_maculata,NCBI_Entire-Group_293)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica)); TREE 'NCBI_Archaea' = [&R] ((((Pyrodictium_occultum,(Aeropyrum_pernix,MyTree0000-Desulfurococcus_amylolyticus)),MyTree0000-Group_1,NCBI_Entire-Group_294),(NCBI_Entire-Group_296,MyTree0000-Group_2,NCBI_Entire-Group_297,MyTree0000-Group_0,NCBI_Entire-Group_298,NCBI_Entire-Group_299,NCBI_Entire-Group_295)),Bacteria,Eukaryota); TREE 'NCBI_Bacteria' = [&R] (Archaea,(NCBI_Entire-Group_301,(Leptospira_interrogans,NCBI_Entire-Group_302),(Persephonella_marina,NCBI_Entire-Group_303),NCBI_Entire-Group_304,(NCBI_Entire-Group_305,(Xylanimicrobium_pachnodae,NCBI_Entire-Group_306,NCBI_Entire-Group_307),NCBI_Entire-Group_308,(NCBI_Entire-Group_310,NCBI_Entire-Group_309)),((((NCBI_Entire-Group_311,Helicobacter_pylori),Nautilia),NCBI_Entire-Group_312),(NCBI_Entire-Group_313,(NCBI_Entire-Group_315,NCBI_Entire-Group_314),NCBI_Entire-Group_316,(NCBI_Entire-Group_318,NCBI_Entire-Group_317),Acinetobacter_calcoaceticus),(NCBI_Entire-Group_319,(NCBI_Entire-Group_320,Rhodospirillum_rubrum),Caulobacter_crescentus,NCBI_Entire-Group_321,(NCBI_Entire-Group_323,NCBI_Entire-Group_322)),((NCBI_Entire-Group_325,NCBI_Entire-Group_324),NCBI_Entire-Group_326),(NCBI_Entire-Group_328,NCBI_Entire-Group_329,NCBI_Entire-Group_330,NCBI_Entire-Group_331,NCBI_Entire-Group_332,NCBI_Entire-Group_333,NCBI_Entire-Group_327)),(NCBI_Entire-Group_334,Prochlorococcus_marinus,NCBI_Entire-Group_335,(Scytonema,NCBI_Entire-Group_336),(NCBI_Entire-Group_338,NCBI_Entire-Group_337),NCBI_Entire-Group_339),NCBI_Entire-Group_300),Eukaryota); -Group_215,MyTree0001_Not_Metazoa-Magnaporthe_grisea,NCBI_Entire-Group_159),(NCBI_Entire-Group_216,Rhizina_undulata,NCBI_Entire-Group_217,NCBI_Entire-Group_218,NCBI_Entire-Group_219,NCBI_Entire-Group_220,NCBI_Entire-Group_221,NCBI_Entire-Group_222),(Gyalecta_jenensis,(Anamylopsora_pulcherrima,NCBI_Entire-Group_223),NCBI_Entire-Group_224,NCBI_Entire-Group_225,NCBI_Entire-Group_226,NCBI_Entire-Group_227,(NCBI_Entire-Group_228,Stictis_radiata),((NCBI_Entire-Group_230,NCBI_Entire-Group_229),(NCBI_Entire-Group_232,NCBI_Entire-Group_233,NCBI_Entire-Group_234,NCBI_Entire-Group_235,NCBI_Entire-Group_231))),((NCBI_Entire-Group_236,NCBI_Entire-Group_237,MyTree0001_Not_Metazoa-Coccidioides_immitis),(NCBI_Entire-Group_238,MyTree0001_Not_Metazoa-Group_5)),((NCBI_Entire-Group_241,NCBI_Entire-Group_240),NCBI_Entire-Group_239),(NCBI_Entire-Group_242,Arthonia_radiata)),NCBI_Entire-Group_243,NCBI_Entire-Group_244,NCBI_Entire-Group_245,Schizosaccharomyces_pombe,(NCBI_Entire-Group_247,(Kluyveromyces_lactis,MyTree0001_Not_Metazoa-Group_10),MyTree0001_Not_Metazoa-Group_0,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6),((Furculomyces_boomerangus,NCBI_Entire-Group_248),(NCBI_Entire-Group_249,Endogone_pisiformis,NCBI_Entire-Group_250,NCBI_Entire-Group_251,(Umbelopsis,NCBI_Entire-Group_252))),(NCBI_Entire-Group_254,NCBI_Entire-Group_253))),((NCBI_Entire-Group_256,NCBI_Entire-Group_257,((((((((NCBI_Entire-Group_260,MyTree0001_Not_Metazoa-Group_12),NCBI_Entire-Group_259),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),(((NCBI_Entire-Group_262,NCBI_Entire-Group_263,((NCBI_Entire-Group_265,NCBI_Entire-Group_266,NCBI_Entire-Group_264),(NCBI_Entire-Group_268,NCBI_Entire-Group_269,NCBI_Entire-Group_267)),NCBI_Entire-Group_261),(Ipomoea_nil,NCBI_Entire-Group_270)),MyTree0001_Not_Metazoa-Daucus_carota),Arceuthobium_verticilliflorum,NCBI_Entire-Group_271),MyTree0001_Not_Metazoa-Group_13),Ginkgo_biloba),Anemia_phyllitidis),NCBI_Entire-Group_258)),((NCBI_Entire-Group_273,NCBI_Entire-Group_272),(((NCBI_Entire-Group_276,NCBI_Entire-Group_277,Chlorella_kessleri),(NCBI_Entire-Group_279,NCBI_Entire-Group_278),NCBI_Entire-Group_275),NCBI_Entire-Group_280,(NCBI_Entire-Group_282,NCBI_Entire-Group_281),NCBI_Entire-Group_274),(NCBI_Entire-Group_283,(Pseudoscourfieldia_marina,NCBI_Entire-Group_284))),NCBI_Entire-Group_255),(NCBI_Entire-Group_286,NCBI_Entire-Group_285),(NCBI_Entire-Group_287,Giardia_lamblia),((NCBI_Entire-Group_288,Holomastigotoides_mirabile),((NCBI_Entire-Group_289,Tritrichomonas_foetus),NCBI_Entire-Group_290,Devescovina)),NCBI_Entire-Group_291,(NCBI_Entire-Group_292,(Rhodella_maculata,NCBI_Entire-Group_293)),MyTree0001_Not_Metazoa-Entamoeba_histolytica)); TREE 'NCBI_Fungi' = [&R] (Not_Fungi,(NCBI_Entire-Group_121,(Ameson_michaelis,MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi),(((NCBI_Entire-Group_125,NCBI_Entire-Group_124),((NCBI_Entire-Group_127,Kondoa_malvinella),NCBI_Entire-Group_126),(NCBI_Entire-Group_129,(NCBI_Entire-Group_131,NCBI_Entire-Group_130),NCBI_Entire-Group_128),NCBI_Entire-Group_123),(((NCBI_Entire-Group_132,(NCBI_Entire-Group_134,NCBI_Entire-Group_135,NCBI_Entire-Group_136,NCBI_Entire-Group_133)),(Phaffia_rhodozyma,MyTree0001_Not_Metazoa-Cryptococcus_neoformans,NCBI_Entire-Group_137)),((NCBI_Entire-Group_140,NCBI_Entire-Group_139),NCBI_Entire-Group_141,NCBI_Entire-Group_142,(NCBI_Entire-Group_144,NCBI_Entire-Group_143),(NCBI_Entire-Group_145,NCBI_Entire-Group_146,MyTree0001_Not_Metazoa-Group_8),(NCBI_Entire-Group_148,NCBI_Entire-Group_149,NCBI_Entire-Group_150,NCBI_Entire-Group_151,((NCBI_Entire-Group_153,NCBI_Entire-Group_154,NCBI_Entire-Group_155),MyTree0001_Not_Metazoa-Group_9,NCBI_Entire-Group_152),NCBI_Entire-Group_147),NCBI_Entire-Group_138)),MyTree0001_Not_Metazoa-Ustilago_maydis,NCBI_Entire-Group_122),(NCBI_Entire-Group_156,(NCBI_Entire-Group_157,(Laboulbeniopsis_termitarius,(NCBI_Entire-Group_158,Pyxidiophora)),((NCBI_Entire-Group_161,NCBI_Entire-Group_162,NCBI_Entire-Group_163,NCBI_Entire-Group_164,NCBI_Entire-Group_165,NCBI_Entire-Group_160),((Ceratosphaeria_lampadophora,NCBI_Entire-Group_166,(NCBI_Entire-Group_168,NCBI_Entire-Group_169,NCBI_Entire-Group_170,NCBI_Entire-Group_167),NCBI_Entire-Group_171,(NCBI_Entire-Group_172,NCBI_Entire-Group_173,MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),(NCBI_Entire-Group_175,(NCBI_Entire-Group_177,NCBI_Entire-Group_176),NCBI_Entire-Group_178,NCBI_Entire-Group_174)),NCBI_Entire-Group_179,(MyTree0001_Not_Metazoa-Group_4,((MyTree0001_Not_Metazoa-Group_3,MyTree0001_Not_Metazoa-Group_7,NCBI_Entire-Group_182),NCBI_Entire-Group_181),NCBI_Entire-Group_183,((MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_185),NCBI_Entire-Group_184),NCBI_Entire-Group_180)),((NCBI_Entire-Group_186,NCBI_Entire-Group_187),Cyttaria_darwinii,(NCBI_Entire-Group_189,NCBI_Entire-Group_190,NCBI_Entire-Group_191,NCBI_Entire-Group_192,NCBI_Entire-Group_193,NCBI_Entire-Group_194,NCBI_Entire-Group_195,NCBI_Entire-Group_196,NCBI_Entire-Group_188)),(NCBI_Entire-Group_198,(NCBI_Entire-Group_199,Coccodinium_bartschii),(NCBI_Entire-Group_201,((Cucurbitaria_elongata,Cucurbitaria_berberidis,Curreya_pityophila),Lojkania_enalia,NCBI_Entire-Group_203,NCBI_Entire-Group_204,NCBI_Entire-Group_205,NCBI_Entire-Group_206,NCBI_Entire-Group_207,NCBI_Entire-Group_208),NCBI_Entire-Group_209,NCBI_Entire-Group_210,NCBI_Entire-Group_211,NCBI_Entire-Group_212,NCBI_Entire-Group_213,NCBI_Entire-Group_200),NCBI_Entire-Group_197),NCBI_Entire-Group_214,NCBI_Entire-Group_215,MyTree0001_Not_Metazoa-Magnaporthe_grisea,NCBI_Entire-Group_159),(NCBI_Entire-Group_216,Rhizina_undulata,NCBI_Entire-Group_217,NCBI_Entire-Group_218,NCBI_Entire-Group_219,NCBI_Entire-Group_220,NCBI_Entire-Group_221,NCBI_Entire-Group_222),(Gyalecta_jenensis,(Anamylopsora_pulcherrima,NCBI_Entire-Group_223),NCBI_Entire-Group_224,NCBI_Entire-Group_225,NCBI_Entire-Group_226,NCBI_Entire-Group_227,(NCBI_Entire-Group_228,Stictis_radiata),((NCBI_Entire-Group_230,NCBI_Entire-Group_229),(NCBI_Entire-Group_232,NCBI_Entire-Group_233,NCBI_Entire-Group_234,NCBI_Entire-Group_235,NCBI_Entire-Group_231))),((NCBI_Entire-Group_236,NCBI_Entire-Group_237,MyTree0001_Not_Metazoa-Coccidioides_immitis),(NCBI_Entire-Group_238,MyTree0001_Not_Metazoa-Group_5)),((NCBI_Entire-Group_241,NCBI_Entire-Group_240),NCBI_Entire-Group_239),(NCBI_Entire-Group_242,Arthonia_radiata)),NCBI_Entire-Group_243,NCBI_Entire-Group_244,NCBI_Entire-Group_245,Schizosaccharomyces_pombe,(NCBI_Entire-Group_247,(Kluyveromyces_lactis,MyTree0001_Not_Metazoa-Group_10),MyTree0001_Not_Metazoa-Group_0,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6),((Furculomyces_boomerangus,NCBI_Entire-Group_248),(NCBI_Entire-Group_249,Endogone_pisiformis,NCBI_Entire-Group_250,NCBI_Entire-Group_251,(Umbelopsis,NCBI_Entire-Group_252))),(NCBI_Entire-Group_254,NCBI_Entire-Group_253))); TREE 'NCBI_Metazoa' = [&R] (Not_Metazoa,(((((Saccoglossus_kowalevskii,(((((((MyTree0001_Metazoa-Oncorhynchus_mykiss,(MyTree0001_Metazoa-Group_13,Gadus_morhua)),(MyTree0001_Metazoa-Danio_rerio,Catostomus_commersoni)),Anguilla_anguilla),(((((((((MyTree0001_Metazoa-Group_11,Bos_taurus),Odocoileus_virginianus),Tragulus_napu),NCBI_Entire-Group_008,MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa),(NCBI_Entire-Group_009,NCBI_Entire-Group_010),NCBI_Entire-Group_011,(((NCBI_Entire-Group_013,NCBI_Entire-Group_014),(NCBI_Entire-Group_016,NCBI_Entire-Group_017,NCBI_Entire-Group_018,NCBI_Entire-Group_019,NCBI_Entire-Group_020,NCBI_Entire-Group_021,MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6,NCBI_Entire-Group_015),NCBI_Entire-Group_012),(NCBI_Entire-Group_022,MyTree0001_Metazoa-Cavia_porcellus)),Ochotona_princeps,(Tapirus_pinchaque,NCBI_Entire-Group_023),NCBI_Entire-Group_024,(((MyTree0001_Metazoa-Group_7,Pongo_pygmaeus),Hylobates_lar,(NCBI_Entire-Group_025,MyTree0001_Metazoa-Group_8)),(Aotus_trivirgatus,MyTree0001_Metazoa-Group_9),Tarsius_bancanus,(NCBI_Entire-Group_027,NCBI_Entire-Group_028,NCBI_Entire-Group_029,MyTree0001_Metazoa-Nycticebus_coucang,NCBI_Entire-Group_030,NCBI_Entire-Group_026)),NCBI_Entire-Group_031,NCBI_Entire-Group_032,MyTree0001_Metazoa-Group_12,NCBI_Entire-Group_007),(MyTree0001_Metazoa-Didelphis_marsupialis,Sminthopsis_douglasi)),(((((NCBI_Entire-Group_033,((Cordylus_cordylus,NCBI_Entire-Group_034),NCBI_Entire-Group_035,NCBI_Entire-Group_036),((Agkistrodon_piscivorus,NCBI_Entire-Group_038),NCBI_Entire-Group_037),(NCBI_Entire-Group_040,NCBI_Entire-Group_039),(NCBI_Entire-Group_042,NCBI_Entire-Group_041)),((Chamaeleo_jacksonii,(NCBI_Entire-Group_044,NCBI_Entire-Group_043)),(NCBI_Entire-Group_046,NCBI_Entire-Group_047,NCBI_Entire-Group_048,NCBI_Entire-Group_045))),Sphenodon_punctatus),((((Ortalis_cinereiceps,(Meleagris_gallopavo,MyTree0001_Metazoa-Group_5)),(Anseranas_semipalmata,NCBI_Entire-Group_050),NCBI_Entire-Group_049),(Struthio_camelus,NCBI_Entire-Group_051)),(NCBI_Entire-Group_052,MyTree0001_Metazoa-Alligator_mississippiensis,NCBI_Entire-Group_053))),(Pelomedusa_subrufa,MyTree0001_Metazoa-Chelonia_mydas))),((((Scaphiopus_holbrooki,MyTree0001_Metazoa-Group_15),(Gastrophryne_carolinensis,NCBI_Entire-Group_054),Discoglossus_pictus),(NCBI_Entire-Group_056,NCBI_Entire-Group_055)),(NCBI_Entire-Group_058,NCBI_Entire-Group_057))),MyTree0001_Metazoa-Latimeria_chalumnae)),Galeocerdo_cuvier),MyTree0001_Metazoa-Group_4),Branchiostoma_floridae,(Oikopleura_dioica,NCBI_Entire-Group_059,((Botryllus,NCBI_Entire-Group_060,NCBI_Entire-Group_061,NCBI_Entire-Group_062),(NCBI_Entire-Group_064,NCBI_Entire-Group_065,NCBI_Entire-Group_066,NCBI_Entire-Group_063))))),(((NCBI_Entire-Group_068,Riftia_pachyptila),NCBI_Entire-Group_069,(((NCBI_Entire-Group_070,NCBI_Entire-Group_071),(NCBI_Entire-Group_073,NCBI_Entire-Group_072)),(NCBI_Entire-Group_074,Hrabeiella_periglandulata,((NCBI_Entire-Group_076,NCBI_Entire-Group_075),((NCBI_Entire-Group_078,NCBI_Entire-Group_079,NCBI_Entire-Group_077),NCBI_Entire-Group_080)),(NCBI_Entire-Group_081,Ophelia_rathkei,NCBI_Entire-Group_082)))),((Notosaria_nigricans,((Terebratalia_transversa,NCBI_Entire-Group_083),(NCBI_Entire-Group_084,NCBI_Entire-Group_085,Dyscolia))),Phoronis),(((((NCBI_Entire-Group_087,NCBI_Entire-Group_088),NCBI_Entire-Group_089,NCBI_Entire-Group_090,((MyTree0001_Metazoa-Group_3,Tabanus_sudeticus),(NCBI_Entire-Group_091,(NCBI_Entire-Group_092,Psychoda_cinerea),((NCBI_Entire-Group_093,Chironomus_tentans),(Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0))),(Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)))),MyTree0001_Metazoa-Group_1,NCBI_Entire-Group_086),MyTree0001_Metazoa-Bemisia_argentifolii,Blattella_germanica),NCBI_Entire-Group_096),(NCBI_Entire-Group_097,MyTree0001_Metazoa-Ixodes_scapularis)),(NCBI_Entire-Group_098,MyTree0001_Metazoa-Ommastrephes_sloani,(NCBI_Entire-Group_099,NCBI_Entire-Group_100),((MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_101),Limicolaria_kambeul)),NCBI_Entire-Group_102,NCBI_Entire-Group_067)),((MyTree0001_Metazoa-Onchocerca_volvulus,Ascaris_lumbricoides,(MyTree0001_Metazoa-Group_2,(Nematodirus_battus,MyTree0001_Metazoa-Heligmosomoides_polygyrus))),Lepidodermella_squammata,NCBI_Entire-Group_103,NCBI_Entire-Group_104),(Echinococcus_granulosus,(MyTree0001_Metazoa-Group_16,NCBI_Entire-Group_105))),Mnemiopsis_leidyi,(NCBI_Entire-Group_106,((Nematostella,NCBI_Entire-Group_108),NCBI_Entire-Group_107),NCBI_Entire-Group_109)),(NCBI_Entire-Group_110,((NCBI_Entire-Group_111,(NCBI_Entire-Group_113,NCBI_Entire-Group_114,NCBI_Entire-Group_112)),(NCBI_Entire-Group_116,NCBI_Entire-Group_117,NCBI_Entire-Group_115)),(Suberites_ficus,(NCBI_Entire-Group_119,NCBI_Entire-Group_118))))); TREE 'NCBI_Not_Fungi_Metazoa_Viridiplantae' = [&R] (Archaea,Bacteria,(Viridiplantae,NCBI_Entire-Group_000,MyTree0001_Not_Metazoa-Dictyostelium_discoideum,NCBI_Entire-Group_001,NCBI_Entire-Group_002,((MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15),Euglena_gracilis),((NCBI_Entire-Group_004,Achlya_bisexualis),NCBI_Entire-Group_003),(((NCBI_Entire-Group_005,NCBI_Entire-Group_006),(Uronema_acuminata,MyTree0001_Not_Metazoa-Group_19),Stentor_coeruleus),((MyTree0001_Not_Metazoa-Toxoplasma_gondii,MyTree0001_Not_Metazoa-Group_18),(MyTree0001_Not_Metazoa-Group_16,Babesia_bovis),MyTree0001_Not_Metazoa-Group_17),Prorocentrum_micans),(Metazoa,Fungi,(Monosiga_brevicollis,NCBI_Entire-Group_120)),(NCBI_Entire-Group_286,NCBI_Entire-Group_285),(NCBI_Entire-Group_287,Giardia_lamblia),((NCBI_Entire-Group_288,Holomastigotoides_mirabile),((NCBI_Entire-Group_289,Tritrichomonas_foetus),NCBI_Entire-Group_290,Devescovina)),NCBI_Entire-Group_291,(NCBI_Entire-Group_292,(Rhodella_maculata,NCBI_Entire-Group_293)),MyTree0001_Not_Metazoa-Entamoeba_histolytica)); TREE 'NCBI_Not_Metazoa' = [&R] (Archaea,Bacteria,(NCBI_Entire-Group_000,MyTree0001_Not_Metazoa-Dictyostelium_discoideum,NCBI_Entire-Group_001,NCBI_Entire-Group_002,((MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15),Euglena_gracilis),((NCBI_Entire-Group_004,Achlya_bisexualis),NCBI_Entire-Group_003),(((NCBI_Entire-Group_005,NCBI_Entire-Group_006),(Uronema_acuminata,MyTree0001_Not_Metazoa-Group_19),Stentor_coeruleus),((MyTree0001_Not_Metazoa-Toxoplasma_gondii,MyTree0001_Not_Metazoa-Group_18),(MyTree0001_Not_Metazoa-Group_16,Babesia_bovis),MyTree0001_Not_Metazoa-Group_17),Prorocentrum_micans),(Metazoa,(Monosiga_brevicollis,NCBI_Entire-Group_120),(NCBI_Entire-Group_121,(Ameson_michaelis,MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi),(((NCBI_Entire-Group_125,NCBI_Entire-Group_124),((NCBI_Entire-Group_127,Kondoa_malvinella),NCBI_Entire-Group_126),(NCBI_Entire-Group_129,(NCBI_Entire-Group_131,NCBI_Entire-Group_130),NCBI_Entire-Group_128),NCBI_Entire-Group_123),(((NCBI_Entire-Group_132,(NCBI_Entire-Group_134,NCBI_Entire-Group_135,NCBI_Entire-Group_136,NCBI_Entire-Group_133)),(Phaffia_rhodozyma,MyTree0001_Not_Metazoa-Cryptococcus_neoformans,NCBI_Entire-Group_137)),((NCBI_Entire-Group_140,NCBI_Entire-Group_139),NCBI_Entire-Group_141,NCBI_Entire-Group_142,(NCBI_Entire-Group_144,NCBI_Entire-Group_143),(NCBI_Entire-Group_145,NCBI_Entire-Group_146,MyTree0001_Not_Metazoa-Group_8),(NCBI_Entire-Group_148,NCBI_Entire-Group_149,NCBI_Entire-Group_150,NCBI_Entire-Group_151,((NCBI_Entire-Group_153,NCBI_Entire-Group_154,NCBI_Entire-Group_155),MyTree0001_Not_Metazoa-Group_9,NCBI_Entire-Group_152),NCBI_Entire-Group_147),NCBI_Entire-Group_138)),MyTree0001_Not_Metazoa-Ustilago_maydis,NCBI_Entire-Group_122),(NCBI_Entire-Group_156,(NCBI_Entire-Group_157,(Laboulbeniopsis_termitarius,(NCBI_Entire-Group_158,Pyxidiophora)),((NCBI_Entire-Group_161,NCBI_Entire-Group_162,NCBI_Entire-Group_163,NCBI_Entire-Group_164,NCBI_Entire-Group_165,NCBI_Entire-Group_160),((Ceratosphaeria_lampadophora,NCBI_Entire-Group_166,(NCBI_Entire-Group_168,NCBI_Entire-Group_169,NCBI_Entire-Group_170,NCBI_Entire-Group_167),NCBI_Entire-Group_171,(NCBI_Entire-Group_172,NCBI_Entire-Group_173,MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),(NCBI_Entire-Group_175,(NCBI_Entire-Group_177,NCBI_Entire-Group_176),NCBI_Entire-Group_178,NCBI_Entire-Group_174)),NCBI_Entire-Group_179,(MyTree0001_Not_Metazoa-Group_4,((MyTree0001_Not_Metazoa-Group_3,MyTree0001_Not_Metazoa-Group_7,NCBI_Entire-Group_182),NCBI_Entire-Group_181),NCBI_Entire-Group_183,((MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_185),NCBI_Entire-Group_184),NCBI_Entire-Group_180)),((NCBI_Entire-Group_186,NCBI_Entire-Group_187),Cyttaria_darwinii,(NCBI_Entire-Group_189,NCBI_Entire-Group_190,NCBI_Entire-Group_191,NCBI_Entire-Group_192,NCBI_Entire-Group_193,NCBI_Entire-Group_194,NCBI_Entire-Group_195,NCBI_Entire-Group_196,NCBI_Entire-Group_188)),(NCBI_Entire-Group_198,(NCBI_Entire-Group_199,Coccodinium_bartschii),(NCBI_Entire-Group_201,((Cucurbitaria_elongata,Cucurbitaria_berberidis,Curreya_pityophila),Lojkania_enalia,NCBI_Entire-Group_203,NCBI_Entire-Group_204,NCBI_Entire-Group_205,NCBI_Entire-Group_206,NCBI_Entire-Group_207,NCBI_Entire-Group_208),NCBI_Entire-Group_209,NCBI_Entire-Group_210,NCBI_Entire-Group_211,NCBI_Entire-Group_212,NCBI_Entire-Group_213,NCBI_Entire-Group_200),NCBI_Entire-Group_197),NCBI_Entire-Group_214,NCBI_Entire-Group_215,MyTree0001_Not_Metazoa-Magnaporthe_grisea,NCBI_Entire-Group_159),(NCBI_Entire-Group_216,Rhizina_undulata,NCBI_Entire-Group_217,NCBI_Entire-Group_218,NCBI_Entire-Group_219,NCBI_Entire-Group_220,NCBI_Entire-Group_221,NCBI_Entire-Group_222),(Gyalecta_jenensis,(Anamylopsora_pulcherrima,NCBI_Entire-Group_223),NCBI_Entire-Group_224,NCBI_Entire-Group_225,NCBI_Entire-Group_226,NCBI_Entire-Group_227,(NCBI_Entire-Group_228,Stictis_radiata),((NCBI_Entire-Group_230,NCBI_Entire-Group_229),(NCBI_Entire-Group_232,NCBI_Entire-Group_233,NCBI_Entire-Group_234,NCBI_Entire-Group_235,NCBI_Entire-Group_231))),((NCBI_Entire-Group_236,NCBI_Entire-Group_237,MyTree0001_Not_Metazoa-Coccidioides_immitis),(NCBI_Entire-Group_238,MyTree0001_Not_Metazoa-Group_5)),((NCBI_Entire-Group_241,NCBI_Entire-Group_240),NCBI_Entire-Group_239),(NCBI_Entire-Group_242,Arthonia_radiata)),NCBI_Entire-Group_243,NCBI_Entire-Group_244,NCBI_Entire-Group_245,Schizosaccharomyces_pombe,(NCBI_Entire-Group_247,(Kluyveromyces_lactis,MyTree0001_Not_Metazoa-Group_10),MyTree0001_Not_Metazoa-Group_0,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6),((Furculomyces_boomerangus,NCBI_Entire-Group_248),(NCBI_Entire-Group_249,Endogone_pisiformis,NCBI_Entire-Group_250,NCBI_Entire-Group_251,(Umbelopsis,NCBI_Entire-Group_252))),(NCBI_Entire-Group_254,NCBI_Entire-Group_253))),((NCBI_Entire-Group_256,NCBI_Entire-Group_257,((((((((NCBI_Entire-Group_260,MyTree0001_Not_Metazoa-Group_12),NCBI_Entire-Group_259),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),(((NCBI_Entire-Group_262,NCBI_Entire-Group_263,((NCBI_Entire-Group_265,NCBI_Entire-Group_266,NCBI_Entire-Group_264),(NCBI_Entire-Group_268,NCBI_Entire-Group_269,NCBI_Entire-Group_267)),NCBI_Entire-Group_261),(Ipomoea_nil,NCBI_Entire-Group_270)),MyTree0001_Not_Metazoa-Daucus_carota),Arceuthobium_verticilliflorum,NCBI_Entire-Group_271),MyTree0001_Not_Metazoa-Group_13),Ginkgo_biloba),Anemia_phyllitidis),NCBI_Entire-Group_258)),((NCBI_Entire-Group_273,NCBI_Entire-Group_272),(((NCBI_Entire-Group_276,NCBI_Entire-Group_277,Chlorella_kessleri),(NCBI_Entire-Group_279,NCBI_Entire-Group_278),NCBI_Entire-Group_275),NCBI_Entire-Group_280,(NCBI_Entire-Group_282,NCBI_Entire-Group_281),NCBI_Entire-Group_274),(NCBI_Entire-Group_283,(Pseudoscourfieldia_marina,NCBI_Entire-Group_284))),NCBI_Entire-Group_255),(NCBI_Entire-Group_286,NCBI_Entire-Group_285),(NCBI_Entire-Group_287,Giardia_lamblia),((NCBI_Entire-Group_288,Holomastigotoides_mirabile),((NCBI_Entire-Group_289,Tritrichomonas_foetus),NCBI_Entire-Group_290,Devescovina)),NCBI_Entire-Group_291,(NCBI_Entire-Group_292,(Rhodella_maculata,NCBI_Entire-Group_293)),MyTree0001_Not_Metazoa-Entamoeba_histolytica)); TREE 'NCBI_Viridiplantae' = [&R] (Not_Viridiplantae,((NCBI_Entire-Group_256,NCBI_Entire-Group_257,((((((((NCBI_Entire-Group_260,MyTree0001_Not_Metazoa-Group_12),NCBI_Entire-Group_259),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),(((NCBI_Entire-Group_262,NCBI_Entire-Group_263,((NCBI_Entire-Group_265,NCBI_Entire-Group_266,NCBI_Entire-Group_264),(NCBI_Entire-Group_268,NCBI_Entire-Group_269,NCBI_Entire-Group_267)),NCBI_Entire-Group_261),(Ipomoea_nil,NCBI_Entire-Group_270)),MyTree0001_Not_Metazoa-Daucus_carota),Arceuthobium_verticilliflorum,NCBI_Entire-Group_271),MyTree0001_Not_Metazoa-Group_13),Ginkgo_biloba),Anemia_phyllitidis),NCBI_Entire-Group_258)),((NCBI_Entire-Group_273,NCBI_Entire-Group_272),(((NCBI_Entire-Group_276,NCBI_Entire-Group_277,Chlorella_kessleri),(NCBI_Entire-Group_279,NCBI_Entire-Group_278),NCBI_Entire-Group_275),NCBI_Entire-Group_280,(NCBI_Entire-Group_282,NCBI_Entire-Group_281),NCBI_Entire-Group_274),(NCBI_Entire-Group_283,(Pseudoscourfieldia_marina,NCBI_Entire-Group_284))),NCBI_Entire-Group_255)); TREE 'Tree1016_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Urocyon_cinereoargenteus,(Nyctereutes_procyonoides,(Otocyon_megalotis,(((Vulpes_vulpes,Vulpes_macrotis),Vulpes_zerda),(((Speothos_venaticus,Chrysocyon_brachyurus),(Lycaon_pictus,(Canis_adustus,((Canis_mesomelas,(Canis_lupus,Canis_simensis)),Cuon_alpinus)))),(((Pseudalopex_griseus,(Pseudalopex_gymnocercus,(Pseudalopex_sechurae,(Pseudalopex_culpaeus,Pseudalopex_vetulus)))),Atelocynus_microtis),Cerdocyon_thous)))))),NCBI_Entire-Group_009)))); TREE 'NCBI_Tree1016_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Atelocynus_microtis,Canis_adustus,Canis_lupus,Canis_mesomelas,Canis_simensis,Cerdocyon_thous,Chrysocyon_brachyurus,Cuon_alpinus,Lycaon_pictus,Nyctereutes_procyonoides,Otocyon_megalotis,Pseudalopex_culpaeus,Pseudalopex_griseus,Pseudalopex_gymnocercus,Pseudalopex_sechurae,Pseudalopex_vetulus,Speothos_venaticus,Urocyon_cinereoargenteus,Vulpes_macrotis,Vulpes_vulpes,Vulpes_zerda),NCBI_Entire-Group_009)))); TREE 'Tree1018_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_0,Chironomus_tentans,NCBI_Entire-Group_093),NCBI_Entire-Group_091,Psychoda_cinerea,(Dilophus_febrilis,NCBI_Entire-Group_094,NCBI_Entire-Group_095),(Tabanus_sudeticus,MyTree0001_Metazoa-Group_3),NCBI_Entire-Group_092)))); TREE 'NCBI_Tree1018_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Dilophus_febrilis,(NCBI_Entire-Group_094,NCBI_Entire-Group_095)),((Chironomus_tentans,NCBI_Entire-Group_093),MyTree0001_Metazoa-Group_0),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091),(Tabanus_sudeticus,MyTree0001_Metazoa-Group_3))))); TREE 'Tree1021_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((((Tabanus_sudeticus,MyTree0001_Metazoa-Group_3),Psychoda_cinerea),((NCBI_Entire-Group_095,Dilophus_febrilis,NCBI_Entire-Group_094),((MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_093),Chironomus_tentans))),NCBI_Entire-Group_092),NCBI_Entire-Group_091),MyTree0001_Metazoa-Group_1),NCBI_Entire-Group_086)))); TREE 'NCBI_Tree1021_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Dilophus_febrilis,(NCBI_Entire-Group_094,NCBI_Entire-Group_095)),((Chironomus_tentans,NCBI_Entire-Group_093),MyTree0001_Metazoa-Group_0),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091),(Tabanus_sudeticus,MyTree0001_Metazoa-Group_3)),MyTree0001_Metazoa-Group_1,NCBI_Entire-Group_086)))); TREE 'Tree1057_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((MyTree0001_Metazoa-Alligator_mississippiensis,NCBI_Entire-Group_053),NCBI_Entire-Group_052),NCBI_Entire-Group_099),NCBI_Entire-Group_051)))); TREE 'NCBI_Tree1057_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((MyTree0001_Metazoa-Alligator_mississippiensis,NCBI_Entire-Group_053,NCBI_Entire-Group_052),NCBI_Entire-Group_051),NCBI_Entire-Group_099)))); TREE 'Tree1118_Metazoa' = [&R] (((((Nyctereutes_procyonoides,(Speothos_venaticus,Lycaon_pictus,(Pseudalopex_vetulus,(Pseudalopex_sechurae,Pseudalopex_gymnocercus,Pseudalopex_griseus,Pseudalopex_culpaeus)),Cuon_alpinus,Chrysocyon_brachyurus,Cerdocyon_thous,((Canis_simensis,Canis_lupus),(Canis_mesomelas,Canis_adustus)),Atelocynus_microtis)),(Otocyon_megalotis,((Urocyon_littoralis,Urocyon_cinereoargenteus),(Vulpes_chama,(Vulpes_zerda,((Vulpes_vulpes,Vulpes_corsac),(Vulpes_velox,Alopex_lagopus))))))),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree1118_Metazoa' = [&R] ((((Vulpes_zerda,Vulpes_vulpes,Vulpes_velox,Vulpes_corsac,Vulpes_chama,Urocyon_littoralis,Urocyon_cinereoargenteus,Speothos_venaticus,Pseudalopex_vetulus,Pseudalopex_sechurae,Pseudalopex_gymnocercus,Pseudalopex_griseus,Pseudalopex_culpaeus,Otocyon_megalotis,Nyctereutes_procyonoides,Lycaon_pictus,Cuon_alpinus,Chrysocyon_brachyurus,Cerdocyon_thous,Canis_simensis,Canis_mesomelas,Canis_lupus,Canis_adustus,Atelocynus_microtis,Alopex_lagopus),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'Tree1172.1_Viridiplantae' = [&R] (Archaea,Bacteria,((Fungi,Metazoa),(((NCBI_Entire-Group_281,NCBI_Entire-Group_282),NCBI_Entire-Group_283),(((Anemia_phyllitidis,((Sorghum_bicolor,(((Nicotiana_tabacum,(Glycine_max,Solanum_tuberosum)),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),NCBI_Entire-Group_261)),((Oryza_sativa,(Pisum_sativum,MyTree0001_Not_Metazoa-Daucus_carota)),Zea_mays))),NCBI_Entire-Group_256),NCBI_Entire-Group_255)))); TREE 'NCBI_Tree1172.1_Viridiplantae' = [&R] (Archaea,Bacteria,((((Anemia_phyllitidis,((Oryza_sativa,(Sorghum_bicolor,Zea_mays)),((((Nicotiana_tabacum,Solanum_tuberosum),NCBI_Entire-Group_261),MyTree0001_Not_Metazoa-Daucus_carota),((Glycine_max,Pisum_sativum),MyTree0001_Not_Metazoa-Arabidopsis_thaliana)))),NCBI_Entire-Group_256),((NCBI_Entire-Group_281,NCBI_Entire-Group_282),NCBI_Entire-Group_283),NCBI_Entire-Group_255),(Fungi,Metazoa))); TREE 'Tree1172.2_Viridiplantae' = [&R] (Archaea,Bacteria,((Fungi,Metazoa),(((NCBI_Entire-Group_281,NCBI_Entire-Group_282),NCBI_Entire-Group_283),(((Anemia_phyllitidis,((Sorghum_bicolor,((NCBI_Entire-Group_270,MyTree0001_Not_Metazoa-Arabidopsis_thaliana),NCBI_Entire-Group_261)),((Oryza_sativa,(MyTree0001_Not_Metazoa-Group_12,MyTree0001_Not_Metazoa-Daucus_carota)),Zea_mays))),NCBI_Entire-Group_256),NCBI_Entire-Group_255)))); TREE 'NCBI_Tree1172.2_Viridiplantae' = [&R] (Archaea,Bacteria,((((Anemia_phyllitidis,((Oryza_sativa,(Sorghum_bicolor,Zea_mays)),(((NCBI_Entire-Group_270,NCBI_Entire-Group_261),MyTree0001_Not_Metazoa-Daucus_carota),(MyTree0001_Not_Metazoa-Group_12,MyTree0001_Not_Metazoa-Arabidopsis_thaliana)))),NCBI_Entire-Group_256),((NCBI_Entire-Group_281,NCBI_Entire-Group_282),NCBI_Entire-Group_283),NCBI_Entire-Group_255),(Fungi,Metazoa))); TREE 'Tree1173_Eukaryota' = [&R] (Archaea,Bacteria,(Fungi,(((Mnemiopsis_leidyi,NCBI_Entire-Group_112),NCBI_Entire-Group_108),((((Nematodirus_battus,MyTree0001_Metazoa-Heligmosomoides_polygyrus),(Caenorhabditis_elegans,Caenorhabditis_briggsae)),Pellioditis_typica),((((Lepidodermella_squammata,NCBI_Entire-Group_105),(NCBI_Entire-Group_103,NCBI_Entire-Group_104),((Limicolaria_kambeul,NCBI_Entire-Group_098),NCBI_Entire-Group_073,NCBI_Entire-Group_076,NCBI_Entire-Group_100)),(((MyTree0001_Metazoa-Group_1,NCBI_Entire-Group_096),NCBI_Entire-Group_097),NCBI_Entire-Group_067)),((Saccoglossus_kowalevskii,(MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_7)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus)))))); TREE 'NCBI_Tree1173_Eukaryota' = [&R] ((Fungi,((NCBI_Entire-Group_108,((((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_7),Saccoglossus_kowalevskii),(((MyTree0001_Metazoa-Group_1,NCBI_Entire-Group_096),NCBI_Entire-Group_097),((Limicolaria_kambeul,MyTree0001_Metazoa-Strongylocentrotus_purpuratus),NCBI_Entire-Group_098,NCBI_Entire-Group_100),(NCBI_Entire-Group_073,NCBI_Entire-Group_076),NCBI_Entire-Group_067)),(((Nematodirus_battus,MyTree0001_Metazoa-Heligmosomoides_polygyrus),(Pellioditis_typica,Caenorhabditis_elegans,Caenorhabditis_briggsae)),NCBI_Entire-Group_103,NCBI_Entire-Group_104,Lepidodermella_squammata),NCBI_Entire-Group_105),Mnemiopsis_leidyi),NCBI_Entire-Group_112)),Bacteria,Archaea); TREE 'Tree1184_Fungi' = [&R] ((((Stropharia_coronilla,(Cystolepiota_cystidiosa,(Lepiota_felina,((Leucocoprinus_cepaestipes,(Leucoagaricus_naucinus,Melanophyllum_haematospermum)),(Chlorophyllum_molybdites,((((Agaricus_maskae,Agaricus_lanipes),(Agaricus_semotus,(Agaricus_arvensis,(Agaricus_abruptibulbus,Agaricus_silvicola)))),Agaricus_campestris),((Agaricus_xanthoderma,Agaricus_sylvaticus),(((Agaricus_impudicus,Agaricus_bitorquis),((Agaricus_spissicaulis,Agaricus_bisporus),(Agaricus_devoniensis,Agaricus_subperonatus))),Agaricus_bernardii)))))))),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree1184_Fungi' = [&R] ((((Stropharia_coronilla,(Melanophyllum_haematospermum,Agaricus_impudicus,Agaricus_devoniensis,Agaricus_xanthoderma,Agaricus_sylvaticus,Agaricus_subperonatus,Agaricus_spissicaulis,Agaricus_silvicola,Agaricus_semotus,Agaricus_maskae,Agaricus_lanipes,Agaricus_bernardii,Agaricus_abruptibulbus,Leucocoprinus_cepaestipes,Lepiota_felina,Cystolepiota_cystidiosa,Agaricus_campestris,Leucoagaricus_naucinus,Chlorophyllum_molybdites,Agaricus_arvensis,Agaricus_bitorquis,Agaricus_bisporus)),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1199_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((NCBI_Entire-Group_169,NCBI_Entire-Group_179),(((Aphysiostroma_stercorarium,MyTree0001_Not_Metazoa-Group_3),((Neonectria_radicicola,(Viridispora_diparietispora,Neocosmospora_vasinfecta)),Nectria_pseudotrichia)),((((Acremonium_lolii,Neotyphodium_coenophialum),(Claviceps_paspali,Claviceps_purpurea)),(((Balansia_sclerotica,Myriogenospora_atramentosa),Atkinsonella_hypoxylon),Cordyceps_capitata)),((Emericellopsis_terricola,((((Nigrosabulum_globosum,(Hapsidospora_irregularis,Acremonium_chrysogenum)),Mycoarachis_inversa),Bulbithecium_hyalosporum),Acremonium_alternatum)),(Roumegueriella_rufula,NCBI_Entire-Group_245))))),NCBI_Entire-Group_160,NCBI_Entire-Group_164)))); TREE 'NCBI_Tree1199_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Neotyphodium_coenophialum,Claviceps_purpurea,Claviceps_paspali,Balansia_sclerotica,Cordyceps_capitata,Myriogenospora_atramentosa,Atkinsonella_hypoxylon,Acremonium_lolii),Emericellopsis_terricola,Bulbithecium_hyalosporum,Hapsidospora_irregularis,Nigrosabulum_globosum,((Acremonium_chrysogenum,Aphysiostroma_stercorarium,Acremonium_alternatum,MyTree0001_Not_Metazoa-Group_3),Mycoarachis_inversa,Roumegueriella_rufula),(Nectria_pseudotrichia,Viridispora_diparietispora,Neocosmospora_vasinfecta,Neonectria_radicicola)),NCBI_Entire-Group_179,NCBI_Entire-Group_169),(NCBI_Entire-Group_160,NCBI_Entire-Group_164)),NCBI_Entire-Group_245)))); TREE 'Tree1233_Metazoa' = [&R] ((((Sylvilagus,(Oryctolagus_cuniculus,(Lepus_americanus,(((Lepus_capensis,Lepus_saxatilis),(Lepus_townsendii,(Lepus_arcticus,Lepus_othus))),(Lepus_callotis,(Lepus_californicus,Lepus_alleni)))))),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree1233_Metazoa' = [&R] ((((Sylvilagus,Oryctolagus_cuniculus,Lepus_townsendii,Lepus_saxatilis,Lepus_othus,Lepus_capensis,Lepus_callotis,Lepus_californicus,Lepus_arcticus,Lepus_americanus,Lepus_alleni),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'Tree1268_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((MyTree0001_Not_Metazoa-Group_10,Kluyveromyces_lactis),NCBI_Entire-Group_246),(((Meria_laricis,((Tryblidiopsis_pinastri,Lophodermium_pinastri),NCBI_Entire-Group_195)),NCBI_Entire-Group_192),((((NCBI_Entire-Group_170,NCBI_Entire-Group_178),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2)),NCBI_Entire-Group_164),((NCBI_Entire-Group_167,NCBI_Entire-Group_169),((MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_180),(MyTree0001_Not_Metazoa-Group_4,((Hypomyces_polyporinus,(Aphysiostroma_stercorarium,MyTree0001_Not_Metazoa-Group_3)),(Tolypocladium_inflatum,(Cordyceps_ophioglossoides,((Cordycepioideus_bisporus,Claviceps_paspali),((Atkinsonella_hypoxylon,(Acremonium_lolii,Neotyphodium_coenophialum)),(((Cordyceps_bassiana,Cordyceps_militaris),NCBI_Entire-Group_185),MyTree0001_Not_Metazoa-Group_5))))))))))))))); TREE 'NCBI_Tree1268_Fungi' = [&R] (((((((((NCBI_Entire-Group_167,NCBI_Entire-Group_169,NCBI_Entire-Group_170),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_178),(MyTree0001_Not_Metazoa-Group_4,(Aphysiostroma_stercorarium,Hypomyces_polyporinus,MyTree0001_Not_Metazoa-Group_3),(Cordyceps_bassiana,Acremonium_lolii,Cordyceps_militaris,Cordyceps_ophioglossoides,Cordycepioideus_bisporus,Atkinsonella_hypoxylon,Claviceps_paspali,Tolypocladium_inflatum,Neotyphodium_coenophialum,NCBI_Entire-Group_185),NCBI_Entire-Group_180)),((Tryblidiopsis_pinastri,Meria_laricis,Lophodermium_pinastri),(NCBI_Entire-Group_195,NCBI_Entire-Group_192)),NCBI_Entire-Group_164),MyTree0001_Not_Metazoa-Group_5),((Kluyveromyces_lactis,MyTree0001_Not_Metazoa-Group_10),NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1269_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Fusarium_sambucinum,(Nectria_cinnabarina,NCBI_Entire-Group_157)),((((Tolypocladium_inflatum,Tolypocladium_cylindrosporum),(Cordyceps_capitata,(Drechmeria_coniospora,(Harposporium_janus,Hirsutella_rhossiliensis)))),((Acremonium_lolii,Neotyphodium_uncinatum),(Dussiella_tuberiformis,Beauveria_parasitica))),(NCBI_Entire-Group_182,MyTree0001_Not_Metazoa-Group_3)))))); TREE 'NCBI_Tree1269_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Fusarium_sambucinum,Nectria_cinnabarina),(Acremonium_lolii,Beauveria_parasitica,Cordyceps_capitata,Drechmeria_coniospora,Dussiella_tuberiformis,Harposporium_janus,Hirsutella_rhossiliensis,Neotyphodium_uncinatum,Tolypocladium_cylindrosporum,Tolypocladium_inflatum),(MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_182)),NCBI_Entire-Group_157)))); TREE 'Tree1340_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((((Procavia_capensis,NCBI_Entire-Group_024),(Loxodonta_africana,Elephas_maximus)),(Elephantulus_rufescens,Orycteropus_afer)),(Bos_taurus,(Equus_caballus,Equus_asinus)),NCBI_Entire-Group_031),(Oryctolagus_cuniculus,MyTree0001_Metazoa-Group_7)),MyTree0001_Metazoa-Cavia_porcellus),MyTree0001_Metazoa-Group_6)))); TREE 'NCBI_Tree1340_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Bos_taurus,Elephantulus_rufescens,Orycteropus_afer,Oryctolagus_cuniculus,Procavia_capensis,NCBI_Entire-Group_031,NCBI_Entire-Group_024,(Elephas_maximus,Loxodonta_africana),(Equus_asinus,Equus_caballus),(MyTree0001_Metazoa-Cavia_porcellus,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_7)))); TREE 'Tree1341_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((Orycteropus_afer,((Loxodonta_africana,NCBI_Entire-Group_024),Procavia_capensis)),NCBI_Entire-Group_032),(((NCBI_Entire-Group_023,Equus_caballus),(NCBI_Entire-Group_009,NCBI_Entire-Group_010)),(MyTree0001_Metazoa-Group_10,((Bos_taurus,Odocoileus_virginianus),Tragulus_napu)),Manis,NCBI_Entire-Group_011),((MyTree0001_Metazoa-Group_7,Pongo_pygmaeus),Hylobates_lar),Oryctolagus_cuniculus,NCBI_Entire-Group_031),MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Cavia_porcellus),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'NCBI_Tree1341_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Loxodonta_africana,Manis,Orycteropus_afer,Oryctolagus_cuniculus,Procavia_capensis,(NCBI_Entire-Group_009,NCBI_Entire-Group_010),(MyTree0001_Metazoa-Group_10,(Tragulus_napu,(Bos_taurus,Odocoileus_virginianus))),NCBI_Entire-Group_032,NCBI_Entire-Group_031,(Hylobates_lar,(Pongo_pygmaeus,MyTree0001_Metazoa-Group_7)),(Equus_caballus,NCBI_Entire-Group_023),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Cavia_porcellus),NCBI_Entire-Group_011,NCBI_Entire-Group_024),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'Tree1345_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((MyTree0001_Metazoa-Group_15,NCBI_Entire-Group_057),MyTree0001_Metazoa-Latimeria_chalumnae),((NCBI_Entire-Group_067,NCBI_Entire-Group_073),((MyTree0001_Metazoa-Bemisia_argentifolii,MyTree0001_Metazoa-Ixodes_scapularis,NCBI_Entire-Group_097),NCBI_Entire-Group_098),(Notosaria_nigricans,(NCBI_Entire-Group_084,((Dyscolia,NCBI_Entire-Group_083),NCBI_Entire-Group_085)))))))); TREE 'NCBI_Tree1345_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Notosaria_nigricans,((Dyscolia,NCBI_Entire-Group_085,NCBI_Entire-Group_084),NCBI_Entire-Group_083)),((MyTree0001_Metazoa-Ixodes_scapularis,NCBI_Entire-Group_097),MyTree0001_Metazoa-Bemisia_argentifolii),NCBI_Entire-Group_067,NCBI_Entire-Group_073,NCBI_Entire-Group_098),((MyTree0001_Metazoa-Group_15,NCBI_Entire-Group_057),MyTree0001_Metazoa-Latimeria_chalumnae))))); TREE 'Tree1358_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((NCBI_Entire-Group_217,NCBI_Entire-Group_218),(((NCBI_Entire-Group_195,NCBI_Entire-Group_186),(((NCBI_Entire-Group_170,NCBI_Entire-Group_182),NCBI_Entire-Group_189),((((((Eurotium_herbariorum,(Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger)),NCBI_Entire-Group_237),NCBI_Entire-Group_232),Stictis_radiata),NCBI_Entire-Group_227),NCBI_Entire-Group_226))),NCBI_Entire-Group_194)),MyTree0001_Not_Metazoa-Group_6)))); TREE 'NCBI_Tree1358_Fungi' = [&R] (((((((NCBI_Entire-Group_170,NCBI_Entire-Group_182),(NCBI_Entire-Group_186,(NCBI_Entire-Group_195,NCBI_Entire-Group_189,NCBI_Entire-Group_194))),(NCBI_Entire-Group_217,NCBI_Entire-Group_218),(NCBI_Entire-Group_226,NCBI_Entire-Group_227,Stictis_radiata,NCBI_Entire-Group_232),((Eurotium_herbariorum,Aspergillus_fumigatus,Aspergillus_niger,Aspergillus_flavus,Aspergillus_aculeatus),NCBI_Entire-Group_237)),MyTree0001_Not_Metazoa-Group_6),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1359_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((((((Icmadophila_ericetorum,(Siphula_polyschides,Siphula_ceratites)),Dibaeis_baeomyces),Thamnolia_subuliformis),((NCBI_Entire-Group_170,NCBI_Entire-Group_178),(MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_182))),(NCBI_Entire-Group_227,(Loxosporopsis_corallifera,NCBI_Entire-Group_225))),(((((NCBI_Entire-Group_235,NCBI_Entire-Group_234),NCBI_Entire-Group_232),Porpidia_crustulata),NCBI_Entire-Group_230),((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),NCBI_Entire-Group_241))),((NCBI_Entire-Group_163,NCBI_Entire-Group_205),NCBI_Entire-Group_212)),(((NCBI_Entire-Group_186,NCBI_Entire-Group_195),NCBI_Entire-Group_165),(NCBI_Entire-Group_189,NCBI_Entire-Group_194))),((((NCBI_Entire-Group_217,NCBI_Entire-Group_220),NCBI_Entire-Group_216),NCBI_Entire-Group_218),NCBI_Entire-Group_157)),((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6)),((NCBI_Entire-Group_151,NCBI_Entire-Group_152),NCBI_Entire-Group_147))))); TREE 'NCBI_Tree1359_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),(((Loxosporopsis_corallifera,Porpidia_crustulata,NCBI_Entire-Group_235,NCBI_Entire-Group_232,NCBI_Entire-Group_234),NCBI_Entire-Group_230),NCBI_Entire-Group_227,(Dibaeis_baeomyces,Icmadophila_ericetorum,Siphula_ceratites,Siphula_polyschides,Thamnolia_subuliformis),NCBI_Entire-Group_225),(NCBI_Entire-Group_216,NCBI_Entire-Group_217,NCBI_Entire-Group_218,NCBI_Entire-Group_220),((NCBI_Entire-Group_186,(NCBI_Entire-Group_189,NCBI_Entire-Group_194,NCBI_Entire-Group_195)),((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_170,NCBI_Entire-Group_178),NCBI_Entire-Group_182),(NCBI_Entire-Group_163,NCBI_Entire-Group_165),(NCBI_Entire-Group_212,NCBI_Entire-Group_205)),NCBI_Entire-Group_157,NCBI_Entire-Group_241),(MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6),(NCBI_Entire-Group_147,NCBI_Entire-Group_151,NCBI_Entire-Group_152))))); TREE 'Tree1410_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Monilinia_fructicola,(Scleromitrula_spiraeicola,((Helminthosporium_asterinum,Cladosporium_colocasiae),(((((Drechslera_graminea,Pyrenophora_tritici-repentis),(((((((((Bipolaris_sacchari,Cochliobolus_heterostrophus),(((Cochliobolus_melinidis,(Cochliobolus_luttrellii,Cochliobolus_bicolor)),(Bipolaris_oryzae,Cochliobolus_peregianensis)),((Cochliobolus_carbonum,Cochliobolus_victoriae),Bipolaris_urochloae))),Cochliobolus_sativus),Bipolaris_sorghicola),(Setosphaeria_monoceras,(Setosphaeria_minor,Setosphaeria_rostrata))),Cochliobolus_homomorphus),(((((((((Cochliobolus_perotidis,(Cochliobolus_dactyloctenii,Cochliobolus_hawaiiensis)),Cochliobolus_ellisii),Curvularia_inaequalis),(Cochliobolus_ravenelii,(Curvularia_affinis,Cochliobolus_cymbopogonis))),(Curvularia_gladioli,Curvularia_gudauskasii)),Cochliobolus_lunatus),Cochliobolus_verruculosus),(Curvularia_clavata,Cochliobolus_intermedius)),Cochliobolus_kusanoi)),((Stemphylium_alfalfae,Pleospora_herbarum),Stemphylium_botryosum)),Alternaria_alternata)),Drechslera_avenae),(Leptosphaeria_maculans,NCBI_Entire-Group_213)),(((Helminthosporium_chlorophorae,Helminthosporium_solani),Helminthosporium_velutinum),Leptosphaeria_bicolor)))))))); TREE 'NCBI_Tree1410_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Monilinia_fructicola,Scleromitrula_spiraeicola),((Alternaria_alternata,Bipolaris_oryzae,Bipolaris_sacchari,Bipolaris_sorghicola,Bipolaris_urochloae,Cochliobolus_bicolor,Cochliobolus_carbonum,Cochliobolus_cymbopogonis,Cochliobolus_dactyloctenii,Cochliobolus_ellisii,Cochliobolus_hawaiiensis,Cochliobolus_heterostrophus,Cochliobolus_homomorphus,Cochliobolus_intermedius,Cochliobolus_kusanoi,Cochliobolus_lunatus,Cochliobolus_luttrellii,Cochliobolus_melinidis,Cochliobolus_peregianensis,Cochliobolus_perotidis,Cochliobolus_ravenelii,Cochliobolus_sativus,Cochliobolus_verruculosus,Cochliobolus_victoriae,Curvularia_affinis,Curvularia_clavata,Curvularia_gladioli,Curvularia_gudauskasii,Curvularia_inaequalis,Drechslera_avenae,Drechslera_graminea,Helminthosporium_asterinum,Helminthosporium_chlorophorae,Helminthosporium_solani,Helminthosporium_velutinum,Pleospora_herbarum,Pyrenophora_tritici-repentis,Setosphaeria_minor,Setosphaeria_monoceras,Setosphaeria_rostrata,Stemphylium_alfalfae,Stemphylium_botryosum),(Cladosporium_colocasiae,Leptosphaeria_bicolor,Leptosphaeria_maculans),NCBI_Entire-Group_213))))); TREE 'Tree1411_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((NCBI_Entire-Group_170,NCBI_Entire-Group_188),(MyTree0001_Not_Metazoa-Group_5,((Coccodinium_bartschii,((((NCBI_Entire-Group_209,((((Curreya_pityophila,NCBI_Entire-Group_208),(Leptosphaeria_bicolor,(Helminthosporium_velutinum,Helminthosporium_solani))),(Pleospora_rudis,(Cucurbitaria_berberidis,(((Leptosphaeria_doliolum,(Ophiobolus_herpotrichus,Leptosphaeria_microscopica)),NCBI_Entire-Group_213),(Leptosphaeria_maculans,(Pleospora_betae,(Setosphaeria_rostrata,((Alternaria_alternata,Pleospora_herbarum),(Cochliobolus_sativus,(Pyrenophora_tritici-repentis,Pyrenophora_trichostoma)))))))))),(Mycosphaerella_mycopappi,NCBI_Entire-Group_211))),NCBI_Entire-Group_205),MyTree0001_Not_Metazoa-Group_6),NCBI_Entire-Group_163)),NCBI_Entire-Group_204))),NCBI_Entire-Group_220),NCBI_Entire-Group_221)))); TREE 'NCBI_Tree1411_Fungi' = [&R] (((((((Coccodinium_bartschii,(((Cucurbitaria_berberidis,Curreya_pityophila),(Ophiobolus_herpotrichus,Mycosphaerella_mycopappi,Leptosphaeria_microscopica,Leptosphaeria_doliolum,Leptosphaeria_bicolor,Leptosphaeria_maculans),NCBI_Entire-Group_204,NCBI_Entire-Group_205,NCBI_Entire-Group_208),NCBI_Entire-Group_209,(Helminthosporium_velutinum,Helminthosporium_solani,Pleospora_betae,Pyrenophora_trichostoma,Pyrenophora_tritici-repentis,Setosphaeria_rostrata,Cochliobolus_sativus,Pleospora_herbarum,Pleospora_rudis,Alternaria_alternata),NCBI_Entire-Group_211,NCBI_Entire-Group_213)),NCBI_Entire-Group_163,NCBI_Entire-Group_170,NCBI_Entire-Group_188),(NCBI_Entire-Group_220,NCBI_Entire-Group_221),MyTree0001_Not_Metazoa-Group_5),MyTree0001_Not_Metazoa-Group_6),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1419_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(NCBI_Entire-Group_090,MyTree0001_Metazoa-Group_1)))); TREE 'NCBI_Tree1419_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(NCBI_Entire-Group_090,MyTree0001_Metazoa-Group_1)))); TREE 'Tree1420_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(NCBI_Entire-Group_090,MyTree0001_Metazoa-Group_1)))); TREE 'NCBI_Tree1420_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(NCBI_Entire-Group_090,MyTree0001_Metazoa-Group_1)))); TREE 'Tree1449_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((((((Aspergillus_niger,Aspergillus_fumigatus,Aspergillus_flavus,Aspergillus_aculeatus),Eurotium_rubrum),NCBI_Entire-Group_237),(NCBI_Entire-Group_240,NCBI_Entire-Group_241)),MyTree0001_Not_Metazoa-Group_1),((NCBI_Entire-Group_230,NCBI_Entire-Group_231),NCBI_Entire-Group_234)),((((((NCBI_Entire-Group_205,NCBI_Entire-Group_206),((((((Pleospora_herbarum,Setosphaeria_rostrata),((NCBI_Entire-Group_207,NCBI_Entire-Group_213),Cucurbitaria_elongata)),Pleospora_rudis),Curreya_pityophila),((NCBI_Entire-Group_179,NCBI_Entire-Group_209),NCBI_Entire-Group_211)),NCBI_Entire-Group_197)),Coccodinium_bartschii),NCBI_Entire-Group_163),NCBI_Entire-Group_204),NCBI_Entire-Group_198)),NCBI_Entire-Group_188),NCBI_Entire-Group_220),NCBI_Entire-Group_139)))); TREE 'NCBI_Tree1449_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger,Eurotium_rubrum),NCBI_Entire-Group_237),((Coccodinium_bartschii,NCBI_Entire-Group_198,(((Cucurbitaria_elongata,Curreya_pityophila),NCBI_Entire-Group_206,NCBI_Entire-Group_205,NCBI_Entire-Group_204,NCBI_Entire-Group_207),(Pleospora_herbarum,Pleospora_rudis,Setosphaeria_rostrata),NCBI_Entire-Group_209,NCBI_Entire-Group_211,NCBI_Entire-Group_213),NCBI_Entire-Group_197),(MyTree0001_Not_Metazoa-Group_1,NCBI_Entire-Group_179),NCBI_Entire-Group_163,NCBI_Entire-Group_188),(NCBI_Entire-Group_240,NCBI_Entire-Group_241),((NCBI_Entire-Group_231,NCBI_Entire-Group_234),NCBI_Entire-Group_230),NCBI_Entire-Group_220),NCBI_Entire-Group_139)))); TREE 'Tree1462_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((((((((Alternaria_cheiranthi,Ulocladium_atrum),Alternaria_alternata),((Alternaria_brassicae,(Alternaria_radicina,Alternaria_carotiincultae)),(Alternaria_petroselini,Alternaria_selini))),Alternaria_dauci),(Ulocladium_alternariae,(Alternaria_brassicicola,Alternaria_raphani))),Pleospora_herbarum),(Cochliobolus_sativus,Pyrenophora_tritici-repentis)),Setosphaeria_rostrata),(((Leptosphaeria_doliolum,NCBI_Entire-Group_213),(Cucurbitaria_elongata,(Leptosphaeria_maculans,Alternaria_longissima))),Cucurbitaria_berberidis)),(NCBI_Entire-Group_209,NCBI_Entire-Group_211)),(NCBI_Entire-Group_163,NCBI_Entire-Group_205)),(((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger),Talaromyces_flavus),MyTree0001_Not_Metazoa-Coccidioides_immitis)),MyTree0001_Not_Metazoa-Group_2)))); TREE 'NCBI_Tree1462_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger,Talaromyces_flavus),MyTree0001_Not_Metazoa-Coccidioides_immitis),((((Cucurbitaria_berberidis,Cucurbitaria_elongata),(Leptosphaeria_doliolum,Leptosphaeria_maculans),NCBI_Entire-Group_205),(Alternaria_alternata,Alternaria_brassicae,Alternaria_brassicicola,Alternaria_carotiincultae,Alternaria_cheiranthi,Alternaria_dauci,Alternaria_longissima,Alternaria_petroselini,Alternaria_radicina,Alternaria_raphani,Alternaria_selini,Cochliobolus_sativus,Pleospora_herbarum,Pyrenophora_tritici-repentis,Setosphaeria_rostrata,Ulocladium_alternariae,Ulocladium_atrum),NCBI_Entire-Group_209,NCBI_Entire-Group_211,NCBI_Entire-Group_213),MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_163))))); TREE 'Tree1490_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((((((Trapelia_placodioides,Trapelia_involuta),Placopsis_gelida),Anamylopsora_pulcherrima),(NCBI_Entire-Group_225,NCBI_Entire-Group_228)),NCBI_Entire-Group_224),(((((Dibaeis_baeomyces,Siphula_ceratites),Thamnolia_vermicularis),(Stereocaulon_ramulosum,NCBI_Entire-Group_234)),((NCBI_Entire-Group_229,NCBI_Entire-Group_233),Sphaerophorus_globosus)),Porpidia_crustulata)),(((MyTree0001_Not_Metazoa-Group_5,MyTree0001_Not_Metazoa-Coccidioides_immitis),(MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_241)),NCBI_Entire-Group_243)),(((Arthonia_radiata,NCBI_Entire-Group_242),((NCBI_Entire-Group_160,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_2)),((NCBI_Entire-Group_212,NCBI_Entire-Group_213),(NCBI_Entire-Group_209,NCBI_Entire-Group_211)))),(((NCBI_Entire-Group_186,NCBI_Entire-Group_187),Cyttaria_darwinii),NCBI_Entire-Group_189)),(NCBI_Entire-Group_218,NCBI_Entire-Group_219)),MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246)))); TREE 'NCBI_Tree1490_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Arthonia_radiata,NCBI_Entire-Group_242),(MyTree0001_Not_Metazoa-Group_5,MyTree0001_Not_Metazoa-Coccidioides_immitis),((Anamylopsora_pulcherrima,(Placopsis_gelida,Trapelia_involuta,Trapelia_placodioides)),((Porpidia_crustulata,Sphaerophorus_globosus,Stereocaulon_ramulosum,NCBI_Entire-Group_233,NCBI_Entire-Group_234),NCBI_Entire-Group_229),(Dibaeis_baeomyces,Siphula_ceratites,Thamnolia_vermicularis),NCBI_Entire-Group_224,NCBI_Entire-Group_225,NCBI_Entire-Group_228),(NCBI_Entire-Group_218,NCBI_Entire-Group_219),((Cyttaria_darwinii,(NCBI_Entire-Group_186,NCBI_Entire-Group_187),NCBI_Entire-Group_189),(MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_182),(NCBI_Entire-Group_209,NCBI_Entire-Group_211,NCBI_Entire-Group_212,NCBI_Entire-Group_213),NCBI_Entire-Group_160),NCBI_Entire-Group_241),(MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_243)))); TREE 'Tree1494_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Conidiobolus_coronatus,NCBI_Entire-Group_248),((NCBI_Entire-Group_121,(((NCBI_Entire-Group_125,NCBI_Entire-Group_126),((MyTree0001_Not_Metazoa-Ustilago_maydis,NCBI_Entire-Group_128),(((NCBI_Entire-Group_140,NCBI_Entire-Group_139),MyTree0001_Not_Metazoa-Group_8),NCBI_Entire-Group_137))),(((MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_156),Schizosaccharomyces_pombe),(((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_11),((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_170),(((NCBI_Entire-Group_211,NCBI_Entire-Group_212),((MyTree0001_Not_Metazoa-Group_5,MyTree0001_Not_Metazoa-Coccidioides_immitis),NCBI_Entire-Group_241)),((NCBI_Entire-Group_165,NCBI_Entire-Group_195),NCBI_Entire-Group_222))))))),(Basidiobolus_ranarum,NCBI_Entire-Group_253)))))); TREE 'NCBI_Tree1494_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(NCBI_Entire-Group_121,((Basidiobolus_ranarum,Conidiobolus_coronatus),NCBI_Entire-Group_248),(Schizosaccharomyces_pombe,((MyTree0001_Not_Metazoa-Group_5,MyTree0001_Not_Metazoa-Coccidioides_immitis),((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_170),(NCBI_Entire-Group_211,NCBI_Entire-Group_212),NCBI_Entire-Group_165,NCBI_Entire-Group_195),NCBI_Entire-Group_222,NCBI_Entire-Group_241),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_156),((NCBI_Entire-Group_125,NCBI_Entire-Group_126,NCBI_Entire-Group_128),((MyTree0001_Not_Metazoa-Group_8,(NCBI_Entire-Group_140,NCBI_Entire-Group_139)),NCBI_Entire-Group_137),MyTree0001_Not_Metazoa-Ustilago_maydis),NCBI_Entire-Group_253)))); TREE 'Tree1497_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((Subbaromyces_splendens,NCBI_Entire-Group_212),(((NCBI_Entire-Group_167,NCBI_Entire-Group_169),(NCBI_Entire-Group_184,NCBI_Entire-Group_182)),(NCBI_Entire-Group_164,((Diaporthe_phaseolorum,(Endothia_gyrosa,Cryphonectria_parasitica)),(Ophiostoma_ulmi,(((Farrowia_longicollea,(Farrowia_seminuda,(Chaetomium_globosum,Chaetomium_gracile,Chaetomium_thermophilum))),MyTree0001_Not_Metazoa-Group_2),Thielavia_terrestris)))))),MyTree0001_Not_Metazoa-Group_5),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_0),NCBI_Entire-Group_156)))); TREE 'NCBI_Tree1497_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Cryphonectria_parasitica,Diaporthe_phaseolorum,Endothia_gyrosa),((Chaetomium_globosum,Chaetomium_gracile,Chaetomium_thermophilum,Farrowia_longicollea,Farrowia_seminuda,Thielavia_terrestris),MyTree0001_Not_Metazoa-Group_2),((Ophiostoma_ulmi,Subbaromyces_splendens),NCBI_Entire-Group_167,NCBI_Entire-Group_169)),(NCBI_Entire-Group_184,NCBI_Entire-Group_182)),NCBI_Entire-Group_164,NCBI_Entire-Group_212),MyTree0001_Not_Metazoa-Group_5),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_0),NCBI_Entire-Group_156)))); TREE 'Tree1499_Fungi' = [&R] ((((((Agaricus_campestris,((Agaricus_subrutilescens,((Agaricus_lilaceps,Agaricus_crocodilinus),Agaricus_californicus)),Agaricus_benesi)),(Agaricus_subfloccosus,Agaricus_subperonatus,Agaricus_bisporus)),Agaricus_bitorquis),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree1499_Fungi' = [&R] ((((Agaricus_subrutilescens,Agaricus_subperonatus,Agaricus_subfloccosus,Agaricus_lilaceps,Agaricus_crocodilinus,Agaricus_campestris,Agaricus_californicus,Agaricus_bitorquis,Agaricus_bisporus,Agaricus_benesi),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1527_Fungi' = [&R] (Archaea,Bacteria,((((((((((MyTree0001_Not_Metazoa-Group_5,MyTree0001_Not_Metazoa-Group_7),MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_237),Thermomyces_lanuginosus),(((Kluyveromyces_lactis,MyTree0001_Not_Metazoa-Group_10),NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_11)),NCBI_Entire-Group_252),(Schizosaccharomyces_pombe,(((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_146),NCBI_Entire-Group_140),((Phaffia_rhodozyma,MyTree0001_Not_Metazoa-Cryptococcus_neoformans),NCBI_Entire-Group_125)))),Pneumocystis_carinii),Metazoa),Viridiplantae)); TREE 'NCBI_Tree1527_Fungi' = [&R] (((((((Phaffia_rhodozyma,MyTree0001_Not_Metazoa-Cryptococcus_neoformans),((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_146),NCBI_Entire-Group_140)),NCBI_Entire-Group_125),(((MyTree0001_Not_Metazoa-Group_2,MyTree0001_Not_Metazoa-Group_7),(MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237)),Thermomyces_lanuginosus,Schizosaccharomyces_pombe,((Kluyveromyces_lactis,MyTree0001_Not_Metazoa-Group_10),MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246),Pneumocystis_carinii),NCBI_Entire-Group_252),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1527_Not_Fungi' = [&R] (Archaea,Bacteria,((((((Fungi,(((((((Echinococcus_granulosus,MyTree0001_Not_Metazoa-Entamoeba_histolytica),MyTree0001_Not_Metazoa-Dictyostelium_discoideum),NCBI_Entire-Group_291),NCBI_Entire-Group_109),(MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_1)),(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_13,MyTree0001_Metazoa-Group_6))),((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_5,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Danio_rerio))),NCBI_Entire-Group_002),((MyTree0001_Not_Metazoa-Group_12,MyTree0001_Not_Metazoa-Group_13,MyTree0001_Not_Metazoa-Arabidopsis_thaliana),((NCBI_Entire-Group_255,NCBI_Entire-Group_256),NCBI_Entire-Group_281))),(Giardia_lamblia,MyTree0001_Not_Metazoa-Group_19)),(Achlya_bisexualis,NCBI_Entire-Group_003)),(((Euglena_gracilis,MyTree0001_Not_Metazoa-Group_14),(NCBI_Entire-Group_005,NCBI_Entire-Group_289)),MyTree0001_Not_Metazoa-Group_17))); TREE 'NCBI_Tree1527_Not_Fungi' = [&R] ((Giardia_lamblia,((((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_12),MyTree0001_Not_Metazoa-Group_13),NCBI_Entire-Group_256),NCBI_Entire-Group_255,NCBI_Entire-Group_281),(((Echinococcus_granulosus,MyTree0001_Metazoa-Group_2,((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_1),(((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),(MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_13)))),NCBI_Entire-Group_109),Fungi),(MyTree0001_Not_Metazoa-Group_17,(MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_005)),(Achlya_bisexualis,NCBI_Entire-Group_003),(Euglena_gracilis,MyTree0001_Not_Metazoa-Group_14),MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica,NCBI_Entire-Group_002,NCBI_Entire-Group_289,NCBI_Entire-Group_291),Bacteria,Archaea); TREE 'Tree1559_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_185),NCBI_Entire-Group_167),((Viridispora_diparietispora,((Cylindrocladium_floridanum,Calonectria_morganii),(Neonectria_radicicola,(Leuconectria_clusiae,(Nectria_pseudotrichia,Nectria_cinnabarina))))),(Myrothecium_inundatum,(Peethambara_sundara,(Albosynnema_elegans,(((Kallichroma_glabrum,Kallichroma_tethys),((((Acremonium_alternatum,(Bulbithecium_hyalosporum,((Mycoarachis_inversa,Hapsidospora_irregularis),Nigrosabulum_globosum))),(MyTree0001_Not_Metazoa-Group_6,Emericellopsis_terricola)),(((Bionectria_pityrodes,Bionectria_sesquicillii),(Bionectria_ochroleuca,Nectria_grammicospora)),(((Nectriopsis_sporangiicola,Nectriopsis_violacea),Ochronectria_calami),(Nectria_zonata,((Selinia_pulchra,(Heleococcum_japonicum,Hydropisphaera_peziza)),Hydropisphaera_erubescens))))),NCBI_Entire-Group_245)),((((Neotyphodium_coenophialum,Acremonium_lolii),(Cordycepioideus_bisporus,Cordyceps_capitata)),Balansia_obtecta),(Hypocrea_pallida,((Hypomyces_australis,Hypomyces_aurantius),((Sphaerostilbella_berkeleyana,Sphaerostilbella_aureonitens),(Hypocrea_lutea,MyTree0001_Not_Metazoa-Group_3)))))))))))))); TREE 'NCBI_Tree1559_Fungi' = [&R] (((((((Neonectria_radicicola,Leuconectria_clusiae,Calonectria_morganii,Cylindrocladium_floridanum,Viridispora_diparietispora,Nectria_zonata,Nectria_pseudotrichia,Nectria_cinnabarina),(Selinia_pulchra,Peethambara_sundara,Ochronectria_calami,Myrothecium_inundatum,Kallichroma_tethys,Kallichroma_glabrum,Hydropisphaera_peziza,Hydropisphaera_erubescens,Albosynnema_elegans,Heleococcum_japonicum,Mycoarachis_inversa,(Nectriopsis_violacea,Bionectria_sesquicillii,Bionectria_pityrodes,Nectria_grammicospora,Acremonium_alternatum,Sphaerostilbella_berkeleyana,Sphaerostilbella_aureonitens,Nectriopsis_sporangiicola,Hypocrea_pallida,Hypocrea_lutea,Bionectria_ochroleuca,Hypomyces_australis,Hypomyces_aurantius,MyTree0001_Not_Metazoa-Group_3)),Nigrosabulum_globosum,Hapsidospora_irregularis,Bulbithecium_hyalosporum,Emericellopsis_terricola,(Acremonium_lolii,Cordycepioideus_bisporus,Cordyceps_capitata,Balansia_obtecta,(MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_185),Neotyphodium_coenophialum)),NCBI_Entire-Group_167),MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_245),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1561_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Torulaspora_delbrueckii,(Saccharomyces_cerevisiae,Saccharomyces_kluyveri)),MyTree0001_Not_Metazoa-Group_11),(((NCBI_Entire-Group_163,NCBI_Entire-Group_208),NCBI_Entire-Group_197),((NCBI_Entire-Group_162,NCBI_Entire-Group_164),((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_170),(MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina))))))); TREE 'NCBI_Tree1561_Fungi' = [&R] ((((((NCBI_Entire-Group_162,NCBI_Entire-Group_163,NCBI_Entire-Group_164),((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_170),((MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_3)),(NCBI_Entire-Group_197,NCBI_Entire-Group_208)),((Torulaspora_delbrueckii,Saccharomyces_kluyveri,Saccharomyces_cerevisiae),MyTree0001_Not_Metazoa-Group_11)),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1564_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Torulaspora_delbrueckii,(Saccharomyces_cerevisiae,Saccharomyces_kluyveri)),MyTree0001_Not_Metazoa-Group_11),(((MyTree0001_Not_Metazoa-Group_2,MyTree0001_Not_Metazoa-Group_3,MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),NCBI_Entire-Group_164),(((NCBI_Entire-Group_163,NCBI_Entire-Group_208),NCBI_Entire-Group_197),((Phaeococcomyces_catenatus,(MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_203)),((Capronia_coronata,(Capronia_pulcherrima,Capronia_pilosella)),(Exophiala_jeanselmei,(Rhinocladiella_atrovirens,Exophiala_spinifera)))))))))); TREE 'NCBI_Tree1564_Fungi' = [&R] (((((((NCBI_Entire-Group_163,NCBI_Entire-Group_164),((MyTree0001_Not_Metazoa-Group_3,MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),MyTree0001_Not_Metazoa-Group_2),((NCBI_Entire-Group_203,NCBI_Entire-Group_208),NCBI_Entire-Group_197)),(Exophiala_spinifera,Phaeococcomyces_catenatus,Capronia_pilosella,Capronia_coronata,Capronia_pulcherrima,Rhinocladiella_atrovirens,Exophiala_jeanselmei)),((Torulaspora_delbrueckii,Saccharomyces_kluyveri,Saccharomyces_cerevisiae),MyTree0001_Not_Metazoa-Group_11),MyTree0001_Not_Metazoa-Group_6),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1565_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Torulaspora_delbrueckii,(Saccharomyces_cerevisiae,Saccharomyces_kluyveri)),MyTree0001_Not_Metazoa-Group_11),((NCBI_Entire-Group_213,NCBI_Entire-Group_212),(((NCBI_Entire-Group_163,NCBI_Entire-Group_208),NCBI_Entire-Group_197),(((Cladosporium_fulvum,Mycosphaerella_graminicola),(Cladosporium_sphaerospermum,((Cladosporium_oxysporum,Cladosporium_herbarum),(Cladosporium_cladosporioides,Cladosporium_tenuissimum)))),NCBI_Entire-Group_205))))))); TREE 'NCBI_Tree1565_Fungi' = [&R] (((((((((Cladosporium_sphaerospermum,Cladosporium_tenuissimum,Mycosphaerella_graminicola,Cladosporium_oxysporum,Cladosporium_herbarum,Cladosporium_cladosporioides,Cladosporium_fulvum),NCBI_Entire-Group_205,NCBI_Entire-Group_208),NCBI_Entire-Group_213,NCBI_Entire-Group_212),NCBI_Entire-Group_197),NCBI_Entire-Group_163),((Torulaspora_delbrueckii,Saccharomyces_kluyveri,Saccharomyces_cerevisiae),MyTree0001_Not_Metazoa-Group_11)),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1568_Fungi' = [&R] (((((Penicillium_janthinellum,(Penicillium_simplicissimum,((Penicillium_ciegleri,Penicillium_pulvillorum,Penicillium_ochrochloron),((Penicillium_brasilianum,Penicillium_paraherquei),Penicillium_skrjabinii)))),Penicillium_piscarium),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree1568_Fungi' = [&R] ((((Penicillium_skrjabinii,Penicillium_simplicissimum,Penicillium_pulvillorum,Penicillium_piscarium,Penicillium_paraherquei,Penicillium_ochrochloron,Penicillium_janthinellum,Penicillium_ciegleri,Penicillium_brasilianum),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1625_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((((Daedaleopsis_confragosa,NCBI_Entire-Group_151),Trametes_versicolor),((Ceriporia_purpurea,(Irpex_lacteus,Oxyporus_latemarginatus)),Tyromyces_alborubescens)),(Laetiporus_sulphureus,((Tyromyces_lacteus,NCBI_Entire-Group_155),NCBI_Entire-Group_143))),((Bjerkandera_adusta,Lopharia_spadicea),Phanerochaete_chrysosporium)),(((((Rhizochaete_filamentosa,Antrodia_carbonica),Meripilus_giganteus),Fomitopsis_pinicola),(NCBI_Entire-Group_144,Panus_rudis)),(((((Amanita_muscaria,Cortinarius_iodes),(Lepiota_procera,Agaricus_bisporus)),Pluteus_petasatus),Pleurotus_tuberregium),(Panellus_stypticus,(Schizophyllum_commune,Fistulina_hepatica))))),((((NCBI_Entire-Group_149,((Auriscalpium_vulgare,(Bondarzewia_berkeleyi,Heterobasidion_annosum_species_complex)),NCBI_Entire-Group_138)),(Stereum_hirsutum,(NCBI_Entire-Group_142,NCBI_Entire-Group_152))),NCBI_Entire-Group_140),NCBI_Entire-Group_150),NCBI_Entire-Group_139),NCBI_Entire-Group_133)))); TREE 'NCBI_Tree1625_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Irpex_lacteus,(Stereum_hirsutum,Lopharia_spadicea),NCBI_Entire-Group_155),(Phanerochaete_chrysosporium,Trametes_versicolor,Bjerkandera_adusta,Laetiporus_sulphureus,Antrodia_carbonica,Ceriporia_purpurea,Daedaleopsis_confragosa,Meripilus_giganteus,Fomitopsis_pinicola,Oxyporus_latemarginatus,Tyromyces_alborubescens,Rhizochaete_filamentosa,Tyromyces_lacteus),NCBI_Entire-Group_152),Auriscalpium_vulgare,Bondarzewia_berkeleyi,Fistulina_hepatica,Panus_rudis,NCBI_Entire-Group_149,NCBI_Entire-Group_150,NCBI_Entire-Group_151),((Schizophyllum_commune,Heterobasidion_annosum_species_complex),(Agaricus_bisporus,Lepiota_procera),Panellus_stypticus,Pleurotus_tuberregium,Amanita_muscaria,Pluteus_petasatus,Cortinarius_iodes),(NCBI_Entire-Group_143,NCBI_Entire-Group_144),NCBI_Entire-Group_142,(NCBI_Entire-Group_139,NCBI_Entire-Group_140),NCBI_Entire-Group_138),NCBI_Entire-Group_133)))); TREE 'Tree1801_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Neolecta_vitellina,((((Zygosaccharomyces_rouxii,(Kluyveromyces_lactis,(Saccharomyces_cerevisiae,Saccharomyces_kluyveri))),NCBI_Entire-Group_246),NCBI_Entire-Group_156),((((((((NCBI_Entire-Group_205,NCBI_Entire-Group_212),NCBI_Entire-Group_163),((((NCBI_Entire-Group_170,NCBI_Entire-Group_178),((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),((NCBI_Entire-Group_167,NCBI_Entire-Group_169),(NCBI_Entire-Group_182,NCBI_Entire-Group_184)))),NCBI_Entire-Group_164),((((Coniosporium_perforans,NCBI_Entire-Group_241),((MyTree0001_Not_Metazoa-Coccidioides_immitis,NCBI_Entire-Group_237),(Eurotium_rubrum,(Aspergillus_niger,Aspergillus_fumigatus,Aspergillus_flavus,Aspergillus_aculeatus)))),Stictis_radiata),NCBI_Entire-Group_230))),NCBI_Entire-Group_165),((Hymenoscyphus_fructigenus,(Cyttaria_darwinii,((NCBI_Entire-Group_180,NCBI_Entire-Group_245),NCBI_Entire-Group_189))),((NCBI_Entire-Group_195,((Meria_laricis,NCBI_Entire-Group_192),(Gremmeniella_abietina,((Lophodermium_pinastri,Tryblidiopsis_pinastri),NCBI_Entire-Group_186)))),NCBI_Entire-Group_188))),NCBI_Entire-Group_222),NCBI_Entire-Group_220),NCBI_Entire-Group_157))),NCBI_Entire-Group_131)))); TREE 'NCBI_Tree1801_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Coniosporium_perforans,Neolecta_vitellina,(((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger,Eurotium_rubrum),(MyTree0001_Not_Metazoa-Coccidioides_immitis,NCBI_Entire-Group_237)),(Stictis_radiata,NCBI_Entire-Group_230),(NCBI_Entire-Group_220,NCBI_Entire-Group_222),((Cyttaria_darwinii,((Lophodermium_pinastri,Meria_laricis,Tryblidiopsis_pinastri),NCBI_Entire-Group_186),(NCBI_Entire-Group_195,(Gremmeniella_abietina,Hymenoscyphus_fructigenus),NCBI_Entire-Group_192,NCBI_Entire-Group_188,NCBI_Entire-Group_189)),(((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),(NCBI_Entire-Group_167,NCBI_Entire-Group_169,NCBI_Entire-Group_170),NCBI_Entire-Group_178),(NCBI_Entire-Group_180,NCBI_Entire-Group_182,NCBI_Entire-Group_184)),(NCBI_Entire-Group_163,NCBI_Entire-Group_164,NCBI_Entire-Group_165),(NCBI_Entire-Group_205,NCBI_Entire-Group_212)),NCBI_Entire-Group_157,NCBI_Entire-Group_241),((Kluyveromyces_lactis,Saccharomyces_cerevisiae,Saccharomyces_kluyveri,Zygosaccharomyces_rouxii),NCBI_Entire-Group_246),NCBI_Entire-Group_156,NCBI_Entire-Group_245),NCBI_Entire-Group_131)))); TREE 'Tree1817_Eukaryota' = [&R] (Archaea,Bacteria,(NCBI_Entire-Group_257,((((((Chlorella_kessleri,NCBI_Entire-Group_277),NCBI_Entire-Group_275),((((Chlamydomonas_reinhardtii,Polytoma_obtusum,NCBI_Entire-Group_281),Uronema_acuminata),NCBI_Entire-Group_274,NCBI_Entire-Group_278),NCBI_Entire-Group_280),NCBI_Entire-Group_279),NCBI_Entire-Group_273,NCBI_Entire-Group_272),Pseudoscourfieldia_marina,NCBI_Entire-Group_283),NCBI_Entire-Group_284),NCBI_Entire-Group_255,NCBI_Entire-Group_276)); TREE 'NCBI_Tree1817_Eukaryota' = [&R] (Archaea,Bacteria,(Uronema_acuminata,(NCBI_Entire-Group_257,((NCBI_Entire-Group_273,NCBI_Entire-Group_272),(((NCBI_Entire-Group_276,NCBI_Entire-Group_277,Chlorella_kessleri),(NCBI_Entire-Group_279,NCBI_Entire-Group_278),NCBI_Entire-Group_275),NCBI_Entire-Group_280,((Polytoma_obtusum,Chlamydomonas_reinhardtii),NCBI_Entire-Group_281),NCBI_Entire-Group_274),(NCBI_Entire-Group_283,(Pseudoscourfieldia_marina,NCBI_Entire-Group_284))),NCBI_Entire-Group_255))); TREE 'Tree1818_Eukaryota' = [&R] (Archaea,Bacteria,(NCBI_Entire-Group_289,(((((MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Toxoplasma_gondii),MyTree0001_Not_Metazoa-Group_19),(((((NCBI_Entire-Group_279,NCBI_Entire-Group_282),NCBI_Entire-Group_277),NCBI_Entire-Group_275),(Arceuthobium_verticilliflorum,((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,NCBI_Entire-Group_259),MyTree0001_Not_Metazoa-Group_13))),((Schizosaccharomyces_pombe,((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_2)),(MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Group_8)))),NCBI_Entire-Group_004),((MyTree0001_Metazoa-Group_15,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7)),(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_0)))),MyTree0001_Not_Metazoa-Dictyostelium_discoideum)); TREE 'NCBI_Tree1818_Eukaryota' = [&R] ((((MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Toxoplasma_gondii),MyTree0001_Not_Metazoa-Group_19),(((MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Group_8),((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_2)),(MyTree0001_Metazoa-Group_2,((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_0),((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_15)))),((((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,NCBI_Entire-Group_259),Arceuthobium_verticilliflorum),MyTree0001_Not_Metazoa-Group_13),((NCBI_Entire-Group_275,NCBI_Entire-Group_277,NCBI_Entire-Group_279),NCBI_Entire-Group_282)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum,NCBI_Entire-Group_004,NCBI_Entire-Group_289),Bacteria,Archaea); TREE 'Tree1819_Fungi' = [&R] (Archaea,Bacteria,((Metazoa,((((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),NCBI_Entire-Group_252),Schizosaccharomyces_pombe),((((MyTree0001_Not_Metazoa-Group_2,MyTree0001_Not_Metazoa-Group_5),MyTree0001_Not_Metazoa-Group_6),MyTree0001_Not_Metazoa-Group_8),MyTree0001_Not_Metazoa-Cryptococcus_neoformans))),Viridiplantae)); TREE 'NCBI_Tree1819_Fungi' = [&R] (((((MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Group_8),((MyTree0001_Not_Metazoa-Group_2,MyTree0001_Not_Metazoa-Group_5),Schizosaccharomyces_pombe,(MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6),NCBI_Entire-Group_252),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1819_Metazoa' = [&R] (Archaea,Bacteria,((((((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_14)),MyTree0001_Metazoa-Group_3),((MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Strongylocentrotus_purpuratus)),Fungi),Viridiplantae)); TREE 'NCBI_Tree1819_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15),((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Strongylocentrotus_purpuratus)),MyTree0001_Metazoa-Group_2)))); TREE 'Tree1819_Not_Fungi_Metazoa_Viridiplantae' = [&R] (Archaea,Bacteria,((Paramecium_tetraurelia,MyTree0001_Not_Metazoa-Group_17),(Tetrahymena_pyriformis,(Giardia_lamblia,(((MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15),Euglena_gracilis),((((Metazoa,Fungi),Viridiplantae),MyTree0001_Not_Metazoa-Toxoplasma_gondii),NCBI_Entire-Group_289)))),NCBI_Entire-Group_005)); TREE 'NCBI_Tree1819_Not_Fungi_Metazoa_Viridiplantae' = [&R] ((Giardia_lamblia,(Fungi,Metazoa),((MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Toxoplasma_gondii),((Tetrahymena_pyriformis,Paramecium_tetraurelia),NCBI_Entire-Group_005)),(Euglena_gracilis,(MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15)),Viridiplantae,NCBI_Entire-Group_289),Bacteria,Archaea); TREE 'Tree1819_Viridiplantae' = [&R] (Archaea,Bacteria,((Metazoa,Fungi),((((NCBI_Entire-Group_282,NCBI_Entire-Group_283),NCBI_Entire-Group_275),NCBI_Entire-Group_281),((Sorghum_bicolor,Oryza_sativa),(Zea_mays,((Anemia_phyllitidis,(Nicotiana_tabacum,(Solanum_tuberosum,Pisum_sativum))),(Glycine_max,MyTree0001_Not_Metazoa-Arabidopsis_thaliana))))))); TREE 'NCBI_Tree1819_Viridiplantae' = [&R] (Archaea,Bacteria,(((((NCBI_Entire-Group_281,NCBI_Entire-Group_282),NCBI_Entire-Group_275),NCBI_Entire-Group_283),(Anemia_phyllitidis,((Oryza_sativa,(Sorghum_bicolor,Zea_mays)),((Nicotiana_tabacum,Solanum_tuberosum),((Glycine_max,Pisum_sativum),MyTree0001_Not_Metazoa-Arabidopsis_thaliana))))),(Fungi,Metazoa))); TREE 'Tree1820_Eukaryota' = [&R] (Archaea,Bacteria,((MyTree0001_Not_Metazoa-Group_19,((Babesia_bovis,MyTree0001_Not_Metazoa-Group_17),(((Polytomella_agilis,(((Chlamydomonas_incerta,Chlamydomonas_reinhardtii),NCBI_Entire-Group_275),NCBI_Entire-Group_281)),((Glycine_max,MyTree0001_Not_Metazoa-Group_13),((((Pisum_sativum,NCBI_Entire-Group_260),NCBI_Entire-Group_270),(Anemia_phyllitidis,MyTree0001_Not_Metazoa-Daucus_carota)),MyTree0001_Not_Metazoa-Arabidopsis_thaliana))),(((MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Onchocerca_volvulus),((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_1),(MyTree0001_Metazoa-Group_15,(((MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_6)))),(((((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),Schizosaccharomyces_pombe),MyTree0001_Not_Metazoa-Group_11),MyTree0001_Not_Metazoa-Group_5),((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_146),(MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_237))))),MyTree0001_Not_Metazoa-Dictyostelium_discoideum)),NCBI_Entire-Group_005,NCBI_Entire-Group_286)); TREE 'NCBI_Tree1820_Eukaryota' = [&R] ((((MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_005),(MyTree0001_Not_Metazoa-Group_17,Babesia_bovis)),(((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_146),((MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246),((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),MyTree0001_Not_Metazoa-Group_2),Schizosaccharomyces_pombe)),(((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_1),(MyTree0001_Metazoa-Group_15,(((MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5))),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Onchocerca_volvulus))),((((((Pisum_sativum,Glycine_max,NCBI_Entire-Group_260),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),(MyTree0001_Not_Metazoa-Daucus_carota,NCBI_Entire-Group_270)),MyTree0001_Not_Metazoa-Group_13),Anemia_phyllitidis),(((Polytomella_agilis,Chlamydomonas_reinhardtii,Chlamydomonas_incerta),NCBI_Entire-Group_281),NCBI_Entire-Group_275)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum,NCBI_Entire-Group_286),Bacteria,Archaea); TREE 'Tree1823_Archaea' = [&R] (Bacteria,(Eukaryota,(Aeropyrum_pernix,(MyTree0000-Desulfurococcus_amylolyticus,MyTree0000-Group_1)),((NCBI_Entire-Group_298,NCBI_Entire-Group_297),MyTree0000-Group_2))); TREE 'NCBI_Tree1823_Archaea' = [&R] ((((Aeropyrum_pernix,MyTree0000-Desulfurococcus_amylolyticus),MyTree0000-Group_1),(MyTree0000-Group_2,NCBI_Entire-Group_297,NCBI_Entire-Group_298)),Bacteria,Eukaryota); TREE 'Tree1823_Fungi' = [&R] (Bacteria,((((((Absidia_glauca,(Mucor_hiemalis,Mucor_mucedo,Rhizopus_oryzae)),Umbelopsis),((((((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),((MyTree0001_Not_Metazoa-Group_3,MyTree0001_Not_Metazoa-Group_7,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_2)),((Eremothecium_gossypii,(Saccharomyces_cerevisiae,Saccharomyces_kluyveri)),MyTree0001_Not_Metazoa-Group_11)),Schizosaccharomyces_pombe),(((NCBI_Entire-Group_140,NCBI_Entire-Group_146),Phaffia_rhodozyma),(NCBI_Entire-Group_125,NCBI_Entire-Group_129))),NCBI_Entire-Group_249)),Metazoa),Viridiplantae),Archaea)); TREE 'NCBI_Tree1823_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Umbelopsis,(Absidia_glauca,Mucor_hiemalis,Mucor_mucedo,Rhizopus_oryzae)),NCBI_Entire-Group_249),(Schizosaccharomyces_pombe,((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),((MyTree0001_Not_Metazoa-Group_3,MyTree0001_Not_Metazoa-Group_7,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_2)),((Eremothecium_gossypii,Saccharomyces_cerevisiae,Saccharomyces_kluyveri),MyTree0001_Not_Metazoa-Group_11)),((NCBI_Entire-Group_125,NCBI_Entire-Group_129),(Phaffia_rhodozyma,(NCBI_Entire-Group_140,NCBI_Entire-Group_146))))))); TREE 'Tree1823_Not_Fungi' = [&R] (Archaea,Bacteria,((((Fungi,(NCBI_Entire-Group_109,(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_5,MyTree0001_Metazoa-Group_7))))),((((((NCBI_Entire-Group_004,Achlya_bisexualis),NCBI_Entire-Group_003),NCBI_Entire-Group_279),(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_12),MyTree0001_Not_Metazoa-Group_13),NCBI_Entire-Group_255)),NCBI_Entire-Group_256),NCBI_Entire-Group_002)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum),MyTree0001_Not_Metazoa-Entamoeba_histolytica)); TREE 'NCBI_Tree1823_Not_Fungi' = [&R] ((((NCBI_Entire-Group_004,Achlya_bisexualis),NCBI_Entire-Group_003),((NCBI_Entire-Group_109,(MyTree0001_Metazoa-Group_2,((MyTree0001_Metazoa-Group_5,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_3))),Fungi),(NCBI_Entire-Group_279,(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_12),MyTree0001_Not_Metazoa-Group_13),NCBI_Entire-Group_256),NCBI_Entire-Group_255),MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica,NCBI_Entire-Group_002),Bacteria,Archaea); TREE 'Tree1824_Eukaryota' = [&R] (Archaea,Bacteria,(((((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_5),NCBI_Entire-Group_096),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109),(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_13),(NCBI_Entire-Group_256,NCBI_Entire-Group_258)),NCBI_Entire-Group_255),((((((Schizosaccharomyces_pombe,NCBI_Entire-Group_156),MyTree0001_Not_Metazoa-Group_6),(((MyTree0001_Not_Metazoa-Group_2,MyTree0001_Not_Metazoa-Group_5),(NCBI_Entire-Group_220,NCBI_Entire-Group_222)),MyTree0001_Not_Metazoa-Group_10)),((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_139),MyTree0001_Not_Metazoa-Ustilago_maydis)),(((NCBI_Entire-Group_121,Endogone_pisiformis),NCBI_Entire-Group_254),NCBI_Entire-Group_249)),((NCBI_Entire-Group_251,((Mucor_hiemalis,Rhizopus_oryzae),Absidia_glauca)),((NCBI_Entire-Group_248,Furculomyces_boomerangus),NCBI_Entire-Group_250)),NCBI_Entire-Group_253))); TREE 'NCBI_Tree1824_Eukaryota' = [&R] (((((((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_5),NCBI_Entire-Group_096),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109),(((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_139),MyTree0001_Not_Metazoa-Ustilago_maydis),(MyTree0001_Not_Metazoa-Group_10,((NCBI_Entire-Group_220,NCBI_Entire-Group_222),MyTree0001_Not_Metazoa-Group_2,MyTree0001_Not_Metazoa-Group_5),Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_156),((NCBI_Entire-Group_248,Furculomyces_boomerangus),(NCBI_Entire-Group_250,NCBI_Entire-Group_251,(Rhizopus_oryzae,Mucor_hiemalis,Absidia_glauca),NCBI_Entire-Group_249,Endogone_pisiformis)),(NCBI_Entire-Group_254,NCBI_Entire-Group_253),NCBI_Entire-Group_121)),((((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_13),NCBI_Entire-Group_258),NCBI_Entire-Group_256),NCBI_Entire-Group_255)),Bacteria,Archaea); TREE 'Tree1845_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(MyTree0001_Not_Metazoa-Group_5,((((((((((Lasiosphaeria_ovina,MyTree0001_Not_Metazoa-Group_2),Cercophora_newfieldiana),(NCBI_Entire-Group_164,NCBI_Entire-Group_160)),((((((((Gnomoniella_fraxini,Gnomonia_setacea),Discula_destructiva),NCBI_Entire-Group_176),Endothia_gyrosa),NCBI_Entire-Group_177),NCBI_Entire-Group_174),((Diaporthe_medusaea,Diaporthe_eres),Diaporthe_arctii)),(Leucostoma_niveum,(Valsa_mali,(Valsa_germanica,Valsa_ambiens))))),MyTree0001_Not_Metazoa-Magnaporthe_grisea),(NCBI_Entire-Group_170,Aniptodera_chesapeakensis)),(NCBI_Entire-Group_167,((Plectosphaerella_cucumerina,NCBI_Entire-Group_185),Glomerella_cingulata))),((MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),NCBI_Entire-Group_184)),Halosphaeria_appendiculata),NCBI_Entire-Group_212))))); TREE 'NCBI_Tree1845_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((NCBI_Entire-Group_177,NCBI_Entire-Group_176),(Discula_destructiva,Gnomonia_setacea,Gnomoniella_fraxini),(Diaporthe_arctii,Diaporthe_eres,Diaporthe_medusaea,Endothia_gyrosa,Leucostoma_niveum,Valsa_ambiens,Valsa_germanica,Valsa_mali),NCBI_Entire-Group_174),((Cercophora_newfieldiana,Lasiosphaeria_ovina),MyTree0001_Not_Metazoa-Group_2),(NCBI_Entire-Group_170,NCBI_Entire-Group_167)),(Aniptodera_chesapeakensis,Halosphaeria_appendiculata),((((Glomerella_cingulata,Plectosphaerella_cucumerina),NCBI_Entire-Group_185),NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182)),(NCBI_Entire-Group_164,NCBI_Entire-Group_160),MyTree0001_Not_Metazoa-Magnaporthe_grisea,NCBI_Entire-Group_212),MyTree0001_Not_Metazoa-Group_5)))); TREE 'Tree1846.1_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Taphrina_populina,(Taphrina_virginica,Taphrina_deformans)),(Protomyces_inouyei,Protomyces_gravidus)),(((Glomerella_cingulata,Glomerella_graminicola),((((MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_2),((((NCBI_Entire-Group_212,NCBI_Entire-Group_207),Blumeria_graminis),NCBI_Entire-Group_208),((Erysiphe_pisi,NCBI_Entire-Group_195),(Rhynchosporium_secalis,(MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237)))))),((Pneumocystis_carinii,(Neolecta_vitellina,Neolecta_irregularis)),(Saitoella_complicata,(Schizosaccharomyces_pombe,((NCBI_Entire-Group_246,NCBI_Entire-Group_247),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11))))))),Pleurotus_sajor-caju),Coprinus_cinereus),NCBI_Entire-Group_146)))); TREE 'NCBI_Tree1846.1_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Neolecta_irregularis,Neolecta_vitellina,Pneumocystis_carinii,Saitoella_complicata,Schizosaccharomyces_pombe,((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),(((((Glomerella_cingulata,Glomerella_graminicola,Rhynchosporium_secalis),NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_2),(Blumeria_graminis,Erysiphe_pisi),((NCBI_Entire-Group_207,NCBI_Entire-Group_208),NCBI_Entire-Group_212),NCBI_Entire-Group_195)),(Protomyces_gravidus,Protomyces_inouyei,Taphrina_deformans,Taphrina_populina,Taphrina_virginica),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246,NCBI_Entire-Group_247)),(Coprinus_cinereus,Pleurotus_sajor-caju,NCBI_Entire-Group_146))))); TREE 'Tree1846.2_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Taphrina_populina,(Taphrina_virginica,Taphrina_deformans)),(Protomyces_inouyei,Protomyces_gravidus)),((Glomerella_cingulata,(((Glomerella_graminicola,((MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),NCBI_Entire-Group_184)),MyTree0001_Not_Metazoa-Group_2),((((NCBI_Entire-Group_212,NCBI_Entire-Group_207),Blumeria_graminis),NCBI_Entire-Group_208),((Erysiphe_pisi,NCBI_Entire-Group_195),(Rhynchosporium_secalis,(MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237)))))),((Pneumocystis_carinii,(Neolecta_vitellina,Neolecta_irregularis)),(Saitoella_complicata,(Schizosaccharomyces_pombe,((NCBI_Entire-Group_246,NCBI_Entire-Group_247),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11))))))),Pleurotus_sajor-caju),Coprinus_cinereus),NCBI_Entire-Group_146)))); TREE 'NCBI_Tree1846.2_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Neolecta_irregularis,Neolecta_vitellina,Pneumocystis_carinii,Saitoella_complicata,Schizosaccharomyces_pombe,((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),(((((Glomerella_cingulata,Glomerella_graminicola,Rhynchosporium_secalis),NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_2),(Blumeria_graminis,Erysiphe_pisi),((NCBI_Entire-Group_207,NCBI_Entire-Group_208),NCBI_Entire-Group_212),NCBI_Entire-Group_195)),(Protomyces_gravidus,Protomyces_inouyei,Taphrina_deformans,Taphrina_populina,Taphrina_virginica),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246,NCBI_Entire-Group_247)),(Coprinus_cinereus,Pleurotus_sajor-caju,NCBI_Entire-Group_146))))); TREE 'Tree1846.3_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Coprinus_cinereus,(Pleurotus_sajor-caju,(((((((MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11),(NCBI_Entire-Group_246,NCBI_Entire-Group_247)),Schizosaccharomyces_pombe),Saitoella_complicata),((Neolecta_irregularis,Neolecta_vitellina),Pneumocystis_carinii)),(((((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),Rhynchosporium_secalis),(Erysiphe_pisi,NCBI_Entire-Group_195)),((Blumeria_graminis,(NCBI_Entire-Group_212,NCBI_Entire-Group_207)),NCBI_Entire-Group_208)),((((MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),NCBI_Entire-Group_184),(Glomerella_graminicola,Glomerella_cingulata)),MyTree0001_Not_Metazoa-Group_2))),((Protomyces_gravidus,Protomyces_inouyei),((Taphrina_deformans,Taphrina_virginica),Taphrina_populina))))),NCBI_Entire-Group_146)))); TREE 'NCBI_Tree1846.3_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Neolecta_irregularis,Neolecta_vitellina,Pneumocystis_carinii,Saitoella_complicata,Schizosaccharomyces_pombe,((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),(((((Glomerella_cingulata,Glomerella_graminicola,Rhynchosporium_secalis),NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_2),(Blumeria_graminis,Erysiphe_pisi),((NCBI_Entire-Group_207,NCBI_Entire-Group_208),NCBI_Entire-Group_212),NCBI_Entire-Group_195)),(Protomyces_gravidus,Protomyces_inouyei,Taphrina_deformans,Taphrina_populina,Taphrina_virginica),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246,NCBI_Entire-Group_247)),(Coprinus_cinereus,Pleurotus_sajor-caju,NCBI_Entire-Group_146))))); TREE 'Tree1846.4_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Taphrina_populina,(Taphrina_virginica,Taphrina_deformans)),(Protomyces_inouyei,Protomyces_gravidus)),((Glomerella_graminicola,(((Glomerella_cingulata,((MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),NCBI_Entire-Group_184)),MyTree0001_Not_Metazoa-Group_2),((((NCBI_Entire-Group_212,NCBI_Entire-Group_207),Blumeria_graminis),NCBI_Entire-Group_208),((Erysiphe_pisi,NCBI_Entire-Group_195),(Rhynchosporium_secalis,(MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237)))))),((Pneumocystis_carinii,(Neolecta_vitellina,Neolecta_irregularis)),(Saitoella_complicata,(Schizosaccharomyces_pombe,((NCBI_Entire-Group_246,NCBI_Entire-Group_247),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11))))))),Pleurotus_sajor-caju),Coprinus_cinereus),NCBI_Entire-Group_146)))); TREE 'NCBI_Tree1846.4_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Neolecta_irregularis,Neolecta_vitellina,Pneumocystis_carinii,Saitoella_complicata,Schizosaccharomyces_pombe,((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),(((((Glomerella_cingulata,Glomerella_graminicola,Rhynchosporium_secalis),NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_2),(Blumeria_graminis,Erysiphe_pisi),((NCBI_Entire-Group_207,NCBI_Entire-Group_208),NCBI_Entire-Group_212),NCBI_Entire-Group_195)),(Protomyces_gravidus,Protomyces_inouyei,Taphrina_deformans,Taphrina_populina,Taphrina_virginica),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246,NCBI_Entire-Group_247)),(Coprinus_cinereus,Pleurotus_sajor-caju,NCBI_Entire-Group_146))))); TREE 'Tree1846.5_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Coprinus_cinereus,(Pleurotus_sajor-caju,(((((((MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11),(NCBI_Entire-Group_246,NCBI_Entire-Group_247)),Schizosaccharomyces_pombe),Saitoella_complicata),((Neolecta_irregularis,Neolecta_vitellina),Pneumocystis_carinii)),(((((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),Rhynchosporium_secalis),(Erysiphe_pisi,NCBI_Entire-Group_195)),((Blumeria_graminis,(NCBI_Entire-Group_212,NCBI_Entire-Group_207)),NCBI_Entire-Group_208)),((((MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),NCBI_Entire-Group_184),(Glomerella_graminicola,Glomerella_cingulata)),MyTree0001_Not_Metazoa-Group_2))),((Protomyces_gravidus,Protomyces_inouyei),((Taphrina_deformans,Taphrina_virginica),Taphrina_populina))))),NCBI_Entire-Group_146)))); TREE 'NCBI_Tree1846.5_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Neolecta_irregularis,Neolecta_vitellina,Pneumocystis_carinii,Saitoella_complicata,Schizosaccharomyces_pombe,((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_237),(((((Glomerella_cingulata,Glomerella_graminicola,Rhynchosporium_secalis),NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_2),(Blumeria_graminis,Erysiphe_pisi),((NCBI_Entire-Group_207,NCBI_Entire-Group_208),NCBI_Entire-Group_212),NCBI_Entire-Group_195)),(Protomyces_gravidus,Protomyces_inouyei,Taphrina_deformans,Taphrina_populina,Taphrina_virginica),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246,NCBI_Entire-Group_247)),(Coprinus_cinereus,Pleurotus_sajor-caju,NCBI_Entire-Group_146))))); TREE 'Tree1860_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(MyTree0001_Not_Metazoa-Group_10,((NCBI_Entire-Group_216,NCBI_Entire-Group_218),(((((MyTree0001_Not_Metazoa-Coccidioides_immitis,MyTree0001_Not_Metazoa-Group_5),(NCBI_Entire-Group_240,NCBI_Entire-Group_241)),(Phaeotrichum_benjaminii,((NCBI_Entire-Group_163,NCBI_Entire-Group_199),((Pleomassaria_siparia,NCBI_Entire-Group_209),NCBI_Entire-Group_205)))),(((Daldinia_concentrica,(Xylaria_hypoxylon,NCBI_Entire-Group_160)),((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),((NCBI_Entire-Group_178,NCBI_Entire-Group_184),(NCBI_Entire-Group_167,NCBI_Entire-Group_179)))),NCBI_Entire-Group_187)),(NCBI_Entire-Group_225,(NCBI_Entire-Group_228,NCBI_Entire-Group_223)))),NCBI_Entire-Group_246)))); TREE 'NCBI_Tree1860_Fungi' = [&R] ((((((((Daldinia_concentrica,Xylaria_hypoxylon),NCBI_Entire-Group_160,NCBI_Entire-Group_163),(((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),NCBI_Entire-Group_167,NCBI_Entire-Group_178),NCBI_Entire-Group_179,NCBI_Entire-Group_184),((Phaeotrichum_benjaminii,Pleomassaria_siparia,NCBI_Entire-Group_205,NCBI_Entire-Group_209),NCBI_Entire-Group_199),NCBI_Entire-Group_187),(NCBI_Entire-Group_216,NCBI_Entire-Group_218),(NCBI_Entire-Group_223,NCBI_Entire-Group_225,NCBI_Entire-Group_228),(MyTree0001_Not_Metazoa-Coccidioides_immitis,MyTree0001_Not_Metazoa-Group_5),(NCBI_Entire-Group_240,NCBI_Entire-Group_241)),(MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246)),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1907_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Agaricus_bisporus,(((Amanita_muscaria,Cortinarius_iodes),((Entoloma_strictius,Pluteus_petasatus),((((Schizophyllum_commune,NCBI_Entire-Group_147),(Henningsomyces_candidus,Nia_vibrissa)),(NCBI_Entire-Group_145,Pleurotus_ostreatus)),(Laccaria_amethystina,NCBI_Entire-Group_141)))),Lycoperdon))))); TREE 'NCBI_Tree1907_Fungi' = [&R] ((((Nia_vibrissa,Lycoperdon,(Entoloma_strictius,Cortinarius_iodes,Pluteus_petasatus,NCBI_Entire-Group_145,Amanita_muscaria,Laccaria_amethystina,Agaricus_bisporus,(Henningsomyces_candidus,Schizophyllum_commune),Pleurotus_ostreatus),NCBI_Entire-Group_141,NCBI_Entire-Group_147),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1935_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((NCBI_Entire-Group_140,NCBI_Entire-Group_139),(Cyathus_striatus,MyTree0001_Not_Metazoa-Group_8)),Gautieria_otthii)))); TREE 'NCBI_Tree1935_Fungi' = [&R] ((((Gautieria_otthii,(NCBI_Entire-Group_140,NCBI_Entire-Group_139),Cyathus_striatus,MyTree0001_Not_Metazoa-Group_8),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1946_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((((((((Agaricus_bisporus,Lycoperdon),(Cortinarius_iodes,Laccaria_amethystina)),Typhula_phacorhiza),(Entoloma_strictius,Pluteus_petasatus)),(Amanita_muscaria,((Henningsomyces_candidus,Nia_vibrissa),Schizophyllum_commune))),NCBI_Entire-Group_145),((Boletus_satanas,NCBI_Entire-Group_140),Tapinella_panuoides)),(((Heterobasidion_annosum_species_complex,NCBI_Entire-Group_153),((Echinodontium_tinctorium,(NCBI_Entire-Group_149,Russula_compacta)),Auriscalpium_vulgare)),(NCBI_Entire-Group_142,NCBI_Entire-Group_152))),(((NCBI_Entire-Group_132,NCBI_Entire-Group_133),NCBI_Entire-Group_143),Thelephora)),((Antrodia_carbonica,Fomitopsis_pinicola),NCBI_Entire-Group_151)),Panus_rudis),NCBI_Entire-Group_144),(Bjerkandera_adusta,Ceriporia_purpurea))))); TREE 'NCBI_Tree1946_Fungi' = [&R] (((((NCBI_Entire-Group_132,NCBI_Entire-Group_133),(Nia_vibrissa,(Tapinella_panuoides,Boletus_satanas,NCBI_Entire-Group_140),(Typhula_phacorhiza,Thelephora),Echinodontium_tinctorium,NCBI_Entire-Group_142,(NCBI_Entire-Group_143,NCBI_Entire-Group_144),Lycoperdon,(Entoloma_strictius,Cortinarius_iodes,Pluteus_petasatus,NCBI_Entire-Group_145,Amanita_muscaria,Russula_compacta,Laccaria_amethystina,Agaricus_bisporus,(Heterobasidion_annosum_species_complex,Henningsomyces_candidus,Schizophyllum_commune)),(NCBI_Entire-Group_149,Panus_rudis,Auriscalpium_vulgare,((Fomitopsis_pinicola,Ceriporia_purpurea,Antrodia_carbonica,Bjerkandera_adusta),NCBI_Entire-Group_152,NCBI_Entire-Group_153),NCBI_Entire-Group_151))),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1948_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((((((((((Agaricus_bisporus,Lycoperdon),(Cortinarius_iodes,Laccaria_amethystina)),Typhula_phacorhiza),(Entoloma_strictius,Pluteus_petasatus)),(Amanita_muscaria,((Henningsomyces_candidus,Nia_vibrissa),Schizophyllum_commune))),(Pleurotus_ostreatus,Pleurotus_tuberregium)),NCBI_Entire-Group_145),((Boletus_satanas,NCBI_Entire-Group_140),Tapinella_panuoides)),((((Auriscalpium_vulgare,Heterobasidion_annosum_species_complex),(Echinodontium_tinctorium,(NCBI_Entire-Group_149,Russula_compacta))),NCBI_Entire-Group_153),(NCBI_Entire-Group_142,NCBI_Entire-Group_152))),(((NCBI_Entire-Group_132,NCBI_Entire-Group_133),NCBI_Entire-Group_143),Thelephora)),(((Antrodia_carbonica,Laetiporus_sulphureus),Fomitopsis_pinicola),NCBI_Entire-Group_151)),Panus_rudis),NCBI_Entire-Group_144),((Bjerkandera_adusta,NCBI_Entire-Group_154),Ceriporia_purpurea))))); TREE 'NCBI_Tree1948_Fungi' = [&R] (((((NCBI_Entire-Group_132,NCBI_Entire-Group_133),(Nia_vibrissa,(Tapinella_panuoides,Boletus_satanas,NCBI_Entire-Group_140),(Typhula_phacorhiza,Thelephora),Echinodontium_tinctorium,NCBI_Entire-Group_142,(NCBI_Entire-Group_143,NCBI_Entire-Group_144),Lycoperdon,(Entoloma_strictius,Cortinarius_iodes,Pluteus_petasatus,NCBI_Entire-Group_145,Amanita_muscaria,Russula_compacta,Pleurotus_tuberregium,Laccaria_amethystina,Agaricus_bisporus,(Heterobasidion_annosum_species_complex,Henningsomyces_candidus,Schizophyllum_commune),Pleurotus_ostreatus),(NCBI_Entire-Group_149,Panus_rudis,Auriscalpium_vulgare,((Fomitopsis_pinicola,Ceriporia_purpurea,Antrodia_carbonica,Laetiporus_sulphureus,Bjerkandera_adusta),(NCBI_Entire-Group_153,NCBI_Entire-Group_154),NCBI_Entire-Group_152),NCBI_Entire-Group_151))),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree1980_Archaea' = [&R] ((((MyTree0000-Desulfurococcus_amylolyticus,MyTree0000-Group_1),((NCBI_Entire-Group_298,NCBI_Entire-Group_295),MyTree0000-Group_0)),Bacteria),Eukaryota); TREE 'NCBI_Tree1980_Archaea' = [&R] (((MyTree0000-Desulfurococcus_amylolyticus,MyTree0000-Group_1),(MyTree0000-Group_0,NCBI_Entire-Group_298,NCBI_Entire-Group_295)),Bacteria,Eukaryota); TREE 'Tree1980_Bacteria' = [&R] ((Archaea,(((((((Helicobacter_pylori,NCBI_Entire-Group_301),NCBI_Entire-Group_322),((NCBI_Entire-Group_300,NCBI_Entire-Group_303),NCBI_Entire-Group_302)),(NCBI_Entire-Group_310,NCBI_Entire-Group_339)),(NCBI_Entire-Group_318,NCBI_Entire-Group_331)),NCBI_Entire-Group_304),NCBI_Entire-Group_306)),Eukaryota); TREE 'NCBI_Tree1980_Bacteria' = [&R] (Eukaryota,((NCBI_Entire-Group_318,Helicobacter_pylori,NCBI_Entire-Group_322,NCBI_Entire-Group_331),(NCBI_Entire-Group_306,NCBI_Entire-Group_310),NCBI_Entire-Group_300,NCBI_Entire-Group_301,NCBI_Entire-Group_302,NCBI_Entire-Group_303,NCBI_Entire-Group_304,NCBI_Entire-Group_339),Archaea); TREE 'Tree1980_Eukaryota' = [&R] ((Archaea,(Zea_mays,Bacteria)),((((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_2),((Prorocentrum_micans,MyTree0001_Not_Metazoa-Group_19),MyTree0001_Not_Metazoa-Dictyostelium_discoideum)),(MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_7)),((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(Oryza_sativa,MyTree0001_Not_Metazoa-Arabidopsis_thaliana)))); TREE 'NCBI_Tree1980_Eukaryota' = [&R] ((((Zea_mays,Oryza_sativa),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),(Prorocentrum_micans,MyTree0001_Not_Metazoa-Group_19),((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(MyTree0001_Metazoa-Group_2,((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_3))),MyTree0001_Not_Metazoa-Dictyostelium_discoideum),Bacteria,Archaea); TREE 'Tree2005_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((MyTree0001_Metazoa-Ixodes_scapularis,NCBI_Entire-Group_067),MyTree0001_Metazoa-Group_1),(Lepidodermella_squammata,((((((NCBI_Entire-Group_068,NCBI_Entire-Group_073),NCBI_Entire-Group_098),NCBI_Entire-Group_076),((Terebratalia_transversa,NCBI_Entire-Group_080),NCBI_Entire-Group_102)),Limicolaria_kambeul),NCBI_Entire-Group_104),(MyTree0001_Metazoa-Group_16,(((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_4),Branchiostoma_floridae)))),Saccoglossus_kowalevskii),NCBI_Entire-Group_112),NCBI_Entire-Group_108)))); TREE 'NCBI_Tree2005_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((MyTree0001_Metazoa-Group_16,(Lepidodermella_squammata,NCBI_Entire-Group_104),((Terebratalia_transversa,(((NCBI_Entire-Group_076,NCBI_Entire-Group_080),NCBI_Entire-Group_073),NCBI_Entire-Group_068),(Limicolaria_kambeul,NCBI_Entire-Group_098),(MyTree0001_Metazoa-Group_1,MyTree0001_Metazoa-Ixodes_scapularis),NCBI_Entire-Group_067,NCBI_Entire-Group_102),(Saccoglossus_kowalevskii,(Branchiostoma_floridae,((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_4))))),NCBI_Entire-Group_108),NCBI_Entire-Group_112)))); TREE 'Tree2006_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Lepidodermella_squammata,((MyTree0001_Metazoa-Group_16,Terebratalia_transversa,(NCBI_Entire-Group_076,NCBI_Entire-Group_102),NCBI_Entire-Group_104),Limicolaria_kambeul,((NCBI_Entire-Group_080,NCBI_Entire-Group_098),NCBI_Entire-Group_068),((MyTree0001_Metazoa-Group_1,MyTree0001_Metazoa-Ixodes_scapularis),NCBI_Entire-Group_067),(Saccoglossus_kowalevskii,(((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_4),Branchiostoma_floridae)),NCBI_Entire-Group_073)),NCBI_Entire-Group_112),NCBI_Entire-Group_108)))); TREE 'NCBI_Tree2006_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((MyTree0001_Metazoa-Group_16,(Lepidodermella_squammata,NCBI_Entire-Group_104),((Terebratalia_transversa,(((NCBI_Entire-Group_076,NCBI_Entire-Group_080),NCBI_Entire-Group_073),NCBI_Entire-Group_068),(Limicolaria_kambeul,NCBI_Entire-Group_098),(MyTree0001_Metazoa-Group_1,MyTree0001_Metazoa-Ixodes_scapularis),NCBI_Entire-Group_067,NCBI_Entire-Group_102),(Saccoglossus_kowalevskii,(Branchiostoma_floridae,((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_4))))),NCBI_Entire-Group_108),NCBI_Entire-Group_112)))); TREE 'Tree2007_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((NCBI_Entire-Group_108,NCBI_Entire-Group_112),((((MyTree0001_Metazoa-Group_1,MyTree0001_Metazoa-Ixodes_scapularis),NCBI_Entire-Group_067),(Lepidodermella_squammata,(MyTree0001_Metazoa-Group_16,(((Limicolaria_kambeul,((NCBI_Entire-Group_068,NCBI_Entire-Group_073),NCBI_Entire-Group_076,NCBI_Entire-Group_098)),NCBI_Entire-Group_080,NCBI_Entire-Group_102),(Terebratalia_transversa,NCBI_Entire-Group_104))))),(Saccoglossus_kowalevskii,(((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_4),Branchiostoma_floridae))))))); TREE 'NCBI_Tree2007_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((MyTree0001_Metazoa-Group_16,(Lepidodermella_squammata,NCBI_Entire-Group_104),((Terebratalia_transversa,(((NCBI_Entire-Group_076,NCBI_Entire-Group_080),NCBI_Entire-Group_073),NCBI_Entire-Group_068),(Limicolaria_kambeul,NCBI_Entire-Group_098),(MyTree0001_Metazoa-Group_1,MyTree0001_Metazoa-Ixodes_scapularis),NCBI_Entire-Group_067,NCBI_Entire-Group_102),(Saccoglossus_kowalevskii,(Branchiostoma_floridae,((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_4))))),NCBI_Entire-Group_108),NCBI_Entire-Group_112)))); TREE 'Tree2022_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((Pichia_angusta,(Eremothecium_gossypii,NCBI_Entire-Group_246)),(((Neolecta_vitellina,Neolecta_irregularis),(NCBI_Entire-Group_156,Pneumocystis_carinii)),MyTree0001_Not_Metazoa-Ustilago_maydis)),NCBI_Entire-Group_222),(((NCBI_Entire-Group_217,NCBI_Entire-Group_220),NCBI_Entire-Group_218),(((((((NCBI_Entire-Group_167,NCBI_Entire-Group_169),MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),(NCBI_Entire-Group_184,((Nectria_cinnabarina,(Nectria_haematococca,Fusarium_oxysporum)),NCBI_Entire-Group_182))),((((MyTree0001_Not_Metazoa-Group_2,MyTree0001_Not_Metazoa-Group_1),NCBI_Entire-Group_173),NCBI_Entire-Group_166),((MyTree0001_Not_Metazoa-Magnaporthe_grisea,NCBI_Entire-Group_178),NCBI_Entire-Group_170))),NCBI_Entire-Group_160),(((NCBI_Entire-Group_163,NCBI_Entire-Group_205),NCBI_Entire-Group_199),((Leptosphaeria_doliolum,(Leptosphaeria_maculans,NCBI_Entire-Group_212)),(((MyTree0001_Not_Metazoa-Coccidioides_immitis,NCBI_Entire-Group_237),(Thermoascus_aurantiacus,(Talaromyces_emersonii,(Paecilomyces_variotii,(((Eupenicillium_javanicum,Penicillium_chrysogenum),NCBI_Entire-Group_238),(Emericella_nidulans,(Aspergillus_fumigatus,(Eurotium_rubrum,Aspergillus_flavus)))))))),NCBI_Entire-Group_241)))),((NCBI_Entire-Group_165,NCBI_Entire-Group_195),NCBI_Entire-Group_186))))))); TREE 'NCBI_Tree2022_Fungi' = [&R] (((((NCBI_Entire-Group_156,(((NCBI_Entire-Group_160,NCBI_Entire-Group_163,NCBI_Entire-Group_165),(((NCBI_Entire-Group_167,NCBI_Entire-Group_169,NCBI_Entire-Group_170),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),NCBI_Entire-Group_178,NCBI_Entire-Group_166),((Nectria_haematococca,Nectria_cinnabarina,Fusarium_oxysporum),NCBI_Entire-Group_182,(MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_184))),(NCBI_Entire-Group_186,NCBI_Entire-Group_195),((((Leptosphaeria_doliolum,Leptosphaeria_maculans),NCBI_Entire-Group_205),NCBI_Entire-Group_212),NCBI_Entire-Group_199),MyTree0001_Not_Metazoa-Magnaporthe_grisea),(NCBI_Entire-Group_217,NCBI_Entire-Group_218,NCBI_Entire-Group_220,NCBI_Entire-Group_222),((MyTree0001_Not_Metazoa-Coccidioides_immitis,NCBI_Entire-Group_237),((Emericella_nidulans,Talaromyces_emersonii,Paecilomyces_variotii,Eupenicillium_javanicum,Eurotium_rubrum,Thermoascus_aurantiacus,Aspergillus_fumigatus,Penicillium_chrysogenum,Aspergillus_flavus),NCBI_Entire-Group_238)),NCBI_Entire-Group_241),Neolecta_irregularis,Neolecta_vitellina,((Eremothecium_gossypii,Pichia_angusta),NCBI_Entire-Group_246),Pneumocystis_carinii),MyTree0001_Not_Metazoa-Ustilago_maydis),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2027_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((NCBI_Entire-Group_182,NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_4),(Microascus_trigonosporus,(Petriella_setifera,NCBI_Entire-Group_167))),MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),(((Hypoxylon_atroroseum,Daldinia_concentrica),(Xylaria_hypoxylon,Xylaria_curta)),(((Neurospora_crassa,(Sordaria_fimicola,(MyTree0001_Not_Metazoa-Group_1,NCBI_Entire-Group_173))),(NCBI_Entire-Group_170,((Gaeumannomyces_graminis,Magnaporthe_salvinii),Magnaporthe_grisea))),(Endothia_gyrosa,(((Pleuroceras_pleurostylum,Apioplagiostoma_aceriferum,Linospora_capreae),NCBI_Entire-Group_176),(Amphiporthe_castanea,Discula_quercina,((Gnomonia_setacea,Gnomonia_padicola),(Plagiostoma_euphorbiae,Discula_campestris,Gnomoniella_fraxini))),Discula_destructiva,NCBI_Entire-Group_174),(Cryptodiaporthe_corni,((Leucostoma_persoonii,Valsa_ambiens),Apiognomonia_supraseptata),Cryphonectria_parasitica,Endothia_eugeniae,(Diaporthe_phaseolorum,Phomopsis_longicolla)))))),(MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_247),NCBI_Entire-Group_246)))); TREE 'NCBI_Tree2027_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Apiognomonia_supraseptata,Apioplagiostoma_aceriferum,Discula_campestris,Discula_destructiva,Discula_quercina,Gnomonia_padicola,Gnomonia_setacea,Gnomoniella_fraxini,Linospora_capreae,Plagiostoma_euphorbiae,Pleuroceras_pleurostylum),(Amphiporthe_castanea,Cryphonectria_parasitica,Cryptodiaporthe_corni,Diaporthe_phaseolorum,Endothia_eugeniae,Endothia_gyrosa,Leucostoma_persoonii,Phomopsis_longicolla,Valsa_ambiens),NCBI_Entire-Group_174,NCBI_Entire-Group_176),(MyTree0001_Not_Metazoa-Group_1,(Neurospora_crassa,Sordaria_fimicola),NCBI_Entire-Group_173),(NCBI_Entire-Group_170,(Microascus_trigonosporus,Petriella_setifera),NCBI_Entire-Group_167)),((MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_184),NCBI_Entire-Group_182,MyTree0001_Not_Metazoa-Group_4)),(Daldinia_concentrica,Hypoxylon_atroroseum,Xylaria_curta,Xylaria_hypoxylon),(Gaeumannomyces_graminis,Magnaporthe_grisea,Magnaporthe_salvinii)),(MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246,NCBI_Entire-Group_247))))); TREE 'Tree2030_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Calathella_mangrovei,((Favolaschia_pezizaeformis,((Fistulina_hepatica,Schizophyllum_commune),((Henningsomyces_candidus,Physalacria_maipoensis),((((Limnoperdon_incarnatum,(Entoloma_strictius,Pluteus_petasatus)),(((((((((Panus_rudis,NCBI_Entire-Group_144),(Bjerkandera_adusta,NCBI_Entire-Group_154)),(Fomitopsis_pinicola,NCBI_Entire-Group_151)),(((Sistotrema,NCBI_Entire-Group_143),NCBI_Entire-Group_133),(Sphaerobolus_stellatus,NCBI_Entire-Group_150))),(((Heterobasidion_annosum_species_complex,Russula_compacta),NCBI_Entire-Group_153),(Hyphodontia_alutaria,NCBI_Entire-Group_142))),((Boletus_satanas,NCBI_Entire-Group_140),Tapinella_panuoides)),NCBI_Entire-Group_145),(Pleurotus_ostreatus,Pleurotus_tuberregium)),NCBI_Entire-Group_141)),((Agaricus_bisporus,Lycoperdon),(Cortinarius_iodes,(Laccaria_amethystina,Cyathus_striatus)))),Amanita_muscaria)))),((Halocyphina_villosa,Nia_vibrissa),Merismodes_fasciculata)))))); TREE 'NCBI_Tree2030_Fungi' = [&R] (((((Nia_vibrissa,(Tapinella_panuoides,Boletus_satanas,NCBI_Entire-Group_140),Sphaerobolus_stellatus,Cyathus_striatus,NCBI_Entire-Group_141,(NCBI_Entire-Group_143,NCBI_Entire-Group_144),Lycoperdon,(Favolaschia_pezizaeformis,Calathella_mangrovei,Entoloma_strictius,Cortinarius_iodes,Pluteus_petasatus,NCBI_Entire-Group_145,Amanita_muscaria,Russula_compacta,Pleurotus_tuberregium,(Physalacria_maipoensis,Merismodes_fasciculata,Laccaria_amethystina),Agaricus_bisporus,(Heterobasidion_annosum_species_complex,Henningsomyces_candidus,Schizophyllum_commune),Pleurotus_ostreatus),((Limnoperdon_incarnatum,Halocyphina_villosa),Panus_rudis,Fistulina_hepatica,(Sistotrema,(Fomitopsis_pinicola,Bjerkandera_adusta),Hyphodontia_alutaria,(NCBI_Entire-Group_153,NCBI_Entire-Group_154)),NCBI_Entire-Group_150,NCBI_Entire-Group_151),NCBI_Entire-Group_142),NCBI_Entire-Group_133),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2033_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(NCBI_Entire-Group_222,(((NCBI_Entire-Group_209,NCBI_Entire-Group_210),(NCBI_Entire-Group_163,NCBI_Entire-Group_199)),(((NCBI_Entire-Group_187,NCBI_Entire-Group_195),((NCBI_Entire-Group_162,NCBI_Entire-Group_164),MyTree0001_Not_Metazoa-Group_2)),((((Gyalecta_jenensis,NCBI_Entire-Group_228),(((Pertusaria_scaberula,Pertusaria_erythrella),(NCBI_Entire-Group_223,Ochrolechia_parella)),MyTree0001_Not_Metazoa-Group_6)),NCBI_Entire-Group_229),((Glyphium_elatum,(Ceramothyrium_carniolicum,NCBI_Entire-Group_241)),(Eupenicillium_javanicum,(Eurotium_rubrum,(Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger,Aspergillus_nomius))))))),NCBI_Entire-Group_220)))); TREE 'NCBI_Tree2033_Fungi' = [&R] (((((((NCBI_Entire-Group_162,NCBI_Entire-Group_163,NCBI_Entire-Group_164),(NCBI_Entire-Group_187,NCBI_Entire-Group_195),((NCBI_Entire-Group_209,NCBI_Entire-Group_210),NCBI_Entire-Group_199),MyTree0001_Not_Metazoa-Group_2),(NCBI_Entire-Group_222,NCBI_Entire-Group_220),(Gyalecta_jenensis,NCBI_Entire-Group_223,(Pertusaria_erythrella,Pertusaria_scaberula,Ochrolechia_parella),NCBI_Entire-Group_228,NCBI_Entire-Group_229),(Aspergillus_nomius,Eupenicillium_javanicum,Eurotium_rubrum,Aspergillus_fumigatus,Aspergillus_niger,Aspergillus_flavus,Aspergillus_aculeatus),(Glyphium_elatum,Ceramothyrium_carniolicum,NCBI_Entire-Group_241)),MyTree0001_Not_Metazoa-Group_6),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2034_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_182),(NCBI_Entire-Group_164,((Neurospora_crassa,((Cercophora_septentrionalis,(Remersonia_thermophila,(Chaetomium_globosum,Chaetomium_gracile,Chaetomium_thermophilum),Thielavia_terrestris)),Podospora_anserina)),(((Ophiostoma_floccosum,Ophiostoma_ulmi,Ophiostoma_piliferum,Ophiostoma_piceae,(Ophiostoma_penicillatum,Ophiostoma_bicolor)),(Sporothrix_schenckii,Ophiostoma_stenoceras)),((Cryphonectria_parasitica,Cryphonectria_havanensis),Phomopsis_longicolla,Diaporthe_phaseolorum)))),NCBI_Entire-Group_169)))); TREE 'NCBI_Tree2034_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((Cryphonectria_havanensis,Cryphonectria_parasitica,Diaporthe_phaseolorum,Phomopsis_longicolla),(Neurospora_crassa,Remersonia_thermophila,(Chaetomium_globosum,Chaetomium_gracile,Chaetomium_thermophilum,Thielavia_terrestris),(Cercophora_septentrionalis,Podospora_anserina)),((Ophiostoma_bicolor,Ophiostoma_floccosum,Ophiostoma_penicillatum,Ophiostoma_piceae,Ophiostoma_piliferum,Ophiostoma_stenoceras,Ophiostoma_ulmi,Sporothrix_schenckii),NCBI_Entire-Group_169)),(MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_182)),NCBI_Entire-Group_164)))); TREE 'Tree2035_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((NCBI_Entire-Group_178,NCBI_Entire-Group_170),(MyTree0001_Not_Metazoa-Group_1,NCBI_Entire-Group_173)),NCBI_Entire-Group_164),(((((Balansia_henningsiana,(Neotyphodium_coenophialum,Epichloe_amarillans),Atkinsonella_hypoxylon),Claviceps_purpurea),Cordyceps_capitata),Acremonium_chrysogenum,(Hypomyces_polyporinus,MyTree0001_Not_Metazoa-Group_3),MyTree0001_Not_Metazoa-Group_4),(NCBI_Entire-Group_167,NCBI_Entire-Group_169))),(MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_238)),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_0),NCBI_Entire-Group_156)))); TREE 'NCBI_Tree2035_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((NCBI_Entire-Group_178,(MyTree0001_Not_Metazoa-Group_1,NCBI_Entire-Group_173),(NCBI_Entire-Group_170,NCBI_Entire-Group_167,NCBI_Entire-Group_169)),((Atkinsonella_hypoxylon,Balansia_henningsiana,Claviceps_purpurea,Cordyceps_capitata,Epichloe_amarillans,Neotyphodium_coenophialum),(Acremonium_chrysogenum,Hypomyces_polyporinus,MyTree0001_Not_Metazoa-Group_3),MyTree0001_Not_Metazoa-Group_4)),NCBI_Entire-Group_164),(MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_238)),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_0),NCBI_Entire-Group_156)))); TREE 'Tree2036_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Chaoborus,(((Anopheles_quadrimaculatus,Anopheles_earlei),(Anopheles_gambiae,Anopheles_stephensi)),((((Aedes_atropalpus,Aedes_aegypti),(Sabethes_cyaneus,Toxorhynchites_rutilus)),Culex_tarsalis),Culiseta_impatiens))),NCBI_Entire-Group_093)))); TREE 'NCBI_Tree2036_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Chaoborus,(Toxorhynchites_rutilus,(Anopheles_earlei,Anopheles_gambiae,Anopheles_quadrimaculatus,Anopheles_stephensi),(Sabethes_cyaneus,(Aedes_aegypti,Aedes_atropalpus,Culex_tarsalis,Culiseta_impatiens)))),NCBI_Entire-Group_093)))); TREE 'Tree2162_Not_Archaea' = [&R] (Archaea,((NCBI_Entire-Group_300,NCBI_Entire-Group_331),((((((NCBI_Entire-Group_335,Scytonema),NCBI_Entire-Group_336),(Microcystis,Synechocystis),NCBI_Entire-Group_334),((Viridiplantae,NCBI_Entire-Group_293),NCBI_Entire-Group_002)),Prochlorococcus_marinus,NCBI_Entire-Group_337,NCBI_Entire-Group_338),Gloeobacter_violaceus),NCBI_Entire-Group_310)); TREE 'NCBI_Tree2162_Not_Archaea' = [&R] ((((Microcystis,Synechocystis,Gloeobacter_violaceus),(NCBI_Entire-Group_338,NCBI_Entire-Group_337),(NCBI_Entire-Group_336,Scytonema),NCBI_Entire-Group_335,Prochlorococcus_marinus,NCBI_Entire-Group_334),NCBI_Entire-Group_300,NCBI_Entire-Group_310,NCBI_Entire-Group_331),(Viridiplantae,NCBI_Entire-Group_293,NCBI_Entire-Group_002),Archaea); TREE 'Tree2169_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(NCBI_Entire-Group_088,(MyTree0001_Metazoa-Group_3,NCBI_Entire-Group_095))))); TREE 'NCBI_Tree2169_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(NCBI_Entire-Group_088,(MyTree0001_Metazoa-Group_3,NCBI_Entire-Group_095))))); TREE 'Tree2215_Archaea' = [&R] ((((MyTree0000-Desulfurococcus_amylolyticus,MyTree0000-Group_1),(NCBI_Entire-Group_298,NCBI_Entire-Group_295)),Bacteria),Eukaryota); TREE 'NCBI_Tree2215_Archaea' = [&R] (((MyTree0000-Desulfurococcus_amylolyticus,MyTree0000-Group_1),(NCBI_Entire-Group_298,NCBI_Entire-Group_295)),Bacteria,Eukaryota); TREE 'Tree2215_Bacteria' = [&R] ((Archaea,((((((NCBI_Entire-Group_318,NCBI_Entire-Group_331),(NCBI_Entire-Group_306,NCBI_Entire-Group_310)),((NCBI_Entire-Group_300,NCBI_Entire-Group_303),NCBI_Entire-Group_302)),NCBI_Entire-Group_301),((Helicobacter_pylori,NCBI_Entire-Group_322),NCBI_Entire-Group_339)),NCBI_Entire-Group_304)),Eukaryota); TREE 'NCBI_Tree2215_Bacteria' = [&R] (Eukaryota,((NCBI_Entire-Group_318,Helicobacter_pylori,NCBI_Entire-Group_322,NCBI_Entire-Group_331),(NCBI_Entire-Group_306,NCBI_Entire-Group_310),NCBI_Entire-Group_300,NCBI_Entire-Group_301,NCBI_Entire-Group_302,NCBI_Entire-Group_303,NCBI_Entire-Group_304,NCBI_Entire-Group_339),Archaea); TREE 'Tree2215_Eukaryota' = [&R] ((Archaea,Bacteria),((((((MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_7),((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),Viridiplantae)),(Prorocentrum_micans,MyTree0001_Not_Metazoa-Group_19)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum),(MyTree0001_Not_Metazoa-Entamoeba_histolytica,NCBI_Entire-Group_287)),MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi)); TREE 'NCBI_Tree2215_Eukaryota' = [&R] ((Viridiplantae,(Prorocentrum_micans,MyTree0001_Not_Metazoa-Group_19),(((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi),(MyTree0001_Metazoa-Group_15,MyTree0001_Metazoa-Group_7)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica,NCBI_Entire-Group_287),Bacteria,Archaea); TREE 'Tree2228_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(NCBI_Entire-Group_066,(((((((((((((Vulpes_vulpes,Canis_lupus,NCBI_Entire-Group_010),Equus_caballus),(((MyTree0001_Metazoa-Group_11,Bos_taurus),MyTree0001_Metazoa-Group_10),MyTree0001_Metazoa-Sus_scrofa)),((MyTree0001_Metazoa-Group_7,MyTree0001_Metazoa-Group_8),MyTree0001_Metazoa-Group_9)),MyTree0001_Metazoa-Cavia_porcellus),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_14)),Oryctolagus_cuniculus),((((MyTree0001_Metazoa-Group_5,Meleagris_gallopavo),NCBI_Entire-Group_050),Struthio_camelus),(Pelomedusa_subrufa,MyTree0001_Metazoa-Chelonia_mydas),MyTree0001_Metazoa-Alligator_mississippiensis)),MyTree0001_Metazoa-Group_15),NCBI_Entire-Group_040),MyTree0001_Metazoa-Latimeria_chalumnae),(((((Oreochromis_mossambicus,Takifugu_rubripes),Oryzias_latipes),(MyTree0001_Metazoa-Oncorhynchus_mykiss,Gadus_morhua)),(Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio)),Anguilla_anguilla)),MyTree0001_Metazoa-Group_4))))); TREE 'NCBI_Tree2228_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(NCBI_Entire-Group_066,(((Anguilla_anguilla,(((Gadus_morhua,(Oreochromis_mossambicus,Oryzias_latipes,Takifugu_rubripes)),MyTree0001_Metazoa-Oncorhynchus_mykiss),(Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio))),(((((((Struthio_camelus,(NCBI_Entire-Group_050,(Meleagris_gallopavo,MyTree0001_Metazoa-Group_5))),MyTree0001_Metazoa-Alligator_mississippiensis),NCBI_Entire-Group_040),(Pelomedusa_subrufa,MyTree0001_Metazoa-Chelonia_mydas)),(Equus_caballus,Oryctolagus_cuniculus,(MyTree0001_Metazoa-Group_10,(Bos_taurus,MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Sus_scrofa),((MyTree0001_Metazoa-Group_7,MyTree0001_Metazoa-Group_8),MyTree0001_Metazoa-Group_9),((Canis_lupus,Vulpes_vulpes),NCBI_Entire-Group_010),((MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Cavia_porcellus))),MyTree0001_Metazoa-Group_15),MyTree0001_Metazoa-Latimeria_chalumnae)),MyTree0001_Metazoa-Group_4))))); TREE 'Tree2232_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Trichoderma_aureoviride,Hypocrea_aureoviridis),(Hypocrea_sulphurea,Hypocrea_pulvinata),((Trichoderma_inhamatum,Trichoderma_aggressivum),Trichoderma_virens),Trichoderma_polysporum,(Hypocrea_patella,((Trichoderma_citrinoviride,Trichoderma_saturnisporum,(Trichoderma_parceramosum,Trichoderma_ghanense),MyTree0001_Not_Metazoa-Group_7),Trichoderma_longibrachiatum)),(Trichoderma_atroviride,(Trichoderma_viride,Trichoderma_hamatum),Trichoderma_asperellum,Trichoderma_strigosum,Hypocrea_neorufa),Hypocrea_lutea),(Hypomyces_dactylaroides,Hypomyces_aurantius))))); TREE 'NCBI_Tree2232_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Hypocrea_aureoviridis,Hypocrea_lutea,Hypocrea_neorufa,Hypocrea_patella,Hypocrea_pulvinata,Hypocrea_sulphurea,Hypomyces_aurantius,Hypomyces_dactylaroides,Trichoderma_aggressivum,Trichoderma_asperellum,Trichoderma_atroviride,Trichoderma_aureoviride,Trichoderma_citrinoviride,Trichoderma_ghanense,Trichoderma_hamatum,Trichoderma_inhamatum,Trichoderma_longibrachiatum,Trichoderma_parceramosum,Trichoderma_polysporum,Trichoderma_saturnisporum,Trichoderma_strigosum,Trichoderma_virens,Trichoderma_viride,MyTree0001_Not_Metazoa-Group_7)))); TREE 'Tree2234_Archaea' = [&R] (Eukaryota,(Bacteria,((((MyTree0000-Group_0,NCBI_Entire-Group_295),NCBI_Entire-Group_297),MyTree0000-Group_2),((Pyrodictium_occultum,MyTree0000-Group_1),NCBI_Entire-Group_294)))); TREE 'NCBI_Tree2234_Archaea' = [&R] (((Pyrodictium_occultum,MyTree0000-Group_1,NCBI_Entire-Group_294),(MyTree0000-Group_0,MyTree0000-Group_2,NCBI_Entire-Group_295,NCBI_Entire-Group_297)),Bacteria,Eukaryota); TREE 'Tree2234_Bacteria' = [&R] (Eukaryota,(((((NCBI_Entire-Group_336,NCBI_Entire-Group_338),NCBI_Entire-Group_339),(Chlorobium_tepidum,NCBI_Entire-Group_304),Helicobacter_pylori,(NCBI_Entire-Group_318,NCBI_Entire-Group_313,NCBI_Entire-Group_315),NCBI_Entire-Group_329,(Thermotoga_maritima,NCBI_Entire-Group_303),NCBI_Entire-Group_322),NCBI_Entire-Group_309),Archaea)); TREE 'NCBI_Tree2234_Bacteria' = [&R] (Eukaryota,(Chlorobium_tepidum,(NCBI_Entire-Group_336,NCBI_Entire-Group_338,NCBI_Entire-Group_339),(NCBI_Entire-Group_329,(NCBI_Entire-Group_318,NCBI_Entire-Group_313,NCBI_Entire-Group_315),Helicobacter_pylori,NCBI_Entire-Group_322),NCBI_Entire-Group_309,Thermotoga_maritima,NCBI_Entire-Group_304,NCBI_Entire-Group_303),Archaea); TREE 'Tree2259_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((NCBI_Entire-Group_212,NCBI_Entire-Group_195),NCBI_Entire-Group_235),(MyTree0001_Not_Metazoa-Group_2,MyTree0001_Not_Metazoa-Group_7,MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_173),(MyTree0001_Not_Metazoa-Coccidioides_immitis,NCBI_Entire-Group_237)),((Aspergillus_niger,Aspergillus_fumigatus,Aspergillus_flavus,Aspergillus_aculeatus),NCBI_Entire-Group_238)),Emericella_nidulans),((((((Saccharomyces_cerevisiae,Saccharomyces_kluyveri),Zygosaccharomyces_rouxii),Kluyveromyces_lactis),NCBI_Entire-Group_246),(Pichia_angusta,Pichia_pastoris)),Schizosaccharomyces_pombe),MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Group_8,MyTree0001_Not_Metazoa-Ustilago_maydis)))); TREE 'NCBI_Tree2259_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Schizosaccharomyces_pombe,(((MyTree0001_Not_Metazoa-Coccidioides_immitis,NCBI_Entire-Group_237),((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger,Emericella_nidulans),NCBI_Entire-Group_238)),(((MyTree0001_Not_Metazoa-Group_7,MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),(MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173)),NCBI_Entire-Group_212,NCBI_Entire-Group_195),NCBI_Entire-Group_235),((Kluyveromyces_lactis,Pichia_angusta,Pichia_pastoris,Saccharomyces_cerevisiae,Saccharomyces_kluyveri,Zygosaccharomyces_rouxii),NCBI_Entire-Group_246)),((MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Group_8),MyTree0001_Not_Metazoa-Ustilago_maydis))))); TREE 'Tree2260_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((Emericella_nidulans,(Aspergillus_niger,Aspergillus_fumigatus,Aspergillus_flavus,Aspergillus_aculeatus),NCBI_Entire-Group_238),(MyTree0001_Not_Metazoa-Coccidioides_immitis,NCBI_Entire-Group_237)),NCBI_Entire-Group_235),((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),(MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_182)),((Alternaria_alternata,Pleospora_herbarum),Cochliobolus_sativus),NCBI_Entire-Group_195),((((Saccharomyces_cerevisiae,Saccharomyces_kluyveri),Zygosaccharomyces_rouxii),Kluyveromyces_lactis),(Pichia_angusta,Pichia_anomala),NCBI_Entire-Group_246)),Schizosaccharomyces_pombe),(MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Group_8),MyTree0001_Not_Metazoa-Ustilago_maydis)))); TREE 'NCBI_Tree2260_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Schizosaccharomyces_pombe,(((MyTree0001_Not_Metazoa-Coccidioides_immitis,NCBI_Entire-Group_237),((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger,Emericella_nidulans),NCBI_Entire-Group_238)),(((MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_182),(MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173)),(Alternaria_alternata,Cochliobolus_sativus,Pleospora_herbarum),NCBI_Entire-Group_195),NCBI_Entire-Group_235),((Kluyveromyces_lactis,Pichia_angusta,Pichia_anomala,Saccharomyces_cerevisiae,Saccharomyces_kluyveri,Zygosaccharomyces_rouxii),NCBI_Entire-Group_246)),((MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Group_8),MyTree0001_Not_Metazoa-Ustilago_maydis))))); TREE 'Tree2311_Fungi' = [&R] (((((Endoptychum_depressum,(Agaricus_diminutivus,(Agaricus_subrutilescens,(Agaricus_campestris,(Agaricus_californicus,(((((((Lepiota_viriditincta,Leucoagaricus_sericifer),Leucoagaricus_serenus),((Leucoagaricus_purpureolilacinus,(Leucoagaricus_wychanskyi,Leucoagaricus_crystallifer)),((Leucoagaricus_marriagei,((Leucoagaricus_americanus,Leucoagaricus_meleagris),Allopsalliota_geesterani)),((Leucocoprinus_heinemannii,((Leucocoprinus_straminellus,Leucocoprinus_cretaceus),(Leucocoprinus_brebissonii,(Leucoagaricus_nympharum,Leucoagaricus_leucothites)))),(Leucoagaricus_croceovelutinus,Leucoagaricus_barssii))))),((Lepiota_brunneoincarnata,(Lepiota_rufipes,Lepiota_cristata)),((Macrolepiota_phaeodisca,(Macrolepiota_mastoidea,Macrolepiota_excoriata)),((Macrolepiota_fuliginosa,((Macrolepiota_procera,Macrolepiota_dolichaula),Macrolepiota_colombiana)),Macrolepiota_clelandii)))),(Macrolepiota_neomastoidea,(((Macrolepiota_rachodes,Macrolepiota_olivieri),Leucoagaricus_hortensis),((Chlorophyllum_molybdites,Macrolepiota_globosa),Endoptychum_agaricoides)))),Micropsalliota),(Agaricus_bitorquis,Agaricus_bisporus))))))),Agaricus_arvensis),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree2311_Fungi' = [&R] ((((Micropsalliota,Macrolepiota_rachodes,Macrolepiota_procera,Macrolepiota_phaeodisca,Macrolepiota_olivieri,Macrolepiota_neomastoidea,Macrolepiota_mastoidea,Macrolepiota_globosa,Macrolepiota_fuliginosa,Macrolepiota_excoriata,Macrolepiota_dolichaula,Macrolepiota_colombiana,Macrolepiota_clelandii,Leucocoprinus_straminellus,Leucocoprinus_heinemannii,Leucocoprinus_cretaceus,Leucocoprinus_brebissonii,Leucoagaricus_wychanskyi,Leucoagaricus_sericifer,Leucoagaricus_serenus,Leucoagaricus_purpureolilacinus,Leucoagaricus_nympharum,Leucoagaricus_meleagris,Leucoagaricus_marriagei,Leucoagaricus_leucothites,Leucoagaricus_hortensis,Leucoagaricus_crystallifer,Leucoagaricus_croceovelutinus,Leucoagaricus_barssii,Leucoagaricus_americanus,Lepiota_viriditincta,Lepiota_rufipes,Lepiota_cristata,Lepiota_brunneoincarnata,Endoptychum_depressum,Endoptychum_agaricoides,Chlorophyllum_molybdites,Allopsalliota_geesterani,Agaricus_subrutilescens,Agaricus_diminutivus,Agaricus_campestris,Agaricus_californicus,Agaricus_bitorquis,Agaricus_bisporus,Agaricus_arvensis),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2312_Fungi' = [&R] (((((Lepiota_brunneoincarnata,(Lepiota_rufipes,Lepiota_cristata)),((((Leucoagaricus_americanus,Leucoagaricus_meleagris),((Leucoagaricus_serenus,Leucocoprinus_cretaceus),(Leucoagaricus_barssii,((Leucoagaricus_nympharum,Leucoagaricus_leucothites),Leucoagaricus_croceovelutinus)))),(Macrolepiota_mastoidea,(Macrolepiota_clelandii,(Macrolepiota_colombiana,(Macrolepiota_dolichaula,Macrolepiota_procera))))),(((Macrolepiota_olivieri,Macrolepiota_rachodes),(Endoptychum_agaricoides,Chlorophyllum_molybdites,Leucoagaricus_hortensis)),(Allopsalliota_geesterani,(Micropsalliota,(Agaricus_californicus,Agaricus_bisporus,(Agaricus_campestris,(Agaricus_diminutivus,(Endoptychum_depressum,Agaricus_arvensis))))))))),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree2312_Fungi' = [&R] ((((Micropsalliota,Macrolepiota_rachodes,Macrolepiota_procera,Macrolepiota_olivieri,Macrolepiota_mastoidea,Macrolepiota_dolichaula,Macrolepiota_colombiana,Macrolepiota_clelandii,Leucocoprinus_cretaceus,Leucoagaricus_serenus,Leucoagaricus_nympharum,Leucoagaricus_meleagris,Leucoagaricus_leucothites,Leucoagaricus_hortensis,Leucoagaricus_croceovelutinus,Leucoagaricus_barssii,Leucoagaricus_americanus,Lepiota_rufipes,Lepiota_cristata,Lepiota_brunneoincarnata,Endoptychum_depressum,Endoptychum_agaricoides,Chlorophyllum_molybdites,Allopsalliota_geesterani,Agaricus_diminutivus,Agaricus_campestris,Agaricus_californicus,Agaricus_bisporus,Agaricus_arvensis),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2313_Fungi' = [&R] (((((Lepiota_brunneoincarnata,Lepiota_cristata),(Macrolepiota_mastoidea,(Macrolepiota_colombiana,(Macrolepiota_clelandii,((Leucoagaricus_barssii,((Leucoagaricus_nympharum,Leucoagaricus_leucothites),(Leucocoprinus_cretaceus,Leucoagaricus_croceovelutinus))),(Macrolepiota_dolichaula,Macrolepiota_procera),((Leucoagaricus_serenus,((Leucoagaricus_americanus,Leucoagaricus_meleagris),(Allopsalliota_geesterani,Micropsalliota))),(Leucoagaricus_hortensis,(Chlorophyllum_molybdites,((Macrolepiota_rachodes,(Lepiota_rufipes,Macrolepiota_olivieri)),(Endoptychum_agaricoides,(Agaricus_campestris,((Agaricus_californicus,Agaricus_bisporus),((Endoptychum_depressum,Agaricus_diminutivus),Agaricus_arvensis))))))))))))),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree2313_Fungi' = [&R] ((((Micropsalliota,Macrolepiota_rachodes,Macrolepiota_procera,Macrolepiota_olivieri,Macrolepiota_mastoidea,Macrolepiota_dolichaula,Macrolepiota_colombiana,Macrolepiota_clelandii,Leucocoprinus_cretaceus,Leucoagaricus_serenus,Leucoagaricus_nympharum,Leucoagaricus_meleagris,Leucoagaricus_leucothites,Leucoagaricus_hortensis,Leucoagaricus_croceovelutinus,Leucoagaricus_barssii,Leucoagaricus_americanus,Lepiota_rufipes,Lepiota_cristata,Lepiota_brunneoincarnata,Endoptychum_depressum,Endoptychum_agaricoides,Chlorophyllum_molybdites,Allopsalliota_geesterani,Agaricus_diminutivus,Agaricus_campestris,Agaricus_californicus,Agaricus_bisporus,Agaricus_arvensis),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2345_Bacteria' = [&R] (Archaea,Eukaryota,(((NCBI_Entire-Group_329,NCBI_Entire-Group_332),NCBI_Entire-Group_328),NCBI_Entire-Group_331)); TREE 'NCBI_Tree2345_Bacteria' = [&R] (Eukaryota,(NCBI_Entire-Group_331,NCBI_Entire-Group_329,NCBI_Entire-Group_328,NCBI_Entire-Group_332),Archaea); TREE 'Tree2351_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Auxarthron_zuffianum,(Malbranchea_filamentosa,Malbranchea_dendritica)),(Renispora_flavissima,Uncinocarpus_reesii)),(NCBI_Entire-Group_236,((Ajellomyces_capsulatus,Ajellomyces_dermatitidis),((Thermoascus_aurantiacus,Thermoascus_crustaceus),(Talaromyces_flavus,(((Eupenicillium_javanicum,(Penicillium_namyslowskii,(Eupenicillium_crustaceum,Penicillium_chrysogenum))),NCBI_Entire-Group_238),(Aspergillus_niger,(Aspergillus_fumigatus,(Aspergillus_flavus,Eurotium_rubrum)))))))),MyTree0001_Not_Metazoa-Coccidioides_immitis),NCBI_Entire-Group_241),MyTree0001_Not_Metazoa-Group_2)))); TREE 'NCBI_Tree2351_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((Ajellomyces_capsulatus,Ajellomyces_dermatitidis,Auxarthron_zuffianum,Malbranchea_dendritica,Malbranchea_filamentosa,Renispora_flavissima,Uncinocarpus_reesii),NCBI_Entire-Group_236,MyTree0001_Not_Metazoa-Coccidioides_immitis),((Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger,Eupenicillium_crustaceum,Eupenicillium_javanicum,Eurotium_rubrum,Penicillium_chrysogenum,Penicillium_namyslowskii,Talaromyces_flavus,Thermoascus_aurantiacus,Thermoascus_crustaceus),NCBI_Entire-Group_238)),MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_241)))); TREE 'Tree2377_Fungi' = [&R] ((((((Penicillium_implicatum,Penicillium_cyaneum),(((((((Penicillium_velutinum,Penicillium_melinii),Penicillium_corylophilum),Penicillium_citreonigrum),(Penicillium_restrictum,Penicillium_decumbens)),Penicillium_dimorphosporum,(Penicillium_vinaceum,Eupenicillium_parvum)),(Eupenicillium_cinnamopurpureum,((Penicillium_charlesii,Penicillium_fellutanum),((Penicillium_westlingii,Penicillium_citrinum),((Penicillium_miczynskii,Penicillium_waksmanii),Eupenicillium_shearii))),(((Penicillium_atrovenetum,Penicillium_canescens),Penicillium_crustosum,(Penicillium_kojigenum,Penicillium_soppii,Penicillium_olsonii),Penicillium_griseofulvum,Penicillium_chrysogenum,Penicillium_madriti,Penicillium_atramentosum),((((Eupenicillium_lapidosum,Penicillium_glabrum,Penicillium_spinulosum),Eupenicillium_pinetorum),Penicillium_lividum),(Penicillium_brocae,(((Penicillium_adametzioides,Penicillium_bilaiae),(Penicillium_herquei,Eupenicillium_hirayamae)),Penicillium_adametzii)))))),(Penicillium_oxalicum,(Penicillium_janthinellum,(Penicillium_rolfsii,Penicillium_simplicissimum),Eupenicillium_brefeldianum,Eupenicillium_levitum,(Penicillium_donkii,Eupenicillium_stolkiae))))),Talaromyces_helicus,Penicillium_aculeatum),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree2377_Fungi' = [&R] ((((Talaromyces_helicus,Penicillium_westlingii,Penicillium_waksmanii,Penicillium_vinaceum,Penicillium_velutinum,Penicillium_spinulosum,Penicillium_soppii,Penicillium_simplicissimum,Penicillium_rolfsii,Penicillium_restrictum,Penicillium_oxalicum,Penicillium_olsonii,Penicillium_miczynskii,Penicillium_melinii,Penicillium_madriti,Penicillium_lividum,Penicillium_kojigenum,Penicillium_janthinellum,Penicillium_implicatum,Penicillium_herquei,Penicillium_griseofulvum,Penicillium_glabrum,Penicillium_fellutanum,Penicillium_donkii,Penicillium_dimorphosporum,Penicillium_decumbens,Penicillium_cyaneum,Penicillium_crustosum,Penicillium_corylophilum,Penicillium_citrinum,Penicillium_citreonigrum,Penicillium_chrysogenum,Penicillium_charlesii,Penicillium_canescens,Penicillium_brocae,Penicillium_bilaiae,Penicillium_atrovenetum,Penicillium_atramentosum,Penicillium_adametzioides,Penicillium_adametzii,Penicillium_aculeatum,Eupenicillium_stolkiae,Eupenicillium_shearii,Eupenicillium_pinetorum,Eupenicillium_parvum,Eupenicillium_levitum,Eupenicillium_lapidosum,Eupenicillium_hirayamae,Eupenicillium_cinnamopurpureum,Eupenicillium_brefeldianum),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2378_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Pneumocystis_carinii,NCBI_Entire-Group_156,((((NCBI_Entire-Group_189,((NCBI_Entire-Group_195,NCBI_Entire-Group_186),NCBI_Entire-Group_165)),((NCBI_Entire-Group_163,(NCBI_Entire-Group_205,(((Alternaria_alternata,Alternaria_brassicae,Alternaria_brassicicola,Alternaria_carotiincultae,Alternaria_cheiranthi,Alternaria_dauci,Alternaria_infectoria,Alternaria_longissima,Alternaria_petroselini,Alternaria_radicina,Alternaria_raphani,Alternaria_selini),(NCBI_Entire-Group_207,Kirschsteiniothelia_elaterascus)),NCBI_Entire-Group_211))),(((((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_173),NCBI_Entire-Group_170),(((MyTree0001_Not_Metazoa-Group_3,MyTree0001_Not_Metazoa-Group_7,NCBI_Entire-Group_182),((Microascus_cirrosus,Microascus_trigonosporus),Pseudallescheria_boydii)),NCBI_Entire-Group_181)),((((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_238),MyTree0001_Not_Metazoa-Coccidioides_immitis),(((Capronia_coronata,Capronia_mansonii,Capronia_parasitica,Capronia_pilosella,Capronia_pulcherrima),(Exophiala_castellanii,Exophiala_dermatitidis,Exophiala_jeanselmei,Exophiala_spinifera)),(NCBI_Entire-Group_240,Coniosporium_perforans))),(NCBI_Entire-Group_234,(NCBI_Entire-Group_226,NCBI_Entire-Group_235)))))),(NCBI_Entire-Group_220,NCBI_Entire-Group_217)),((Zygosaccharomyces_bailii,Zygosaccharomyces_rouxii),(Debaryomyces_hansenii,Debaryomyces_occidentalis))))))); TREE 'NCBI_Tree2378_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Coniosporium_perforans,Pneumocystis_carinii,(((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_238),MyTree0001_Not_Metazoa-Coccidioides_immitis),((NCBI_Entire-Group_234,NCBI_Entire-Group_235),NCBI_Entire-Group_226),(NCBI_Entire-Group_220,NCBI_Entire-Group_217),((NCBI_Entire-Group_186,(NCBI_Entire-Group_189,NCBI_Entire-Group_195)),(((MyTree0001_Not_Metazoa-Group_3,MyTree0001_Not_Metazoa-Group_7,NCBI_Entire-Group_182),NCBI_Entire-Group_181),((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),(NCBI_Entire-Group_170,(Microascus_cirrosus,Microascus_trigonosporus,Pseudallescheria_boydii)))),(NCBI_Entire-Group_163,NCBI_Entire-Group_165),((NCBI_Entire-Group_207,NCBI_Entire-Group_205),(Alternaria_alternata,Alternaria_brassicae,Alternaria_brassicicola,Alternaria_carotiincultae,Alternaria_cheiranthi,Alternaria_dauci,Alternaria_infectoria,Alternaria_longissima,Alternaria_petroselini,Alternaria_radicina,Alternaria_raphani,Alternaria_selini,Kirschsteiniothelia_elaterascus),NCBI_Entire-Group_211)),((Capronia_coronata,Capronia_mansonii,Capronia_parasitica,Capronia_pilosella,Capronia_pulcherrima,Exophiala_castellanii,Exophiala_dermatitidis,Exophiala_jeanselmei,Exophiala_spinifera),NCBI_Entire-Group_240)),NCBI_Entire-Group_156,(Debaryomyces_hansenii,Debaryomyces_occidentalis,Zygosaccharomyces_bailii,Zygosaccharomyces_rouxii))))); TREE 'Tree2392_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Diaporthe_pustulata,Diaporthe_padi),(Diaporthe_decedens,(Diaporthe_medusaea,(Diaporthe_eres,Diaporthe_arctii)))),(Valsa_mali,((Valsa_germanica,Valsa_ambiens),(Valsa_ceratosperma,(Valsella_salicis,Leucostoma_niveum,Leucostoma_auerswaldii))))),(((NCBI_Entire-Group_177,NCBI_Entire-Group_174),((Cryphonectria_havanensis,Cryphonectria_cubensis),Cryptodiaporthe_corni)),(NCBI_Entire-Group_176,(Cryptosporella_hypodermia,(Discula_destructiva,((Gnomonia_setacea,Gnomonia_gnomon),Phragmoporthe_conformis),(Gnomoniella_fraxini,Cryptodiaporthe_aesculi,Plagiostoma_euphorbiae,Apiognomonia_errabunda)))))),Gaeumannomyces_graminis),Magnaporthe_grisea)))); TREE 'NCBI_Tree2392_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((NCBI_Entire-Group_177,NCBI_Entire-Group_176),(Apiognomonia_errabunda,Cryptodiaporthe_aesculi,Cryptosporella_hypodermia,Discula_destructiva,Gnomonia_gnomon,Gnomonia_setacea,Gnomoniella_fraxini,Phragmoporthe_conformis,Plagiostoma_euphorbiae),(Cryphonectria_cubensis,Cryphonectria_havanensis,Cryptodiaporthe_corni,Diaporthe_arctii,Diaporthe_decedens,Diaporthe_eres,Diaporthe_medusaea,Diaporthe_padi,Diaporthe_pustulata,Leucostoma_auerswaldii,Leucostoma_niveum,Valsa_ambiens,Valsa_ceratosperma,Valsa_germanica,Valsa_mali,Valsella_salicis),NCBI_Entire-Group_174),(Gaeumannomyces_graminis,Magnaporthe_grisea))))); TREE 'Tree2405_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_156),((NCBI_Entire-Group_128,MyTree0001_Not_Metazoa-Ustilago_maydis),((((MyTree0001_Not_Metazoa-Cryptococcus_neoformans,NCBI_Entire-Group_137),NCBI_Entire-Group_132),((NCBI_Entire-Group_135,NCBI_Entire-Group_139),NCBI_Entire-Group_133)),((Erythrobasidium_hasegawianum,Occultifur_externus),(NCBI_Entire-Group_122,((Nyssopsora_echinata,(Endocronartium_harknessii,Cronartium_ribicola)),((Kondoa_malvinella,NCBI_Entire-Group_127),((Sporobolomyces_roseus,(NCBI_Entire-Group_130,NCBI_Entire-Group_126)),NCBI_Entire-Group_131))),NCBI_Entire-Group_123),NCBI_Entire-Group_124))))))); TREE 'NCBI_Tree2405_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_156),(MyTree0001_Not_Metazoa-Ustilago_maydis,(((MyTree0001_Not_Metazoa-Cryptococcus_neoformans,NCBI_Entire-Group_137),((NCBI_Entire-Group_133,NCBI_Entire-Group_135),NCBI_Entire-Group_132)),NCBI_Entire-Group_139),(((NCBI_Entire-Group_131,NCBI_Entire-Group_130),(Erythrobasidium_hasegawianum,Sporobolomyces_roseus,Occultifur_externus),NCBI_Entire-Group_128),((Kondoa_malvinella,NCBI_Entire-Group_127),NCBI_Entire-Group_126),((Cronartium_ribicola,Endocronartium_harknessii,Nyssopsora_echinata),NCBI_Entire-Group_124),NCBI_Entire-Group_123),NCBI_Entire-Group_122))))); TREE 'Tree2485_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((((((NCBI_Entire-Group_182,NCBI_Entire-Group_184),NCBI_Entire-Group_180),NCBI_Entire-Group_169),(((NCBI_Entire-Group_170,NCBI_Entire-Group_178),MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_164)),(NCBI_Entire-Group_171,MyTree0001_Not_Metazoa-Group_6)),(NCBI_Entire-Group_158,(Laboulbeniopsis_termitarius,Pyxidiophora))),((((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_238),NCBI_Entire-Group_240),NCBI_Entire-Group_199),((NCBI_Entire-Group_220,NCBI_Entire-Group_221),NCBI_Entire-Group_235))),(((NCBI_Entire-Group_248,(NCBI_Entire-Group_251,NCBI_Entire-Group_252)),(NCBI_Entire-Group_253,NCBI_Entire-Group_254)),NCBI_Entire-Group_156)),NCBI_Entire-Group_246),NCBI_Entire-Group_247)))); TREE 'NCBI_Tree2485_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((NCBI_Entire-Group_253,NCBI_Entire-Group_254),((NCBI_Entire-Group_251,NCBI_Entire-Group_252),NCBI_Entire-Group_248),(((NCBI_Entire-Group_220,NCBI_Entire-Group_221),(((NCBI_Entire-Group_171,(NCBI_Entire-Group_170,NCBI_Entire-Group_169),MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_178),(NCBI_Entire-Group_180,NCBI_Entire-Group_182,NCBI_Entire-Group_184)),NCBI_Entire-Group_199,NCBI_Entire-Group_164),(Laboulbeniopsis_termitarius,(Pyxidiophora,NCBI_Entire-Group_158)),(NCBI_Entire-Group_238,MyTree0001_Not_Metazoa-Group_5),NCBI_Entire-Group_235,NCBI_Entire-Group_240),NCBI_Entire-Group_156,(NCBI_Entire-Group_246,NCBI_Entire-Group_247),MyTree0001_Not_Metazoa-Group_6))))); TREE 'Tree2499_Eukaryota' = [&R] (Archaea,Bacteria,(Monosiga_brevicollis,(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(((MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3),((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio),Suberites_ficus)),MyTree0001_Metazoa-Group_16))); TREE 'NCBI_Tree2499_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),((MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Suberites_ficus),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2500_Eukaryota' = [&R] (Archaea,Bacteria,(((((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),Monosiga_brevicollis),(Suberites_ficus,(MyTree0001_Metazoa-Group_6,(MyTree0001_Metazoa-Group_16,MyTree0001_Metazoa-Danio_rerio)))),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Group_3)); TREE 'NCBI_Tree2500_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),((MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Suberites_ficus),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2501_Eukaryota' = [&R] (Archaea,Bacteria,(Monosiga_brevicollis,(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(((MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio),Nematostella),MyTree0001_Metazoa-Group_16))); TREE 'NCBI_Tree2501_Eukaryota' = [&R] ((((MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Nematostella),(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2502_Eukaryota' = [&R] (Archaea,Bacteria,(((Nematostella,(((Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_10),Monosiga_brevicollis),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3))),(MyTree0001_Metazoa-Group_16,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_6)); TREE 'NCBI_Tree2502_Eukaryota' = [&R] ((((MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Nematostella),(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2503_Eukaryota' = [&R] (Archaea,Bacteria,(Monosiga_brevicollis,(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio),Mnemiopsis_leidyi,MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_16))); TREE 'NCBI_Tree2503_Eukaryota' = [&R] ((((MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2504_Eukaryota' = [&R] (Archaea,Bacteria,(((((((MyTree0001_Metazoa-Group_16,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_6),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3)),Monosiga_brevicollis),Mnemiopsis_leidyi),MyTree0001_Not_Metazoa-Group_10),Schizosaccharomyces_pombe)); TREE 'NCBI_Tree2504_Eukaryota' = [&R] ((((MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2505_Eukaryota' = [&R] (Archaea,Bacteria,(Monosiga_brevicollis,(NCBI_Entire-Group_112,(Suberites_ficus,NCBI_Entire-Group_118),(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3),(Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio),Mnemiopsis_leidyi,MyTree0001_Metazoa-Group_16,NCBI_Entire-Group_119))); TREE 'NCBI_Tree2505_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(((Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(NCBI_Entire-Group_112,((NCBI_Entire-Group_119,NCBI_Entire-Group_118),Suberites_ficus))),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2506_Eukaryota' = [&R] (Archaea,Bacteria,(((Suberites_ficus,NCBI_Entire-Group_118),((MyTree0001_Metazoa-Group_16,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_6),(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),Monosiga_brevicollis,Nematostella,NCBI_Entire-Group_112,(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3),NCBI_Entire-Group_106,NCBI_Entire-Group_119),Mnemiopsis_leidyi)); TREE 'NCBI_Tree2506_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(((Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(NCBI_Entire-Group_112,((NCBI_Entire-Group_119,NCBI_Entire-Group_118),Suberites_ficus))),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2507_Eukaryota' = [&R] (Archaea,Bacteria,(Monosiga_brevicollis,((Suberites_ficus,NCBI_Entire-Group_118),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3),(NCBI_Entire-Group_112,((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),NCBI_Entire-Group_110)),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio),Nematostella,Mnemiopsis_leidyi,MyTree0001_Metazoa-Group_16,NCBI_Entire-Group_106,NCBI_Entire-Group_119))); TREE 'NCBI_Tree2507_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(((Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(NCBI_Entire-Group_112,((NCBI_Entire-Group_119,NCBI_Entire-Group_118),Suberites_ficus),NCBI_Entire-Group_110)),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2508_Eukaryota' = [&R] (Archaea,Bacteria,(((NCBI_Entire-Group_112,((Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_10),NCBI_Entire-Group_110)),Mnemiopsis_leidyi,Nematostella,(Suberites_ficus,NCBI_Entire-Group_118),((MyTree0001_Metazoa-Group_16,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_6),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3),NCBI_Entire-Group_106,NCBI_Entire-Group_119),Monosiga_brevicollis)); TREE 'NCBI_Tree2508_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(((Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(NCBI_Entire-Group_112,((NCBI_Entire-Group_119,NCBI_Entire-Group_118),Suberites_ficus),NCBI_Entire-Group_110)),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2511_Eukaryota' = [&R] (Archaea,Bacteria,(NCBI_Entire-Group_112,(Nematostella,NCBI_Entire-Group_107),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio),((Suberites_ficus,NCBI_Entire-Group_118),NCBI_Entire-Group_110),(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_2),Monosiga_brevicollis,MyTree0001_Metazoa-Group_16,Mnemiopsis_leidyi,NCBI_Entire-Group_106,NCBI_Entire-Group_119)); TREE 'NCBI_Tree2511_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),((((Nematostella,NCBI_Entire-Group_107),NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(NCBI_Entire-Group_112,((NCBI_Entire-Group_119,NCBI_Entire-Group_118),Suberites_ficus),NCBI_Entire-Group_110)),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2512_Eukaryota' = [&R] (Archaea,Bacteria,(((MyTree0001_Metazoa-Group_2,(Nematostella,NCBI_Entire-Group_107),NCBI_Entire-Group_112,MyTree0001_Metazoa-Group_3,Monosiga_brevicollis,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio),(Suberites_ficus,NCBI_Entire-Group_118),MyTree0001_Metazoa-Group_16,Mnemiopsis_leidyi,NCBI_Entire-Group_106,NCBI_Entire-Group_110,NCBI_Entire-Group_119),MyTree0001_Not_Metazoa-Group_10),Schizosaccharomyces_pombe)); TREE 'NCBI_Tree2512_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),((((Nematostella,NCBI_Entire-Group_107),NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(NCBI_Entire-Group_112,((NCBI_Entire-Group_119,NCBI_Entire-Group_118),Suberites_ficus),NCBI_Entire-Group_110)),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2513_Eukaryota' = [&R] (Archaea,Bacteria,(((Suberites_ficus,NCBI_Entire-Group_118),(NCBI_Entire-Group_112,MyTree0001_Metazoa-Group_3),(MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),Nematostella,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_2,NCBI_Entire-Group_098,NCBI_Entire-Group_106,NCBI_Entire-Group_110),Monosiga_brevicollis)); TREE 'NCBI_Tree2513_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(((Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,((MyTree0001_Metazoa-Group_3,NCBI_Entire-Group_098),MyTree0001_Metazoa-Group_6))),(NCBI_Entire-Group_112,(Suberites_ficus,NCBI_Entire-Group_118),NCBI_Entire-Group_110)),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2514_Eukaryota' = [&R] (Archaea,Bacteria,(((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),MyTree0001_Metazoa-Group_6,Suberites_ficus,Nematostella,NCBI_Entire-Group_112,MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3,Monosiga_brevicollis,NCBI_Entire-Group_098,NCBI_Entire-Group_106,NCBI_Entire-Group_110),NCBI_Entire-Group_118)); TREE 'NCBI_Tree2514_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(((Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,((MyTree0001_Metazoa-Group_3,NCBI_Entire-Group_098),MyTree0001_Metazoa-Group_6))),(NCBI_Entire-Group_112,(Suberites_ficus,NCBI_Entire-Group_118),NCBI_Entire-Group_110)),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2515_Eukaryota' = [&R] (Archaea,Bacteria,(Monosiga_brevicollis,(NCBI_Entire-Group_112,(Mnemiopsis_leidyi,NCBI_Entire-Group_106),((MyTree0001_Metazoa-Group_16,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Ommastrephes_sloani),(Nematostella,MyTree0001_Metazoa-Group_6),(Suberites_ficus,NCBI_Entire-Group_118),((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),MyTree0001_Not_Metazoa-Group_6),MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_110,NCBI_Entire-Group_119,NCBI_Entire-Group_146))); TREE 'NCBI_Tree2515_Eukaryota' = [&R] ((((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_6),NCBI_Entire-Group_146),(((Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,(((MyTree0001_Metazoa-Ommastrephes_sloani,MyTree0001_Metazoa-Strongylocentrotus_purpuratus),MyTree0001_Metazoa-Group_3),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(NCBI_Entire-Group_112,((NCBI_Entire-Group_119,NCBI_Entire-Group_118),Suberites_ficus),NCBI_Entire-Group_110)),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2516_Eukaryota' = [&R] (Archaea,Bacteria,(((((MyTree0001_Metazoa-Group_16,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Ommastrephes_sloani),(((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),MyTree0001_Not_Metazoa-Group_6),NCBI_Entire-Group_146),MyTree0001_Metazoa-Group_2,Monosiga_brevicollis,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_3,NCBI_Entire-Group_112,Nematostella,Mnemiopsis_leidyi,MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_106,NCBI_Entire-Group_110,NCBI_Entire-Group_118),Suberites_ficus),NCBI_Entire-Group_119)); TREE 'NCBI_Tree2516_Eukaryota' = [&R] ((((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_6),NCBI_Entire-Group_146),(((Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,(((MyTree0001_Metazoa-Ommastrephes_sloani,MyTree0001_Metazoa-Strongylocentrotus_purpuratus),MyTree0001_Metazoa-Group_3),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(NCBI_Entire-Group_112,((NCBI_Entire-Group_119,NCBI_Entire-Group_118),Suberites_ficus),NCBI_Entire-Group_110)),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2517_Eukaryota' = [&R] (Archaea,Bacteria,(Monosiga_brevicollis,((Suberites_ficus,NCBI_Entire-Group_118),(((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_146),(NCBI_Entire-Group_112,NCBI_Entire-Group_110)),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio),((MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_106),Nematostella),(MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi,MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Ommastrephes_sloani,NCBI_Entire-Group_119))); TREE 'NCBI_Tree2517_Eukaryota' = [&R] ((((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_6),NCBI_Entire-Group_146),(((Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,(((MyTree0001_Metazoa-Ommastrephes_sloani,MyTree0001_Metazoa-Strongylocentrotus_purpuratus),MyTree0001_Metazoa-Group_3),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(NCBI_Entire-Group_112,((NCBI_Entire-Group_119,NCBI_Entire-Group_118),Suberites_ficus),NCBI_Entire-Group_110)),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2518_Eukaryota' = [&R] (Archaea,Bacteria,(((((Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_10),MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_146),(NCBI_Entire-Group_112,NCBI_Entire-Group_110)),MyTree0001_Metazoa-Group_6,Monosiga_brevicollis,MyTree0001_Metazoa-Group_3,(Suberites_ficus,NCBI_Entire-Group_118),MyTree0001_Metazoa-Group_2,Mnemiopsis_leidyi,MyTree0001_Metazoa-Group_16,Nematostella,MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Ommastrephes_sloani,MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_106),NCBI_Entire-Group_119)); TREE 'NCBI_Tree2518_Eukaryota' = [&R] ((((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_6),NCBI_Entire-Group_146),(((Nematostella,NCBI_Entire-Group_106),(MyTree0001_Metazoa-Group_2,(((MyTree0001_Metazoa-Ommastrephes_sloani,MyTree0001_Metazoa-Strongylocentrotus_purpuratus),MyTree0001_Metazoa-Group_3),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Danio_rerio)),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi),(NCBI_Entire-Group_112,((NCBI_Entire-Group_119,NCBI_Entire-Group_118),Suberites_ficus),NCBI_Entire-Group_110)),Monosiga_brevicollis),Bacteria,Archaea); TREE 'Tree2521_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((((Sordaria_fimicola,MyTree0001_Not_Metazoa-Group_1),NCBI_Entire-Group_166),(Ascolacicola_austriaca,NCBI_Entire-Group_170)),NCBI_Entire-Group_178),NCBI_Entire-Group_164),(((NCBI_Entire-Group_210,NCBI_Entire-Group_212),NCBI_Entire-Group_205),NCBI_Entire-Group_163)),((((Talaromyces_flavus,(Eurotium_herbariorum,(Aspergillus_niger,Aspergillus_fumigatus,Aspergillus_flavus,Aspergillus_aculeatus))),NCBI_Entire-Group_238),NCBI_Entire-Group_237),(NCBI_Entire-Group_239,((Ceramothyrium_linnaeae,(Exophiala_castellanii,(((Capronia_mansonii,Pullularia_prototropha),Ramichloridium_anceps),(Capronia_pilosella,MyTree0001_Not_Metazoa-Group_6)))),Glyphium_elatum)))),MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_156)))); TREE 'NCBI_Tree2521_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((Ceramothyrium_linnaeae,Glyphium_elatum,(Capronia_mansonii,Capronia_pilosella,Exophiala_castellanii,Pullularia_prototropha,Ramichloridium_anceps)),NCBI_Entire-Group_239),(((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger,Eurotium_herbariorum,Talaromyces_flavus),NCBI_Entire-Group_238),NCBI_Entire-Group_237),((NCBI_Entire-Group_178,(Ascolacicola_austriaca,Sordaria_fimicola,MyTree0001_Not_Metazoa-Group_1),NCBI_Entire-Group_166,NCBI_Entire-Group_170),(NCBI_Entire-Group_163,NCBI_Entire-Group_164),(NCBI_Entire-Group_205,NCBI_Entire-Group_210,NCBI_Entire-Group_212))),MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_156)))); TREE 'Tree2525_Eukaryota' = [&R] (Archaea,Bacteria,(((((Triticum_aestivum,Zea_mays),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),Oryza_sativa),(((NCBI_Entire-Group_121,NCBI_Entire-Group_253),(((((((((NCBI_Entire-Group_165,NCBI_Entire-Group_207),NCBI_Entire-Group_212),(((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger),Emericella_nidulans),MyTree0001_Not_Metazoa-Group_2)),(MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_184)),NCBI_Entire-Group_237),MyTree0001_Not_Metazoa-Group_6),((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),Schizosaccharomyces_pombe)),(((MyTree0001_Not_Metazoa-Group_9,NCBI_Entire-Group_140),MyTree0001_Not_Metazoa-Group_8),NCBI_Entire-Group_146)),((Basidiobolus_ranarum,(NCBI_Entire-Group_248,Furculomyces_boomerangus)),Conidiobolus_coronatus))),((MyTree0001_Metazoa-Group_1,MyTree0001_Metazoa-Onchocerca_volvulus),MyTree0001_Metazoa-Strongylocentrotus_purpuratus))),Giardia_lamblia)); TREE 'NCBI_Tree2525_Eukaryota' = [&R] ((((Zea_mays,Triticum_aestivum,Oryza_sativa),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),((((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),(((NCBI_Entire-Group_207,NCBI_Entire-Group_212),((MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_165),((Emericella_nidulans,Aspergillus_niger,Aspergillus_fumigatus,Aspergillus_flavus,Aspergillus_aculeatus),NCBI_Entire-Group_237)),Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_6),((NCBI_Entire-Group_248,Furculomyces_boomerangus),(Conidiobolus_coronatus,Basidiobolus_ranarum)),((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_146),MyTree0001_Not_Metazoa-Group_9,NCBI_Entire-Group_140),NCBI_Entire-Group_121,NCBI_Entire-Group_253),((MyTree0001_Metazoa-Group_1,MyTree0001_Metazoa-Strongylocentrotus_purpuratus),MyTree0001_Metazoa-Onchocerca_volvulus)),Giardia_lamblia),Bacteria,Archaea); TREE 'Tree2536_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((NCBI_Entire-Group_240,NCBI_Entire-Group_241),((((((((((Helminthosporium_solani,Helminthosporium_velutinum),Massarina_eburnea),Keissleriella_cladophila),((Curreya_pityophila,(NCBI_Entire-Group_208,NCBI_Entire-Group_213)),MyTree0001_Not_Metazoa-Group_6)),(Kirschsteiniothelia_elaterascus,NCBI_Entire-Group_197)),Massariosphaeria_phaeospora),((Leptosphaeria_maculans,((Leptosphaeria_microscopica,Leptosphaeria_doliolum),Cucurbitaria_berberidis)),((Pleospora_herbarum,Cochliobolus_sativus),Pyrenophora_trichostoma)),NCBI_Entire-Group_201),(Herpotrichia_juniperi,NCBI_Entire-Group_210)),((Lophiostoma_crenatum,Massarina_australiensis),Massarina_bipolaris)),(NCBI_Entire-Group_163,(Coccodinium_bartschii,NCBI_Entire-Group_199))),MyTree0001_Not_Metazoa-Group_2)))); TREE 'NCBI_Tree2536_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Coccodinium_bartschii,NCBI_Entire-Group_199),(((Cucurbitaria_berberidis,Curreya_pityophila),(Leptosphaeria_doliolum,Leptosphaeria_maculans,Leptosphaeria_microscopica),NCBI_Entire-Group_208),NCBI_Entire-Group_201,(Cochliobolus_sativus,Helminthosporium_solani,Helminthosporium_velutinum,Kirschsteiniothelia_elaterascus,Pleospora_herbarum,Pyrenophora_trichostoma),(Herpotrichia_juniperi,Keissleriella_cladophila,Lophiostoma_crenatum,Massarina_australiensis,Massarina_bipolaris,Massarina_eburnea,Massariosphaeria_phaeospora),NCBI_Entire-Group_210,NCBI_Entire-Group_213),NCBI_Entire-Group_197),NCBI_Entire-Group_163,MyTree0001_Not_Metazoa-Group_2),(NCBI_Entire-Group_240,NCBI_Entire-Group_241)),MyTree0001_Not_Metazoa-Group_6)))); TREE 'Tree2574_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((NCBI_Entire-Group_053,NCBI_Entire-Group_052),(((Caiman_yacare,Melanosuchus_niger),Paleosuchus_palpebrosus),Alligator_mississippiensis)),((Struthio_camelus,NCBI_Entire-Group_051),((Ortalis_cinereiceps,Anseranas_semipalmata),NCBI_Entire-Group_049)))))); TREE 'NCBI_Tree2574_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Alligator_mississippiensis,Caiman_yacare,Melanosuchus_niger,Paleosuchus_palpebrosus),NCBI_Entire-Group_053,NCBI_Entire-Group_052),((Struthio_camelus,NCBI_Entire-Group_051),(Anseranas_semipalmata,Ortalis_cinereiceps,NCBI_Entire-Group_049)))))); TREE 'Tree2585_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((MyTree0001_Not_Metazoa-Group_10,((MyTree0001_Not_Metazoa-Group_0,NCBI_Entire-Group_246),(NCBI_Entire-Group_156,(((Pyxidiophora,((((NCBI_Entire-Group_212,Subbaromyces_splendens),NCBI_Entire-Group_207),((NCBI_Entire-Group_171,MyTree0001_Not_Metazoa-Group_6),((((Xylaria_hypoxylon,Xylaria_curta),(Hypoxylon_atroroseum,Daldinia_concentrica)),(((Ophiostoma_ulmi,Ophiostoma_piliferum),(Cryphonectria_parasitica,(Leucostoma_persoonii,Diaporthe_phaseolorum))),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2))),(((NCBI_Entire-Group_169,NCBI_Entire-Group_179),NCBI_Entire-Group_167),((NCBI_Entire-Group_182,NCBI_Entire-Group_184),MyTree0001_Not_Metazoa-Group_4))))),(((Talaromyces_flavus,(Aspergillus_niger,Aspergillus_fumigatus,Aspergillus_flavus,Aspergillus_aculeatus)),NCBI_Entire-Group_237),NCBI_Entire-Group_241))),NCBI_Entire-Group_222),NCBI_Entire-Group_220)))),NCBI_Entire-Group_247)))); TREE 'NCBI_Tree2585_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Pyxidiophora,((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger,Talaromyces_flavus),NCBI_Entire-Group_237),(NCBI_Entire-Group_220,NCBI_Entire-Group_222),((((Cryphonectria_parasitica,Diaporthe_phaseolorum,Leucostoma_persoonii),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_171,((Ophiostoma_piliferum,Ophiostoma_ulmi,Subbaromyces_splendens),NCBI_Entire-Group_169,NCBI_Entire-Group_167)),(NCBI_Entire-Group_184,NCBI_Entire-Group_182,MyTree0001_Not_Metazoa-Group_4),NCBI_Entire-Group_179),(Daldinia_concentrica,Hypoxylon_atroroseum,Xylaria_curta,Xylaria_hypoxylon),(NCBI_Entire-Group_212,NCBI_Entire-Group_207)),NCBI_Entire-Group_241),NCBI_Entire-Group_156,(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_0,NCBI_Entire-Group_246,NCBI_Entire-Group_247),MyTree0001_Not_Metazoa-Group_6)))); TREE 'Tree2654_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((MyTree0001_Metazoa-Group_15,(((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_5)),((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),(Anguilla_anguilla,MyTree0001_Metazoa-Group_13))),((((MyTree0001_Metazoa-Group_2,((MyTree0001_Metazoa-Group_3,(Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095)),MyTree0001_Metazoa-Group_1)),MyTree0001_Metazoa-Ixodes_scapularis),((MyTree0001_Metazoa-Group_16,Terebratalia_transversa),NCBI_Entire-Group_102)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus)),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2654_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.01_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((MyTree0001_Metazoa-Group_5,MyTree0001_Metazoa-Group_6),((((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),((Anguilla_anguilla,MyTree0001_Metazoa-Group_13),Catostomus_commersoni)),MyTree0001_Metazoa-Danio_rerio))),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.01_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.02_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((MyTree0001_Metazoa-Group_5,MyTree0001_Metazoa-Group_6),((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_13),(((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),(Anguilla_anguilla,Catostomus_commersoni))))),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.02_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.03_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),(((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),(((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),((Anguilla_anguilla,MyTree0001_Metazoa-Group_13),Catostomus_commersoni)),MyTree0001_Metazoa-Danio_rerio))),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.03_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.04_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),(((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_13),((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),(Anguilla_anguilla,Catostomus_commersoni))))),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.04_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.05_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((MyTree0001_Metazoa-Group_5,MyTree0001_Metazoa-Group_6),((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_7),((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),((Anguilla_anguilla,MyTree0001_Metazoa-Group_13),Catostomus_commersoni))))),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.05_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.06_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((MyTree0001_Metazoa-Group_5,MyTree0001_Metazoa-Group_6),(((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_13),MyTree0001_Metazoa-Group_7),((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),(Anguilla_anguilla,Catostomus_commersoni))))),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.06_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.07_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),(((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_5),(((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),((Anguilla_anguilla,MyTree0001_Metazoa-Group_13),Catostomus_commersoni))),MyTree0001_Metazoa-Group_6)),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.07_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.08_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_13),MyTree0001_Metazoa-Group_5),(((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),(Anguilla_anguilla,Catostomus_commersoni))),MyTree0001_Metazoa-Group_6)),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.08_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.09_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_5),((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),((Anguilla_anguilla,MyTree0001_Metazoa-Group_13),Catostomus_commersoni))))),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.09_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.10_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),(((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_13),MyTree0001_Metazoa-Group_5),((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),(Anguilla_anguilla,Catostomus_commersoni))))),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.10_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.11_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((((MyTree0001_Metazoa-Group_5,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Danio_rerio),((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),((Anguilla_anguilla,MyTree0001_Metazoa-Group_13),Catostomus_commersoni))),MyTree0001_Metazoa-Group_6)),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.11_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.12_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((((MyTree0001_Metazoa-Group_5,MyTree0001_Metazoa-Group_7),(MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_15),(Anguilla_anguilla,Catostomus_commersoni))),MyTree0001_Metazoa-Group_6)),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.12_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.13_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((((((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15),((Anguilla_anguilla,MyTree0001_Metazoa-Group_13),Catostomus_commersoni)),MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_6)),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.13_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.14_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),(((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_13),((((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15),(Anguilla_anguilla,Catostomus_commersoni))),MyTree0001_Metazoa-Group_6)),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.14_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.15_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),((((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15),((Anguilla_anguilla,MyTree0001_Metazoa-Group_13),Catostomus_commersoni)),MyTree0001_Metazoa-Danio_rerio))),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.15_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.16_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_13),(((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15),(Anguilla_anguilla,Catostomus_commersoni))))),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.16_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.17_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),(((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_7),(((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15),((Anguilla_anguilla,MyTree0001_Metazoa-Group_13),Catostomus_commersoni))),MyTree0001_Metazoa-Group_6)),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.17_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2655.18_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Terebratalia_transversa,MyTree0001_Metazoa-Group_16),NCBI_Entire-Group_102),(((((Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),((((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Group_13),MyTree0001_Metazoa-Group_7),(((((MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15),(Anguilla_anguilla,Catostomus_commersoni))),MyTree0001_Metazoa-Group_6)),NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2655.18_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2656_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((MyTree0001_Metazoa-Group_15,((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_5)),((Anguilla_anguilla,MyTree0001_Metazoa-Group_13),(Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio))),(MyTree0001_Metazoa-Group_2,((MyTree0001_Metazoa-Group_3,(Chaoborus,Chironomus_tentans,Dilophus_febrilis,Psychoda_cinerea,Sabethes_cyaneus,Toxorhynchites_rutilus,MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_091,NCBI_Entire-Group_092,NCBI_Entire-Group_093,NCBI_Entire-Group_094,NCBI_Entire-Group_095)),MyTree0001_Metazoa-Group_1),(Terebratalia_transversa,MyTree0001_Metazoa-Group_16,NCBI_Entire-Group_102),MyTree0001_Metazoa-Ixodes_scapularis)),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_109)))); TREE 'NCBI_Tree2656_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_16,(((Anguilla_anguilla,((Catostomus_commersoni,MyTree0001_Metazoa-Danio_rerio),MyTree0001_Metazoa-Group_13)),((((MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Sus_scrofa),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Group_15)),(Terebratalia_transversa,(((MyTree0001_Metazoa-Group_3,((Dilophus_febrilis,(NCBI_Entire-Group_095,NCBI_Entire-Group_094)),((Chaoborus,(Toxorhynchites_rutilus,Sabethes_cyaneus,MyTree0001_Metazoa-Group_0)),(Chironomus_tentans,NCBI_Entire-Group_093)),(Psychoda_cinerea,NCBI_Entire-Group_092),NCBI_Entire-Group_091)),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Ixodes_scapularis),MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_102)),MyTree0001_Metazoa-Group_2),NCBI_Entire-Group_109)))); TREE 'Tree2677_Archaea' = [&R] ((((NCBI_Entire-Group_295,NCBI_Entire-Group_296),(MyTree0000-Group_0,MyTree0000-Group_2)),(((NCBI_Entire-Group_298,NCBI_Entire-Group_297),MyTree0000-Group_1),Aeropyrum_pernix)),(Bacteria,Eukaryota)); TREE 'NCBI_Tree2677_Archaea' = [&R] (Eukaryota,Bacteria,((NCBI_Entire-Group_298,MyTree0000-Group_0,MyTree0000-Group_2,NCBI_Entire-Group_295,NCBI_Entire-Group_296,NCBI_Entire-Group_297),(MyTree0000-Group_1,Aeropyrum_pernix))); TREE 'Tree2677_Bacteria' = [&R] (Archaea,(((((((((NCBI_Entire-Group_304,NCBI_Entire-Group_331),(NCBI_Entire-Group_306,NCBI_Entire-Group_310)),NCBI_Entire-Group_307),NCBI_Entire-Group_339),NCBI_Entire-Group_303),NCBI_Entire-Group_328),(NCBI_Entire-Group_320,NCBI_Entire-Group_300)),((((Helicobacter_pylori,NCBI_Entire-Group_326),NCBI_Entire-Group_302),NCBI_Entire-Group_301),NCBI_Entire-Group_321)),Eukaryota)); TREE 'NCBI_Tree2677_Bacteria' = [&R] (Eukaryota,(((NCBI_Entire-Group_328,NCBI_Entire-Group_331),NCBI_Entire-Group_326,(NCBI_Entire-Group_320,NCBI_Entire-Group_321),Helicobacter_pylori),((NCBI_Entire-Group_306,NCBI_Entire-Group_307),NCBI_Entire-Group_310),NCBI_Entire-Group_304,NCBI_Entire-Group_302,NCBI_Entire-Group_300,NCBI_Entire-Group_301,NCBI_Entire-Group_303,NCBI_Entire-Group_339),Archaea); TREE 'Tree2677_Eukaryota' = [&R] (Archaea,(Bacteria,(MyTree0001_Not_Metazoa-Group_10,(Schizosaccharomyces_pombe,((Viridiplantae,(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3)),MyTree0001_Not_Metazoa-Group_2))))); TREE 'NCBI_Tree2677_Eukaryota' = [&R] ((Viridiplantae,((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_2),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_3))),Bacteria,Archaea); TREE 'Tree2678_Archaea' = [&R] (Bacteria,Eukaryota,((((MyTree0000-Group_0,NCBI_Entire-Group_295),((Pyrococcus_abyssi,(Pyrococcus_furiosus,Pyrococcus_horikoshii)),(MyTree0000-Group_1,(Aeropyrum_pernix,NCBI_Entire-Group_294)))),NCBI_Entire-Group_299),NCBI_Entire-Group_298)); TREE 'NCBI_Tree2678_Archaea' = [&R] (((Aeropyrum_pernix,MyTree0000-Group_1,NCBI_Entire-Group_294),((Pyrococcus_horikoshii,Pyrococcus_abyssi,Pyrococcus_furiosus),MyTree0000-Group_0,NCBI_Entire-Group_295,NCBI_Entire-Group_298,NCBI_Entire-Group_299)),Bacteria,Eukaryota); TREE 'Tree2679_Archaea' = [&R] (Bacteria,Eukaryota,(((((((Pyrococcus_horikoshii,Pyrococcus_furiosus),Thermococcus_celer),(((MyTree0000-Group_0,NCBI_Entire-Group_295),NCBI_Entire-Group_298),NCBI_Entire-Group_296)),NCBI_Entire-Group_297),NCBI_Entire-Group_294),Aeropyrum_pernix),MyTree0000-Group_1,MyTree0000-Desulfurococcus_amylolyticus)); TREE 'NCBI_Tree2679_Archaea' = [&R] (Eukaryota,Bacteria,((NCBI_Entire-Group_298,MyTree0000-Group_0,(Pyrococcus_furiosus,Thermococcus_celer,Pyrococcus_horikoshii),NCBI_Entire-Group_295,NCBI_Entire-Group_296,NCBI_Entire-Group_297),(MyTree0000-Group_1,(Aeropyrum_pernix,MyTree0000-Desulfurococcus_amylolyticus),NCBI_Entire-Group_294))); TREE 'Tree2680_Eukaryota' = [&R] (Archaea,Bacteria,((NCBI_Entire-Group_002,NCBI_Entire-Group_006),((((((Malawimonas_jakobiformis,Trimastix_marina),(Guillardia_theta,MyTree0001_Not_Metazoa-Group_15)),(Euglena_gracilis,(Plaesiobystra,(Macropharyngomonas_halophila,NCBI_Entire-Group_286)))),NCBI_Entire-Group_000),Viridiplantae),(Cercomonas,(Chlorarachnion_reptans,NCBI_Entire-Group_004))),MyTree0001_Not_Metazoa-Toxoplasma_gondii)); TREE 'NCBI_Tree2680_Eukaryota' = [&R] (((Macropharyngomonas_halophila,Plaesiobystra,NCBI_Entire-Group_286),Viridiplantae,(MyTree0001_Not_Metazoa-Toxoplasma_gondii,NCBI_Entire-Group_006),(Euglena_gracilis,MyTree0001_Not_Metazoa-Group_15),Guillardia_theta,Malawimonas_jakobiformis,(Chlorarachnion_reptans,Cercomonas),Trimastix_marina,NCBI_Entire-Group_000,NCBI_Entire-Group_002,NCBI_Entire-Group_004),Bacteria,Archaea); TREE 'Tree2681_Eukaryota' = [&R] (Archaea,Bacteria,((((((Giardia_lamblia,MyTree0001_Not_Metazoa-Group_15),NCBI_Entire-Group_289),((Viridiplantae,(NCBI_Entire-Group_005,NCBI_Entire-Group_006)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum)),((Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_2),((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_11))),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_7)); TREE 'NCBI_Tree2681_Eukaryota' = [&R] ((Giardia_lamblia,Viridiplantae,(((MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_11,NCBI_Entire-Group_246),Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_2),(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_7))),(NCBI_Entire-Group_005,NCBI_Entire-Group_006),MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Group_15,NCBI_Entire-Group_289),Bacteria,Archaea); TREE 'Tree2683.1_Not_Archaea' = [&R] (Archaea,(((((MyTree0001_Metazoa-Group_7,MyTree0001_Metazoa-Sus_scrofa),(MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_12)),Echinococcus_granulosus),((NCBI_Entire-Group_306,(MyTree0001_Not_Metazoa-Daucus_carota,MyTree0001_Not_Metazoa-Group_13)),NCBI_Entire-Group_304),NCBI_Entire-Group_271),Giardia_lamblia,NCBI_Entire-Group_289)); TREE 'NCBI_Tree2683.1_Not_Archaea' = [&R] ((NCBI_Entire-Group_306,NCBI_Entire-Group_304),(Giardia_lamblia,(MyTree0001_Not_Metazoa-Group_13,(NCBI_Entire-Group_271,(MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_12),MyTree0001_Not_Metazoa-Daucus_carota)),(Echinococcus_granulosus,(MyTree0001_Metazoa-Group_7,MyTree0001_Metazoa-Sus_scrofa)),NCBI_Entire-Group_289),Archaea); TREE 'Tree2683.2_Not_Archaea' = [&R] (Archaea,(((((MyTree0001_Metazoa-Group_7,MyTree0001_Metazoa-Sus_scrofa),((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_12),Zea_mays)),Echinococcus_granulosus),((NCBI_Entire-Group_306,(MyTree0001_Not_Metazoa-Daucus_carota,Sorghum_bicolor)),NCBI_Entire-Group_304),NCBI_Entire-Group_271),Giardia_lamblia,NCBI_Entire-Group_289)); TREE 'NCBI_Tree2683.2_Not_Archaea' = [&R] ((NCBI_Entire-Group_306,NCBI_Entire-Group_304),(Giardia_lamblia,((Sorghum_bicolor,Zea_mays),(NCBI_Entire-Group_271,(MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_12),MyTree0001_Not_Metazoa-Daucus_carota)),(Echinococcus_granulosus,(MyTree0001_Metazoa-Group_7,MyTree0001_Metazoa-Sus_scrofa)),NCBI_Entire-Group_289),Archaea); TREE 'Tree2684.1_Eukaryota' = [&R] (Archaea,Bacteria,(Babesia_bovis,MyTree0001_Not_Metazoa-Group_16,((((MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15),(((Schizosaccharomyces_pombe,(((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),NCBI_Entire-Group_237),(MyTree0001_Not_Metazoa-Group_10,(MyTree0001_Not_Metazoa-Group_0,NCBI_Entire-Group_246)))),((MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Onchocerca_volvulus),((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_0),((MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_7),((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Oncorhynchus_mykiss),MyTree0001_Metazoa-Group_6))))),((((Ipomoea_nil,Zea_mays),((Triticum_aestivum,Oryza_sativa),MyTree0001_Not_Metazoa-Arabidopsis_thaliana)),(MyTree0001_Not_Metazoa-Entamoeba_histolytica,NCBI_Entire-Group_293)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum))),MyTree0001_Not_Metazoa-Group_19),(MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Group_18)))); TREE 'NCBI_Tree2684.1_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15),((Ipomoea_nil,MyTree0001_Not_Metazoa-Arabidopsis_thaliana),(Zea_mays,Triticum_aestivum,Oryza_sativa)),(((MyTree0001_Not_Metazoa-Group_16,Babesia_bovis),MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Group_18),MyTree0001_Not_Metazoa-Group_19),(((MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_0,NCBI_Entire-Group_246),((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),NCBI_Entire-Group_237),Schizosaccharomyces_pombe),(((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_0),(((MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_7),(MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Oncorhynchus_mykiss))),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Onchocerca_volvulus))),MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica,NCBI_Entire-Group_293),Bacteria,Archaea); TREE 'Tree2684.2_Eukaryota' = [&R] (Archaea,Bacteria,(Babesia_bovis,MyTree0001_Not_Metazoa-Group_16,((((MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15),(((Schizosaccharomyces_pombe,(((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),NCBI_Entire-Group_237),(MyTree0001_Not_Metazoa-Group_10,(MyTree0001_Not_Metazoa-Group_0,NCBI_Entire-Group_246)))),((MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Onchocerca_volvulus),((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_0),(((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Oncorhynchus_mykiss),(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7)),MyTree0001_Metazoa-Group_14)))),((((Ipomoea_nil,Zea_mays),((Triticum_aestivum,Oryza_sativa),MyTree0001_Not_Metazoa-Arabidopsis_thaliana)),(MyTree0001_Not_Metazoa-Entamoeba_histolytica,NCBI_Entire-Group_293)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum))),MyTree0001_Not_Metazoa-Group_19),(MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Group_18)))); TREE 'NCBI_Tree2684.2_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15),((Ipomoea_nil,MyTree0001_Not_Metazoa-Arabidopsis_thaliana),(Zea_mays,Triticum_aestivum,Oryza_sativa)),(((MyTree0001_Not_Metazoa-Group_16,Babesia_bovis),MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Group_18),MyTree0001_Not_Metazoa-Group_19),(((MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_0,NCBI_Entire-Group_246),((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),NCBI_Entire-Group_237),Schizosaccharomyces_pombe),(((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_0),(((MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_7),(MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Oncorhynchus_mykiss))),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Onchocerca_volvulus))),MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica,NCBI_Entire-Group_293),Bacteria,Archaea); TREE 'Tree2685_Bacteria' = [&R] (Archaea,(((((Leptospira_interrogans,NCBI_Entire-Group_302),NCBI_Entire-Group_301),((NCBI_Entire-Group_327,NCBI_Entire-Group_333),NCBI_Entire-Group_328)),((Caulobacter_crescentus,((NCBI_Entire-Group_322,NCBI_Entire-Group_323),NCBI_Entire-Group_319)),NCBI_Entire-Group_321)),Eukaryota)); TREE 'NCBI_Tree2685_Bacteria' = [&R] (Eukaryota,(((NCBI_Entire-Group_327,NCBI_Entire-Group_328,NCBI_Entire-Group_333),((NCBI_Entire-Group_322,NCBI_Entire-Group_323),NCBI_Entire-Group_321,Caulobacter_crescentus,NCBI_Entire-Group_319)),(Leptospira_interrogans,NCBI_Entire-Group_302),NCBI_Entire-Group_301),Archaea); TREE 'Tree2685_Eukaryota' = [&R] (Archaea,((((((Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_10),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_6)),MyTree0001_Not_Metazoa-Group_18),(Bacteria,Viridiplantae)),NCBI_Entire-Group_289),MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15)); TREE 'NCBI_Tree2685_Eukaryota' = [&R] (((MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15),Viridiplantae,((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_6)),MyTree0001_Not_Metazoa-Group_18,NCBI_Entire-Group_289),Bacteria,Archaea); TREE 'Tree2686_Eukaryota' = [&R] (Archaea,Bacteria,((((((Viridiplantae,((MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15),Giardia_lamblia)),((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),Schizosaccharomyces_pombe)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum),MyTree0001_Metazoa-Group_2),MyTree0001_Metazoa-Group_3),MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7)); TREE 'NCBI_Tree2686_Eukaryota' = [&R] ((Giardia_lamblia,Viridiplantae,(((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),Schizosaccharomyces_pombe),(MyTree0001_Metazoa-Group_2,(MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7)))),(MyTree0001_Not_Metazoa-Group_14,MyTree0001_Not_Metazoa-Group_15),MyTree0001_Not_Metazoa-Dictyostelium_discoideum),Bacteria,Archaea); TREE 'Tree2687_Eukaryota' = [&R] (Archaea,Bacteria,(((MyTree0001_Metazoa-Group_15,(((Blattella_germanica,NCBI_Entire-Group_089),((MyTree0001_Metazoa-Group_3,NCBI_Entire-Group_087),((((Saccharomyces_cerevisiae,Saccharomyces_kluyveri),Candida_utilis),(MyTree0001_Not_Metazoa-Group_5,MyTree0001_Not_Metazoa-Group_4)),NCBI_Entire-Group_252))),MyTree0001_Metazoa-Strongylocentrotus_purpuratus)),(MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6)),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_7)); TREE 'NCBI_Tree2687_Eukaryota' = [&R] (((((Saccharomyces_kluyveri,Saccharomyces_cerevisiae,Candida_utilis),(MyTree0001_Not_Metazoa-Group_5,MyTree0001_Not_Metazoa-Group_4)),NCBI_Entire-Group_252),((((NCBI_Entire-Group_089,MyTree0001_Metazoa-Group_3,NCBI_Entire-Group_087),Blattella_germanica),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),(((MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_15))),Bacteria,Archaea); TREE 'Tree2688_Eukaryota' = [&R] (Archaea,Bacteria,((Fungi,((((((MyTree0001_Not_Metazoa-Group_15,NCBI_Entire-Group_006),Euglena_gracilis),((((((((Giardia_lamblia,Spironucleus_barkhanus),Hexamita_inflata),NCBI_Entire-Group_286),NCBI_Entire-Group_289),NCBI_Entire-Group_003),NCBI_Entire-Group_285),(Entamoeba_histolytica,MyTree0001_Not_Metazoa-Group_19)),((MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Group_18),Dinenympha_exilis))),(MyTree0001_Not_Metazoa-Dictyostelium_discoideum,NCBI_Entire-Group_293)),(Viridiplantae,NCBI_Entire-Group_004)),NCBI_Entire-Group_002)),MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_7)); TREE 'NCBI_Tree2688_Eukaryota' = [&R] (((Giardia_lamblia,(Hexamita_inflata,Spironucleus_barkhanus)),(NCBI_Entire-Group_285,NCBI_Entire-Group_286),Entamoeba_histolytica,Viridiplantae,(Fungi,(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_7)),((MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Group_18),(MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_006)),(NCBI_Entire-Group_003,NCBI_Entire-Group_004),(Euglena_gracilis,MyTree0001_Not_Metazoa-Group_15),Dinenympha_exilis,MyTree0001_Not_Metazoa-Dictyostelium_discoideum,NCBI_Entire-Group_002,NCBI_Entire-Group_289,NCBI_Entire-Group_293),Bacteria,Archaea); TREE 'Tree2689_Bacteria' = [&R] (Archaea,((((Bradyrhizobium_japonicum,(Bartonella_bacilliformis,NCBI_Entire-Group_323)),(Caulobacter_crescentus,NCBI_Entire-Group_319)),(((NCBI_Entire-Group_302,NCBI_Entire-Group_304),NCBI_Entire-Group_301),(((NCBI_Entire-Group_318,NCBI_Entire-Group_331),NCBI_Entire-Group_327),NCBI_Entire-Group_314))),Eukaryota)); TREE 'NCBI_Tree2689_Bacteria' = [&R] (Eukaryota,(((NCBI_Entire-Group_327,NCBI_Entire-Group_331),((Bradyrhizobium_japonicum,Bartonella_bacilliformis,NCBI_Entire-Group_323),Caulobacter_crescentus,NCBI_Entire-Group_319),(NCBI_Entire-Group_318,NCBI_Entire-Group_314)),NCBI_Entire-Group_301,NCBI_Entire-Group_302,NCBI_Entire-Group_304),Archaea); TREE 'Tree2689_Eukaryota' = [&R] (Archaea,(Viridiplantae,((MyTree0001_Not_Metazoa-Group_17,(((MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_7),(Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_10)),(Bacteria,(Euglena_gracilis,MyTree0001_Not_Metazoa-Group_15)))),MyTree0001_Not_Metazoa-Dictyostelium_discoideum))); TREE 'NCBI_Tree2689_Eukaryota' = [&R] ((Viridiplantae,MyTree0001_Not_Metazoa-Group_17,(Euglena_gracilis,MyTree0001_Not_Metazoa-Group_15),((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe),(MyTree0001_Metazoa-Group_3,MyTree0001_Metazoa-Group_7)),MyTree0001_Not_Metazoa-Dictyostelium_discoideum),Bacteria,Archaea); TREE 'Tree2690_Archaea' = [&R] (Eukaryota,((NCBI_Entire-Group_296,NCBI_Entire-Group_297),Bacteria)); TREE 'NCBI_Tree2690_Archaea' = [&R] ((NCBI_Entire-Group_296,NCBI_Entire-Group_297),Bacteria,Eukaryota); TREE 'Tree2690_Bacteria' = [&R] (Eukaryota,(((NCBI_Entire-Group_325,((Staphylococcus_haemolyticus,Staphylococcus_epidermidis),Staphylococcus_aureus)),(Archaea,NCBI_Entire-Group_318)),NCBI_Entire-Group_324)); TREE 'NCBI_Tree2690_Bacteria' = [&R] (((Staphylococcus_haemolyticus,Staphylococcus_epidermidis,Staphylococcus_aureus),((NCBI_Entire-Group_325,NCBI_Entire-Group_324),NCBI_Entire-Group_318)),Eukaryota,Archaea); TREE 'Tree2692_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Daubentonia_madagascariensis,((((Cheirogaleus_medius,(Mirza_coquereli,((Microcebus_ravelobensis,(Microcebus_sambiranensis,(Microcebus_tavaratra,(Microcebus_rufus,(Microcebus_berthae,Microcebus_myoxinus))))),(Microcebus_griseorufus,Microcebus_murinus)))),NCBI_Entire-Group_028),NCBI_Entire-Group_029),(Varecia_variegata,(Eulemur_mongoz,(Hapalemur_griseus,Lemur_catta))))),(Otolemur_crassicaudatus,MyTree0001_Metazoa-Nycticebus_coucang)),(((Pongo_pygmaeus,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_8),MyTree0001_Metazoa-Group_9)),((Canis_lupus,NCBI_Entire-Group_010),((Bos_taurus,(MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa)),(Equus_caballus,NCBI_Entire-Group_023))),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'NCBI_Tree2692_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Bos_taurus,MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa),((Daubentonia_madagascariensis,Otolemur_crassicaudatus,(Cheirogaleus_medius,Microcebus_berthae,Microcebus_griseorufus,Microcebus_murinus,Microcebus_myoxinus,Microcebus_ravelobensis,Microcebus_rufus,Microcebus_sambiranensis,Microcebus_tavaratra,Mirza_coquereli),(Eulemur_mongoz,Hapalemur_griseus,Lemur_catta,Varecia_variegata),MyTree0001_Metazoa-Nycticebus_coucang,NCBI_Entire-Group_028,NCBI_Entire-Group_029),((Pongo_pygmaeus,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_8),MyTree0001_Metazoa-Group_9),(Canis_lupus,NCBI_Entire-Group_010),(Equus_caballus,NCBI_Entire-Group_023)),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'Tree2707_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((MyTree0001_Metazoa-Group_6,NCBI_Entire-Group_015),(NCBI_Entire-Group_020,NCBI_Entire-Group_019)),(Allactaga_sibirica,(Aplodontia_rufa,(NCBI_Entire-Group_013,NCBI_Entire-Group_014)))),NCBI_Entire-Group_018),NCBI_Entire-Group_017)))); TREE 'NCBI_Tree2707_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Allactaga_sibirica,Aplodontia_rufa,(NCBI_Entire-Group_020,NCBI_Entire-Group_019,NCBI_Entire-Group_017,MyTree0001_Metazoa-Group_6,NCBI_Entire-Group_015,NCBI_Entire-Group_018),(NCBI_Entire-Group_013,NCBI_Entire-Group_014))))); TREE 'Tree2738_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Neocosmospora_vasinfecta,(Gibberella_avenacea,Fusarium_oxysporum,Fusarium_sambucinum)),((Hypomyces_polyporinus,((MyTree0001_Not_Metazoa-Group_3,MyTree0001_Not_Metazoa-Group_7),Hypocrea_lutea)),Volutella_ciliata)),(Nectria_cinnabarina,((Cordyceps_brongniartii,(NCBI_Entire-Group_180,NCBI_Entire-Group_181)),(((Cordyceps_ophioglossoides,Tolypocladium_inflatum),Claviceps_africana),MyTree0001_Not_Metazoa-Group_6)))),(NCBI_Entire-Group_167,NCBI_Entire-Group_169)),((((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),(Ophiostoma_ulmi,(Ophiostoma_stenoceras,Sporothrix_schenckii))),((Endothia_gyrosa,Cryphonectria_parasitica,Cryphonectria_cubensis),(Diaporthe_phaseolorum,Leucostoma_persoonii))),NCBI_Entire-Group_164)),NCBI_Entire-Group_163,NCBI_Entire-Group_246)))); TREE 'NCBI_Tree2738_Fungi' = [&R] ((((((NCBI_Entire-Group_164,NCBI_Entire-Group_163),((((Sporothrix_schenckii,Ophiostoma_ulmi,Ophiostoma_stenoceras),NCBI_Entire-Group_167,NCBI_Entire-Group_169),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),(Endothia_gyrosa,Cryphonectria_cubensis,Diaporthe_phaseolorum,Leucostoma_persoonii,Cryphonectria_parasitica)),((Volutella_ciliata,Neocosmospora_vasinfecta,Gibberella_avenacea,Nectria_cinnabarina,Fusarium_oxysporum,Fusarium_sambucinum),((Hypomyces_polyporinus,Hypocrea_lutea,MyTree0001_Not_Metazoa-Group_3,MyTree0001_Not_Metazoa-Group_7),NCBI_Entire-Group_181),(Cordyceps_brongniartii,Claviceps_africana,Cordyceps_ophioglossoides,Tolypocladium_inflatum),NCBI_Entire-Group_180))),MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_246),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2763_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((Diaporthe_phaseolorum,(Valsa_ceratosperma,NCBI_Entire-Group_177)),(NCBI_Entire-Group_170,(MyTree0001_Not_Metazoa-Magnaporthe_grisea,Ceratosphaeria_lampadophora))),((((Plectosphaerella_cucumerina,NCBI_Entire-Group_167),Glomerella_cingulata),((NCBI_Entire-Group_180,NCBI_Entire-Group_182),NCBI_Entire-Group_169)),((Cephalotheca_sulfurea,Coniochaeta_ligniaria),((((Lasiosphaeria_ovina,Neurospora_crassa),Chaetomium_globosum),Farrowia_longicollea),((Ascovaginospora_stellipala,NCBI_Entire-Group_166),NCBI_Entire-Group_168))))),(((Diatrype_disciformis,NCBI_Entire-Group_164),NCBI_Entire-Group_215),Diamantinia_citrina)),NCBI_Entire-Group_241),NCBI_Entire-Group_205),NCBI_Entire-Group_199)))); TREE 'NCBI_Tree2763_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((NCBI_Entire-Group_199,NCBI_Entire-Group_205),((Ceratosphaeria_lampadophora,((Diaporthe_phaseolorum,Valsa_ceratosperma),NCBI_Entire-Group_177),(Cephalotheca_sulfurea,Coniochaeta_ligniaria,Neurospora_crassa,(Chaetomium_globosum,Farrowia_longicollea),(Ascovaginospora_stellipala,Lasiosphaeria_ovina)),(NCBI_Entire-Group_170,NCBI_Entire-Group_169,NCBI_Entire-Group_167,NCBI_Entire-Group_168),NCBI_Entire-Group_166),((Glomerella_cingulata,Plectosphaerella_cucumerina),NCBI_Entire-Group_180,NCBI_Entire-Group_182)),(Diamantinia_citrina,Diatrype_disciformis,NCBI_Entire-Group_164),MyTree0001_Not_Metazoa-Magnaporthe_grisea,NCBI_Entire-Group_215),NCBI_Entire-Group_241)))); TREE 'Tree2785_Fungi' = [&R] ((((Penicillium_chermesinum,Eupenicillium_cinnamopurpureum,((Eupenicillium_tropicum,(Penicillium_westlingii,(Penicillium_sartoryi,Penicillium_citrinum))),(Eupenicillium_anatolicum,((Penicillium_peoriense,Penicillium_sumatrense),Penicillium_paxilli,(Eupenicillium_shearii,(Penicillium_manginii,Penicillium_decaturense,(Penicillium_waksmanii,Penicillium_miczynskii))))))),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree2785_Fungi' = [&R] ((((Penicillium_westlingii,Penicillium_waksmanii,Penicillium_sumatrense,Penicillium_sartoryi,Penicillium_peoriense,Penicillium_paxilli,Penicillium_miczynskii,Penicillium_manginii,Penicillium_decaturense,Penicillium_citrinum,Penicillium_chermesinum,Eupenicillium_tropicum,Eupenicillium_shearii,Eupenicillium_cinnamopurpureum,Eupenicillium_anatolicum),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2796_Viridiplantae' = [&R] (Archaea,Bacteria,((Fungi,Metazoa),(Schizanthus_wisetonensis,(Nicotiana_tabacum,(NCBI_Entire-Group_262,(((Paulownia_tomentosa,Rehmannia_glutinosa),Scrophularia_canina),((Peltanthera_floribunda,(((NCBI_Entire-Group_265,NCBI_Entire-Group_266),NCBI_Entire-Group_264),(NCBI_Entire-Group_269,NCBI_Entire-Group_268),NCBI_Entire-Group_267)),NCBI_Entire-Group_263))))))); TREE 'NCBI_Tree2796_Viridiplantae' = [&R] (Archaea,Bacteria,(((Nicotiana_tabacum,Schizanthus_wisetonensis),(Paulownia_tomentosa,Peltanthera_floribunda,Rehmannia_glutinosa,Scrophularia_canina,NCBI_Entire-Group_263,NCBI_Entire-Group_262,((NCBI_Entire-Group_269,NCBI_Entire-Group_268,NCBI_Entire-Group_267),(NCBI_Entire-Group_266,NCBI_Entire-Group_265,NCBI_Entire-Group_264)))),(Fungi,Metazoa))); TREE 'Tree2798_Viridiplantae' = [&R] (Archaea,Bacteria,((Fungi,Metazoa),(Schizanthus_wisetonensis,(Nicotiana_tabacum,((NCBI_Entire-Group_262,(Peltanthera_floribunda,NCBI_Entire-Group_263,(((NCBI_Entire-Group_265,NCBI_Entire-Group_266),NCBI_Entire-Group_264),(NCBI_Entire-Group_269,NCBI_Entire-Group_268),NCBI_Entire-Group_267))),((Paulownia_tomentosa,Rehmannia_glutinosa),Scrophularia_canina)))))); TREE 'NCBI_Tree2798_Viridiplantae' = [&R] (Archaea,Bacteria,(((Nicotiana_tabacum,Schizanthus_wisetonensis),(Paulownia_tomentosa,Peltanthera_floribunda,Rehmannia_glutinosa,Scrophularia_canina,NCBI_Entire-Group_263,NCBI_Entire-Group_262,((NCBI_Entire-Group_269,NCBI_Entire-Group_268,NCBI_Entire-Group_267),(NCBI_Entire-Group_266,NCBI_Entire-Group_265,NCBI_Entire-Group_264)))),(Fungi,Metazoa))); TREE 'Tree2832_Fungi' = [&R] (((((Ustilago_vetiveriae,(Ustilago_trichophora,Ustilago_schroeteriana),(Ustilago_esculenta,Ustilago_echinata),(Sporisorium_veracruzianum,(Ustilago_affinis,Ustilago_crameri)),(((((Ustilago_sparsa,Ustilago_cynodontis),Ustilago_xerochloae),((Ustilago_nuda,Ustilago_hordei,Ustilago_avenae),(Ustilago_turcomanica,Ustilago_tritici,Ustilago_pamirica,Ustilago_bullata))),Sporisorium_aegypticum),(Ustilago_maydis,((Sporisorium_provinciale,Sporisorium_mishrae,(((Sporisorium_themedae-arguentis,Sporisorium_polliniae),Sporisorium_chrysopogonis),Sporisorium_catharticum,(Sporisorium_cenchri,((Sporisorium_panici-leucophaei,(Sporisorium_formosanum,Sporisorium_destruens)),Sorosporium_tumefaciens)))),(Sporisorium_scitamineum,((Sporisorium_cruentum,(Sporisorium_sorghi,Sporisorium_moniliferum)),((Sporisorium_occidentale,(Sporisorium_puellare,Sporisorium_trachypogonicola,Sporisorium_paspali-notati)),(Sporisorium_lepturi,Sporisorium_dimeriae-ornithopodae,(Sporisorium_pseudechinolaenae,(Sporisorium_reilianum,Sporisorium_fastigiatum))),(Sporisorium_holwayi,Sporisorium_culmiperdum)))))))),(Tolyposporium_junci,Farysia_chardoniana),Cintractia_axicola),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree2832_Fungi' = [&R] ((((Ustilago_xerochloae,Ustilago_vetiveriae,Ustilago_sparsa,Ustilago_schroeteriana,Ustilago_pamirica,Ustilago_echinata,Ustilago_crameri,Sporisorium_veracruzianum,Sporisorium_trachypogonicola,Sporisorium_themedae-arguentis,Sporisorium_puellare,Sporisorium_pseudechinolaenae,Sporisorium_provinciale,Sporisorium_polliniae,Sporisorium_panici-leucophaei,Sporisorium_occidentale,Sporisorium_mishrae,Sporisorium_paspali-notati,Sporisorium_lepturi,Sporisorium_formosanum,Sporisorium_fastigiatum,Sporisorium_dimeriae-ornithopodae,Sporisorium_chrysopogonis,Sporisorium_catharticum,Sporisorium_aegypticum,Sorosporium_tumefaciens,Ustilago_turcomanica,Ustilago_esculenta,Sporisorium_cenchri,Sporisorium_moniliferum,Sporisorium_holwayi,Sporisorium_cruentum,Ustilago_avenae,Ustilago_hordei,Ustilago_tritici,Ustilago_bullata,Ustilago_affinis,Sporisorium_culmiperdum,Ustilago_trichophora,Ustilago_nuda,Sporisorium_destruens,Sporisorium_reilianum,Farysia_chardoniana,Ustilago_cynodontis,Tolyposporium_junci,Sporisorium_sorghi,Cintractia_axicola,Sporisorium_scitamineum,Ustilago_maydis),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2833_Fungi' = [&R] (((((Antrodia_xantha,Diplomitoporus_lindbladii),(Phlebia_chrysocreas,((Phlebia_radiata,(Phanerochaete_chrysorhiza,Phanerochaete_rimosa)),((Bjerkandera_fumosa,Bjerkandera_adusta),(Leptoporus_mollis,Phanerochaete_allantospora),((Phlebia_albomellea,Phlebia_albida),(Phanerochaete_tuberculata,Phanerochaete_avellanea)),((Phlebia_concentrica,((Phanerochaete_velutina,((Phanerochaete_carnosa,Phanerochaete_sanguinea,Phanerochaete_burtii),Phanerochaete_arizonica),Phanerochaete_sordida),((Phanerochaete_subceracea,Phanerochaete_ericina),(Phlebia_subserialis,Phanerochaete_chrysosporium),(Phanerochaete_laevis,(Phanerochaete_australis,Phanerochaete_magnoliae))))),Phanerochaete_hiulca,(Phanerochaete_crassa,Phlebiopsis_gigantea),(Rhizochaete_filamentosa,Rhizochaete_radicata,(Rhizochaete_americana,(Rhizochaete_fouquieriae,Rhizochaete_brunnea)))))))),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree2833_Fungi' = [&R] (((((Rhizochaete_radicata,Rhizochaete_fouquieriae,Rhizochaete_filamentosa,Rhizochaete_brunnea,Rhizochaete_americana,Phanerochaete_velutina,Phanerochaete_tuberculata,Phanerochaete_subceracea,Phanerochaete_sordida,Phanerochaete_sanguinea,Phanerochaete_rimosa,Phanerochaete_magnoliae,Phanerochaete_laevis,Phanerochaete_hiulca,Phanerochaete_ericina,Phanerochaete_crassa,Phanerochaete_chrysosporium,Phanerochaete_chrysorhiza,Phanerochaete_carnosa,Phanerochaete_burtii,Phanerochaete_avellanea,Phanerochaete_australis,Phanerochaete_arizonica,Phanerochaete_allantospora,Leptoporus_mollis,Diplomitoporus_lindbladii,Bjerkandera_fumosa,Bjerkandera_adusta,Antrodia_xantha),(Phlebiopsis_gigantea,Phlebia_subserialis,Phlebia_radiata,Phlebia_concentrica,Phlebia_chrysocreas,Phlebia_albomellea,Phlebia_albida)),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2834_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Ceriporiopsis_subvermispora,(Ceriporia_purpurea,(Byssomerulius_albostramineus,Gloeoporus_taxicola))),(((Phanerochaete_chrysosporium,((Rhizochaete_filamentosa,Rhizochaete_radicata),(Rhizochaete_fouquieriae,(Rhizochaete_brunnea,Rhizochaete_americana)))),(Phlebiopsis_gigantea,Pulcherricium_caeruleum)),(((Irpex_lacteus,Bjerkandera_adusta),(Lopharia_spadicea,Oxyporus_latemarginatus)),(Ceriporiopsis_gilvescens,(Phlebia_tremellosa,(Phlebia_radiata,(Tyromyces_fumidiceps,Tyromyces_subgiganteus))))))),(Abortiporus_biennis,((Meripilus_giganteus,NCBI_Entire-Group_144),(Columnocystis_abietina,Tyromyces_chioneus))),NCBI_Entire-Group_151)))); TREE 'NCBI_Tree2834_Fungi' = [&R] ((((((Byssomerulius_albostramineus,(Rhizochaete_americana,Rhizochaete_fouquieriae,Rhizochaete_brunnea,Tyromyces_subgiganteus,Tyromyces_fumidiceps,Rhizochaete_radicata,Abortiporus_biennis,Rhizochaete_filamentosa,Ceriporiopsis_gilvescens,Tyromyces_chioneus,Oxyporus_latemarginatus,Ceriporiopsis_subvermispora,Meripilus_giganteus,Ceriporia_purpurea,Bjerkandera_adusta,Phanerochaete_chrysosporium),((Columnocystis_abietina,Lopharia_spadicea),(Phlebia_tremellosa,Phlebiopsis_gigantea,Gloeoporus_taxicola,Phlebia_radiata),Irpex_lacteus),Pulcherricium_caeruleum),NCBI_Entire-Group_151),NCBI_Entire-Group_144),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2835_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Columnocystis_abietina,(((Irpex_lacteus,(Bjerkandera_adusta,Lopharia_spadicea,Oxyporus_latemarginatus),((((Tyromyces_fumidiceps,Tyromyces_subgiganteus),Phlebia_radiata),Phlebia_tremellosa),Ceriporiopsis_gilvescens)),((Phlebiopsis_gigantea,Pulcherricium_caeruleum),(((Rhizochaete_brunnea,Rhizochaete_americana),Rhizochaete_fouquieriae),(Rhizochaete_filamentosa,Rhizochaete_radicata)),Phanerochaete_chrysosporium)),(((Byssomerulius_albostramineus,Gloeoporus_taxicola),Ceriporia_purpurea),Ceriporiopsis_subvermispora))),(((Abortiporus_biennis,Meripilus_giganteus),NCBI_Entire-Group_144),Tyromyces_chioneus)),NCBI_Entire-Group_151)))); TREE 'NCBI_Tree2835_Fungi' = [&R] ((((((Byssomerulius_albostramineus,(Rhizochaete_americana,Rhizochaete_fouquieriae,Rhizochaete_brunnea,Tyromyces_subgiganteus,Tyromyces_fumidiceps,Rhizochaete_radicata,Abortiporus_biennis,Rhizochaete_filamentosa,Ceriporiopsis_gilvescens,Tyromyces_chioneus,Oxyporus_latemarginatus,Ceriporiopsis_subvermispora,Meripilus_giganteus,Ceriporia_purpurea,Bjerkandera_adusta,Phanerochaete_chrysosporium),((Columnocystis_abietina,Lopharia_spadicea),(Phlebia_tremellosa,Phlebiopsis_gigantea,Gloeoporus_taxicola,Phlebia_radiata),Irpex_lacteus),Pulcherricium_caeruleum),NCBI_Entire-Group_151),NCBI_Entire-Group_144),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2837_Fungi' = [&R] (((((Antrodia_xantha,Diplomitoporus_lindbladii),(Phlebia_chrysocreas,((Phlebia_radiata,(Phanerochaete_chrysorhiza,Phanerochaete_rimosa)),((Bjerkandera_fumosa,Bjerkandera_adusta),((Leptoporus_mollis,Phanerochaete_allantospora),((Phlebia_albomellea,Phlebia_albida),(Phanerochaete_tuberculata,Phanerochaete_avellanea)),(Phanerochaete_hiulca,((Phlebia_concentrica,((Phanerochaete_velutina,(((Phanerochaete_carnosa,Phanerochaete_sanguinea),Phanerochaete_burtii),Phanerochaete_arizonica)),((Phanerochaete_subceracea,Phanerochaete_ericina),(Phlebia_subserialis,Phanerochaete_chrysosporium),(Phanerochaete_laevis,(Phanerochaete_sordida,Phanerochaete_australis,Phanerochaete_magnoliae))))),(Phanerochaete_crassa,Phlebiopsis_gigantea)),((Rhizochaete_filamentosa,Rhizochaete_radicata),(Rhizochaete_americana,(Rhizochaete_fouquieriae,Rhizochaete_brunnea))))))))),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree2837_Fungi' = [&R] (((((Rhizochaete_radicata,Rhizochaete_fouquieriae,Rhizochaete_filamentosa,Rhizochaete_brunnea,Rhizochaete_americana,Phanerochaete_velutina,Phanerochaete_tuberculata,Phanerochaete_subceracea,Phanerochaete_sordida,Phanerochaete_sanguinea,Phanerochaete_rimosa,Phanerochaete_magnoliae,Phanerochaete_laevis,Phanerochaete_hiulca,Phanerochaete_ericina,Phanerochaete_crassa,Phanerochaete_chrysosporium,Phanerochaete_chrysorhiza,Phanerochaete_carnosa,Phanerochaete_burtii,Phanerochaete_avellanea,Phanerochaete_australis,Phanerochaete_arizonica,Phanerochaete_allantospora,Leptoporus_mollis,Diplomitoporus_lindbladii,Bjerkandera_fumosa,Bjerkandera_adusta,Antrodia_xantha),(Phlebiopsis_gigantea,Phlebia_subserialis,Phlebia_radiata,Phlebia_concentrica,Phlebia_chrysocreas,Phlebia_albomellea,Phlebia_albida)),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2839.1_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Fomitopsis_pinicola,((Tyromyces_chioneus,Antrodia_carbonica),(((Meripilus_giganteus,Phanerochaete_sanguinea),NCBI_Entire-Group_144),((Abortiporus_biennis,(Phanerochaete_chrysorhiza,((Phlebia_subserialis,(Phlebia_tremellosa,(Phlebia_rufa,Phlebia_radiata))),Scopuloides_hydnoides))),NCBI_Entire-Group_147),((Phlebia_centrifuga,(Gloeoporus_taxicola,(Ceriporia_purpurea,(Ceriporiopsis_subvermispora,Phlebia_nitidula))),((Ceraceomyces_eludens,Ceraceomyces_microsporus),(Ceraceomyces_serpens,Phlebia_lilascens))),((Phlebia_deflectens,((Pulcherricium_caeruleum,Bjerkandera_adusta),(Phanerochaete_sordida,Phanerochaete_chrysosporium))),((Phlebiopsis_gigantea,(Rhizochaete_brunnea,Rhizochaete_fouquieriae)),Rhizochaete_filamentosa,Rhizochaete_radicata,Rhizochaete_americana)))))),NCBI_Entire-Group_151)))); TREE 'NCBI_Tree2839.1_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Pulcherricium_caeruleum,Scopuloides_hydnoides,(Ceraceomyces_eludens,Ceraceomyces_microsporus,Ceraceomyces_serpens,Gloeoporus_taxicola,Phlebia_centrifuga,Phlebia_deflectens,Phlebia_lilascens,Phlebia_nitidula,Phlebia_radiata,Phlebia_rufa,Phlebia_subserialis,Phlebia_tremellosa,Phlebiopsis_gigantea),(Abortiporus_biennis,Antrodia_carbonica,Bjerkandera_adusta,Ceriporia_purpurea,Ceriporiopsis_subvermispora,Fomitopsis_pinicola,Meripilus_giganteus,Phanerochaete_chrysorhiza,Phanerochaete_chrysosporium,Phanerochaete_sanguinea,Phanerochaete_sordida,Rhizochaete_americana,Rhizochaete_brunnea,Rhizochaete_filamentosa,Rhizochaete_fouquieriae,Rhizochaete_radicata,Tyromyces_chioneus)),NCBI_Entire-Group_147,NCBI_Entire-Group_151),NCBI_Entire-Group_144)))); TREE 'Tree2839.2_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Fomitopsis_pinicola,((Tyromyces_chioneus,Antrodia_carbonica),(((Meripilus_giganteus,Phanerochaete_sanguinea),NCBI_Entire-Group_144),((Abortiporus_biennis,(Phanerochaete_chrysorhiza,((Phlebia_subserialis,(Phlebia_tremellosa,(Phlebia_rufa,Phlebia_radiata))),Scopuloides_hydnoides))),NCBI_Entire-Group_147),((Phlebia_centrifuga,(Gloeoporus_taxicola,(Ceriporia_purpurea,(Ceriporiopsis_subvermispora,Phlebia_nitidula))),((Ceraceomyces_eludens,Ceraceomyces_microsporus),Ceraceomyces_serpens)),(((Phlebia_lilascens,Phlebia_deflectens),((Pulcherricium_caeruleum,Bjerkandera_adusta),(Phanerochaete_sordida,Phanerochaete_chrysosporium))),((Phlebiopsis_gigantea,(Rhizochaete_brunnea,Rhizochaete_fouquieriae)),Rhizochaete_filamentosa,Rhizochaete_radicata,Rhizochaete_americana)))))),NCBI_Entire-Group_151)))); TREE 'NCBI_Tree2839.2_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Pulcherricium_caeruleum,Scopuloides_hydnoides,(Ceraceomyces_eludens,Ceraceomyces_microsporus,Ceraceomyces_serpens,Gloeoporus_taxicola,Phlebia_centrifuga,Phlebia_deflectens,Phlebia_lilascens,Phlebia_nitidula,Phlebia_radiata,Phlebia_rufa,Phlebia_subserialis,Phlebia_tremellosa,Phlebiopsis_gigantea),(Abortiporus_biennis,Antrodia_carbonica,Bjerkandera_adusta,Ceriporia_purpurea,Ceriporiopsis_subvermispora,Fomitopsis_pinicola,Meripilus_giganteus,Phanerochaete_chrysorhiza,Phanerochaete_chrysosporium,Phanerochaete_sanguinea,Phanerochaete_sordida,Rhizochaete_americana,Rhizochaete_brunnea,Rhizochaete_filamentosa,Rhizochaete_fouquieriae,Rhizochaete_radicata,Tyromyces_chioneus)),NCBI_Entire-Group_147,NCBI_Entire-Group_151),NCBI_Entire-Group_144)))); TREE 'Tree2840.1_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Fomitopsis_pinicola,((Tyromyces_chioneus,Antrodia_carbonica),(((Abortiporus_biennis,(Phanerochaete_chrysorhiza,((Phlebia_subserialis,(Phlebia_tremellosa,(Phlebia_rufa,Phlebia_radiata))),Scopuloides_hydnoides))),NCBI_Entire-Group_147),(((Meripilus_giganteus,Phanerochaete_sanguinea),NCBI_Entire-Group_144),((Phlebia_centrifuga,((Gloeoporus_taxicola,(Ceriporia_purpurea,(Ceriporiopsis_subvermispora,Phlebia_nitidula))),((Ceraceomyces_eludens,Ceraceomyces_microsporus),(Ceraceomyces_serpens,Phlebia_lilascens)))),((Phlebia_deflectens,((Pulcherricium_caeruleum,Bjerkandera_adusta),(Phanerochaete_sordida,Phanerochaete_chrysosporium))),(((Phlebiopsis_gigantea,(Rhizochaete_brunnea,Rhizochaete_fouquieriae)),Rhizochaete_filamentosa),Rhizochaete_radicata,Rhizochaete_americana))))))),NCBI_Entire-Group_151)))); TREE 'NCBI_Tree2840.1_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Pulcherricium_caeruleum,Scopuloides_hydnoides,(Ceraceomyces_eludens,Ceraceomyces_microsporus,Ceraceomyces_serpens,Gloeoporus_taxicola,Phlebia_centrifuga,Phlebia_deflectens,Phlebia_lilascens,Phlebia_nitidula,Phlebia_radiata,Phlebia_rufa,Phlebia_subserialis,Phlebia_tremellosa,Phlebiopsis_gigantea),(Abortiporus_biennis,Antrodia_carbonica,Bjerkandera_adusta,Ceriporia_purpurea,Ceriporiopsis_subvermispora,Fomitopsis_pinicola,Meripilus_giganteus,Phanerochaete_chrysorhiza,Phanerochaete_chrysosporium,Phanerochaete_sanguinea,Phanerochaete_sordida,Rhizochaete_americana,Rhizochaete_brunnea,Rhizochaete_filamentosa,Rhizochaete_fouquieriae,Rhizochaete_radicata,Tyromyces_chioneus)),NCBI_Entire-Group_147,NCBI_Entire-Group_151),NCBI_Entire-Group_144)))); TREE 'Tree2840.2_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Fomitopsis_pinicola,((Tyromyces_chioneus,Antrodia_carbonica),(((Abortiporus_biennis,(Phanerochaete_chrysorhiza,((Phlebia_subserialis,(Phlebia_tremellosa,(Phlebia_rufa,Phlebia_radiata))),Scopuloides_hydnoides))),NCBI_Entire-Group_147),(((Meripilus_giganteus,Phanerochaete_sanguinea),NCBI_Entire-Group_144),((Phlebia_centrifuga,((Gloeoporus_taxicola,(Ceriporia_purpurea,(Ceriporiopsis_subvermispora,Phlebia_nitidula))),((Ceraceomyces_eludens,Ceraceomyces_microsporus),Ceraceomyces_serpens))),(((Phlebia_lilascens,Phlebia_deflectens),((Pulcherricium_caeruleum,Bjerkandera_adusta),(Phanerochaete_sordida,Phanerochaete_chrysosporium))),(((Phlebiopsis_gigantea,(Rhizochaete_brunnea,Rhizochaete_fouquieriae)),Rhizochaete_filamentosa),Rhizochaete_radicata,Rhizochaete_americana))))))),NCBI_Entire-Group_151)))); TREE 'NCBI_Tree2840.2_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Pulcherricium_caeruleum,Scopuloides_hydnoides,(Ceraceomyces_eludens,Ceraceomyces_microsporus,Ceraceomyces_serpens,Gloeoporus_taxicola,Phlebia_centrifuga,Phlebia_deflectens,Phlebia_lilascens,Phlebia_nitidula,Phlebia_radiata,Phlebia_rufa,Phlebia_subserialis,Phlebia_tremellosa,Phlebiopsis_gigantea),(Abortiporus_biennis,Antrodia_carbonica,Bjerkandera_adusta,Ceriporia_purpurea,Ceriporiopsis_subvermispora,Fomitopsis_pinicola,Meripilus_giganteus,Phanerochaete_chrysorhiza,Phanerochaete_chrysosporium,Phanerochaete_sanguinea,Phanerochaete_sordida,Rhizochaete_americana,Rhizochaete_brunnea,Rhizochaete_filamentosa,Rhizochaete_fouquieriae,Rhizochaete_radicata,Tyromyces_chioneus)),NCBI_Entire-Group_147,NCBI_Entire-Group_151),NCBI_Entire-Group_144)))); TREE 'Tree2852_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((Saccharomyces_kluyveri,Saccharomyces_cerevisiae),Zygosaccharomyces_bailii),MyTree0001_Not_Metazoa-Group_0),((((((Talaromyces_emersonii,((Emericella_nidulans,Eurotium_herbariorum),Eupenicillium_javanicum)),(Coniosporium_perforans,(Exophiala_jeanselmei,(Capronia_mansonii,Capronia_pilosella)))),((NCBI_Entire-Group_232,NCBI_Entire-Group_234),NCBI_Entire-Group_233)),((((((Cochliobolus_sativus,Setosphaeria_rostrata),Pleospora_betae),(Leptosphaeria_maculans,NCBI_Entire-Group_213)),Mycosphaerella_mycopappi),NCBI_Entire-Group_205),(Coccodinium_bartschii,NCBI_Entire-Group_199))),((((((MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),NCBI_Entire-Group_169),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2)),(NCBI_Entire-Group_161,NCBI_Entire-Group_164)),((NCBI_Entire-Group_186,NCBI_Entire-Group_195),NCBI_Entire-Group_189))),(NCBI_Entire-Group_217,NCBI_Entire-Group_222)),(((Pneumocystis_carinii,Schizosaccharomyces_pombe),NCBI_Entire-Group_156),(Neolecta_vitellina,Neolecta_irregularis)))))); TREE 'NCBI_Tree2852_Fungi' = [&R] (((((((NCBI_Entire-Group_161,NCBI_Entire-Group_164),(((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_169),(MyTree0001_Not_Metazoa-Group_4,MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_182)),((NCBI_Entire-Group_189,NCBI_Entire-Group_195),NCBI_Entire-Group_186),((Coccodinium_bartschii,NCBI_Entire-Group_199),(((Mycosphaerella_mycopappi,Leptosphaeria_maculans),NCBI_Entire-Group_205),(Pleospora_betae,Setosphaeria_rostrata,Cochliobolus_sativus),NCBI_Entire-Group_213))),(NCBI_Entire-Group_217,NCBI_Entire-Group_222),(NCBI_Entire-Group_232,NCBI_Entire-Group_233,NCBI_Entire-Group_234),(Emericella_nidulans,Talaromyces_emersonii,Eurotium_herbariorum,Eupenicillium_javanicum),(Capronia_pilosella,Capronia_mansonii,Exophiala_jeanselmei)),Coniosporium_perforans,Neolecta_irregularis,Neolecta_vitellina,Schizosaccharomyces_pombe,((Zygosaccharomyces_bailii,Saccharomyces_kluyveri,Saccharomyces_cerevisiae),MyTree0001_Not_Metazoa-Group_0),Pneumocystis_carinii,NCBI_Entire-Group_156),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree2858_Metazoa' = [&R] ((((((((((Apomys_musculus,Apomys_microdon),(Apomys_insignis,Apomys_hylocoetes)),(Apomys_gracilostris,Apomys_datae)),Rhynchomys_isarogensis),Chrotomys_gonzalesi),Archboldomys_luzonensis),Batomys_granti),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree2858_Metazoa' = [&R] ((((Rhynchomys_isarogensis,Chrotomys_gonzalesi,Batomys_granti,Archboldomys_luzonensis,Apomys_musculus,Apomys_microdon,Apomys_insignis,Apomys_hylocoetes,Apomys_gracilostris,Apomys_datae),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'Tree2872.1_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Diplomitoporus_lindbladii,Ceriporiopsis_rivulosa),(((((Bjerkandera_fumosa,Bjerkandera_adusta),(NCBI_Entire-Group_151,((Antrodiella_semisupina,Antrodiella_onychoides),Phanerochaete_flava))),(Phanerochaete_allantospora,Leptoporus_mollis)),(((((Phlebia_albomellea,Phlebia_albida),Ceriporiopsis_aneirina),Irpex_lacteus),(Phanerochaete_tuberculata,Phanerochaete_avellanea)),((Tyromyces_alborubescens,Phlebia_chrysocreas),((Phanerochaete_chrysosporium,Phanerochaete_rimosa),Ceriporiopsis_gilvescens))),Ceriporiopsis_pannocincta),(((((Phanerochaete_ericina,Phanerochaete_subceracea),((Phanerochaete_carnosa,Phanerochaete_burtii),((Phanerochaete_sanguinea,Phanerochaete_sordida),Phanerochaete_velutina),((Phlebia_subserialis,Phanerochaete_chrysorhiza),Phanerochaete_arizonica)),((Phanerochaete_australis,Phanerochaete_magnoliae),Phanerochaete_laevis)),Phlebia_concentrica),Phanerochaete_crassa),(Rhizochaete_radicata,Rhizochaete_filamentosa),Phanerochaete_hiulca),Phlebia_radiata)),Antrodia_xantha)))); TREE 'NCBI_Tree2872.1_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Irpex_lacteus,(Phlebia_radiata,Phlebia_albida,Phlebia_subserialis,Phlebia_albomellea,Phlebia_chrysocreas,Phlebia_concentrica)),(Phanerochaete_chrysosporium,Bjerkandera_adusta,Phanerochaete_sordida,Ceriporiopsis_rivulosa,Leptoporus_mollis,Bjerkandera_fumosa,Antrodiella_onychoides,Antrodiella_semisupina,Antrodia_xantha,Diplomitoporus_lindbladii,Ceriporiopsis_gilvescens,Phanerochaete_chrysorhiza,Tyromyces_alborubescens,Rhizochaete_filamentosa,Phanerochaete_sanguinea,Phanerochaete_avellanea,Phanerochaete_magnoliae,Phanerochaete_velutina,Ceriporiopsis_aneirina,Ceriporiopsis_pannocincta,Rhizochaete_radicata,Phanerochaete_crassa,Phanerochaete_hiulca,Phanerochaete_ericina,Phanerochaete_subceracea,Phanerochaete_laevis,Phanerochaete_rimosa,Phanerochaete_arizonica,Phanerochaete_burtii,Phanerochaete_carnosa,Phanerochaete_tuberculata,Phanerochaete_allantospora,Phanerochaete_flava,Phanerochaete_australis)),NCBI_Entire-Group_151)))); TREE 'Tree2872.2_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Diplomitoporus_lindbladii,Ceriporiopsis_rivulosa),(((((Bjerkandera_fumosa,Bjerkandera_adusta),(NCBI_Entire-Group_151,((Antrodiella_semisupina,Antrodiella_onychoides),Phanerochaete_flava))),(Phanerochaete_allantospora,Leptoporus_mollis)),(((((Phlebia_albomellea,Phlebia_albida),Ceriporiopsis_aneirina),Irpex_lacteus),(Phanerochaete_tuberculata,Phanerochaete_avellanea)),((Tyromyces_alborubescens,Phlebia_chrysocreas),((Phanerochaete_chrysosporium,Phanerochaete_rimosa),Ceriporiopsis_gilvescens))),Ceriporiopsis_pannocincta),(((((Phanerochaete_ericina,Phanerochaete_subceracea),((Phanerochaete_carnosa,Phanerochaete_burtii),((Phanerochaete_sanguinea,Phanerochaete_sordida),Phanerochaete_velutina),((Phlebia_subserialis,Phanerochaete_chrysorhiza),Phanerochaete_arizonica),Phanerochaete_laevis),(Phanerochaete_australis,Phanerochaete_magnoliae)),Phlebia_concentrica),Phanerochaete_crassa),(Rhizochaete_radicata,Rhizochaete_filamentosa),Phanerochaete_hiulca),Phlebia_radiata)),Antrodia_xantha)))); TREE 'NCBI_Tree2872.2_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Irpex_lacteus,(Phlebia_radiata,Phlebia_albida,Phlebia_subserialis,Phlebia_albomellea,Phlebia_chrysocreas,Phlebia_concentrica)),(Phanerochaete_chrysosporium,Bjerkandera_adusta,Phanerochaete_sordida,Ceriporiopsis_rivulosa,Leptoporus_mollis,Bjerkandera_fumosa,Antrodiella_onychoides,Antrodiella_semisupina,Antrodia_xantha,Diplomitoporus_lindbladii,Ceriporiopsis_gilvescens,Phanerochaete_chrysorhiza,Tyromyces_alborubescens,Rhizochaete_filamentosa,Phanerochaete_sanguinea,Phanerochaete_avellanea,Phanerochaete_magnoliae,Phanerochaete_velutina,Ceriporiopsis_aneirina,Ceriporiopsis_pannocincta,Rhizochaete_radicata,Phanerochaete_crassa,Phanerochaete_hiulca,Phanerochaete_ericina,Phanerochaete_subceracea,Phanerochaete_laevis,Phanerochaete_rimosa,Phanerochaete_arizonica,Phanerochaete_burtii,Phanerochaete_carnosa,Phanerochaete_tuberculata,Phanerochaete_allantospora,Phanerochaete_flava,Phanerochaete_australis)),NCBI_Entire-Group_151)))); TREE 'Tree2931_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((NCBI_Entire-Group_134,(NCBI_Entire-Group_135,NCBI_Entire-Group_133)),NCBI_Entire-Group_136)))); TREE 'NCBI_Tree2931_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(NCBI_Entire-Group_136,NCBI_Entire-Group_135,NCBI_Entire-Group_134,NCBI_Entire-Group_133)))); TREE 'Tree2946_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_156),((Peziza_quelepidotia,(Peziza_badia,Cazia_flexiascus)),((Smardaea_amethystina,((Aleuria_aurantia,(Wilcoxina_rehmii,Wilcoxina_mikolae)),(Otidea_onotica,Otidea_concinna))),(Rhizina_undulata,((Morchella_esculenta,(((Leucangium_carthusianum,Fischerula_subcaulis),(Verpa_conica,Disciotis_venosa)),NCBI_Entire-Group_217)),(Underwoodia_columnaris,(((Wynnella_silvicola,Helvella_lacunosa),(Barssia_oregonensis,Balsamia_magnata)),NCBI_Entire-Group_218)))))))))); TREE 'NCBI_Tree2946_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Peziza_badia,Peziza_quelepidotia,Cazia_flexiascus),(Morchella_esculenta,Disciotis_venosa,Verpa_conica),(Fischerula_subcaulis,Leucangium_carthusianum,Helvella_lacunosa,Wynnella_silvicola,Balsamia_magnata,Barssia_oregonensis,Underwoodia_columnaris),NCBI_Entire-Group_218,NCBI_Entire-Group_217,Rhizina_undulata,(Aleuria_aurantia,Wilcoxina_mikolae,Wilcoxina_rehmii,Otidea_onotica,Otidea_concinna,Smardaea_amethystina)),MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_156)))); TREE 'Tree3021_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Sciurus_carolinensis,Sciurus_ignitus,Sciurus_stramineus),NCBI_Entire-Group_013),Marmota_monax),((Nannospalax_ehrenbergi,Tachyoryctes_splendens),(Calomyscus,((NCBI_Entire-Group_018,NCBI_Entire-Group_016),((((Rattus_norvegicus,(((Parotomys,((Rhabdomys_pumilio,Arvicanthis_somalicus),Aethomys_namaquensis)),(Mus_musculus,Praomys_taitae)),(Apomys_hylocoetes,(Chrotomys_gonzalesi,Rhynchomys_isarogensis)))),Batomys_granti),((Meriones_shawi,(Gerbillurus_vallianus,Tatera_robusta)),Acomys_ignitus)),((NCBI_Entire-Group_020,MyTree0001_Metazoa-Group_14),NCBI_Entire-Group_019)),NCBI_Entire-Group_017))),NCBI_Entire-Group_012)))); TREE 'NCBI_Tree3021_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Acomys_ignitus,Aethomys_namaquensis,Apomys_hylocoetes,Arvicanthis_somalicus,Batomys_granti,Calomyscus,Chrotomys_gonzalesi,Mus_musculus,Nannospalax_ehrenbergi,Parotomys,Praomys_taitae,Rattus_norvegicus,Rhabdomys_pumilio,Rhynchomys_isarogensis,Tachyoryctes_splendens,(Gerbillurus_vallianus,Meriones_shawi,Tatera_robusta),NCBI_Entire-Group_020,NCBI_Entire-Group_019,NCBI_Entire-Group_018,NCBI_Entire-Group_017,NCBI_Entire-Group_016,MyTree0001_Metazoa-Group_14),((Marmota_monax,Sciurus_carolinensis,Sciurus_ignitus,Sciurus_stramineus),NCBI_Entire-Group_013),NCBI_Entire-Group_012)))); TREE 'Tree3055_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((NCBI_Entire-Group_219,NCBI_Entire-Group_220),NCBI_Entire-Group_164),(((Ophioceras_tenuisporum,(Pseudohalonectria_lignicola,Pseudohalonectria_falcata)),NCBI_Entire-Group_170),((NCBI_Entire-Group_175,NCBI_Entire-Group_174),(Cryphonectria_cubensis,((Endothia_gyrosa,Cryphonectria_parasitica),((Valsa_ambiens,Leucostoma_persoonii),(Phruensis_brunneispora,Lollipopaia_minuta))))))),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2)),(MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,((Microascus_cirrosus,(Petriella_setifera,Petriella_sordida)),(Nais_inornata,(Halosphaeria_appendiculata,Nimbospora_effusa))))),MyTree0001_Not_Metazoa-Group_4),NCBI_Entire-Group_182)))); TREE 'NCBI_Tree3055_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((NCBI_Entire-Group_219,NCBI_Entire-Group_220),((((NCBI_Entire-Group_175,(Cryphonectria_cubensis,Cryphonectria_parasitica,Endothia_gyrosa,Leucostoma_persoonii,Lollipopaia_minuta,Phruensis_brunneispora,Valsa_ambiens),NCBI_Entire-Group_174),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),(NCBI_Entire-Group_170,(Microascus_cirrosus,Petriella_setifera,Petriella_sordida))),(Halosphaeria_appendiculata,Nais_inornata,Nimbospora_effusa),(MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182)),(Ophioceras_tenuisporum,Pseudohalonectria_falcata,Pseudohalonectria_lignicola),NCBI_Entire-Group_164))))); TREE 'Tree3056_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Daubentonia_madagascariensis,((((Cheirogaleus_major,(Mirza_coquereli,(Microcebus_ravelobensis,Microcebus_murinus))),NCBI_Entire-Group_028),NCBI_Entire-Group_029),NCBI_Entire-Group_030)),(MyTree0001_Metazoa-Nycticebus_coucang,(Galago_moholi,Galago_demidoff))),((Cebus_olivaceus,(Callithrix_jacchus,Saguinus)),(((Macaca_speciosa,(Cercopithecus_aethiops,Erythrocebus_patas)),NCBI_Entire-Group_025),(Pongo_pygmaeus,MyTree0001_Metazoa-Group_7)))),MyTree0001_Metazoa-Group_6)))); TREE 'NCBI_Tree3056_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Daubentonia_madagascariensis,Galago_demidoff,Galago_moholi,(Cheirogaleus_major,Microcebus_murinus,Microcebus_ravelobensis,Mirza_coquereli),NCBI_Entire-Group_030,MyTree0001_Metazoa-Nycticebus_coucang,NCBI_Entire-Group_028,NCBI_Entire-Group_029),(Cebus_olivaceus,(Callithrix_jacchus,Saguinus)),(((Cercopithecus_aethiops,Erythrocebus_patas,Macaca_speciosa),NCBI_Entire-Group_025),(Pongo_pygmaeus,MyTree0001_Metazoa-Group_7))),MyTree0001_Metazoa-Group_6)))); TREE 'Tree3057_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((NCBI_Entire-Group_027,(((Eulemur_fulvus,Eulemur_macaco),(Lemur_catta,Hapalemur_griseus)),Varecia_variegata)),NCBI_Entire-Group_026),(MyTree0001_Metazoa-Group_9,((MyTree0001_Metazoa-Group_8,NCBI_Entire-Group_025),MyTree0001_Metazoa-Group_7))),(MyTree0001_Metazoa-Group_12,NCBI_Entire-Group_010)),NCBI_Entire-Group_031)))); TREE 'NCBI_Tree3057_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((NCBI_Entire-Group_027,(Eulemur_fulvus,Eulemur_macaco,Hapalemur_griseus,Lemur_catta,Varecia_variegata),NCBI_Entire-Group_026),MyTree0001_Metazoa-Group_9,((MyTree0001_Metazoa-Group_8,NCBI_Entire-Group_025),MyTree0001_Metazoa-Group_7)),(MyTree0001_Metazoa-Group_12,NCBI_Entire-Group_010),NCBI_Entire-Group_031)))); TREE 'Tree3058_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((Daubentonia_madagascariensis,((((Cheirogaleus_major,(Mirza_coquereli,((Microcebus_ravelobensis,(Microcebus_sambiranensis,(Microcebus_tavaratra,(Microcebus_rufus,(Microcebus_berthae,Microcebus_myoxinus))))),(Microcebus_murinus,Microcebus_griseorufus)))),NCBI_Entire-Group_028),NCBI_Entire-Group_029),NCBI_Entire-Group_030)),(Galago_demidoff,MyTree0001_Metazoa-Nycticebus_coucang)),(((Pongo_pygmaeus,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_8),MyTree0001_Metazoa-Group_9)),((Canis_lupus,NCBI_Entire-Group_010),(((MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa),Bos_taurus),Equus_caballus))),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'NCBI_Tree3058_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Equus_caballus,(Bos_taurus,MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa),((Daubentonia_madagascariensis,Galago_demidoff,(Cheirogaleus_major,Microcebus_berthae,Microcebus_griseorufus,Microcebus_murinus,Microcebus_myoxinus,Microcebus_ravelobensis,Microcebus_rufus,Microcebus_sambiranensis,Microcebus_tavaratra,Mirza_coquereli),NCBI_Entire-Group_030,MyTree0001_Metazoa-Nycticebus_coucang,NCBI_Entire-Group_028,NCBI_Entire-Group_029),((Pongo_pygmaeus,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_8),MyTree0001_Metazoa-Group_9),(Canis_lupus,NCBI_Entire-Group_010)),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'Tree3059_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((((((Mirza_coquereli,Microcebus_murinus),Cheirogaleus_major),NCBI_Entire-Group_028),NCBI_Entire-Group_029),NCBI_Entire-Group_030),Daubentonia_madagascariensis),(MyTree0001_Metazoa-Nycticebus_coucang,(Galago_moholi,Galago_demidoff))),(MyTree0001_Metazoa-Group_9,((((Erythrocebus_patas,Cercopithecus_aethiops),Macaca_speciosa),NCBI_Entire-Group_025),(Pongo_pygmaeus,MyTree0001_Metazoa-Group_7)))),((Canis_lupus,NCBI_Entire-Group_010),((Bos_taurus,(MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa)),(Tapirus_pinchaque,Equus_caballus)))),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'NCBI_Tree3059_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Bos_taurus,MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa),((Daubentonia_madagascariensis,Galago_demidoff,Galago_moholi,(Cheirogaleus_major,Microcebus_murinus,Mirza_coquereli),NCBI_Entire-Group_030,MyTree0001_Metazoa-Nycticebus_coucang,NCBI_Entire-Group_028,NCBI_Entire-Group_029),MyTree0001_Metazoa-Group_9,(((Cercopithecus_aethiops,Erythrocebus_patas,Macaca_speciosa),NCBI_Entire-Group_025),(Pongo_pygmaeus,MyTree0001_Metazoa-Group_7))),(Canis_lupus,NCBI_Entire-Group_010),(Equus_caballus,Tapirus_pinchaque)),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'Tree3061_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Pleurotus_ostreatus,((Coprinus_cinereus,Pleurotus_populinus),((((Pleurotus_djamor,Pleurotus_australis),Pleurotus_cystidiosus),Pleurotus_eryngii),NCBI_Entire-Group_146))),MyTree0001_Not_Metazoa-Cryptococcus_neoformans)))); TREE 'NCBI_Tree3061_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Pleurotus_ostreatus,Pleurotus_eryngii,Coprinus_cinereus,Pleurotus_cystidiosus,Pleurotus_populinus,Pleurotus_djamor,Pleurotus_australis,NCBI_Entire-Group_146),MyTree0001_Not_Metazoa-Cryptococcus_neoformans)))); TREE 'Tree3065_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((((Agaricus_bisporus,Lycoperdon),Typhula_phacorhiza),(((Amanita_muscaria,Chondrostereum_purpureum),Entoloma_strictius),(((Nia_vibrissa,NCBI_Entire-Group_148),Schizophyllum_commune),Pleurotus_ostreatus))),(NCBI_Entire-Group_139,NCBI_Entire-Group_140)),Hyphodontia_alutaria),(((((Amylostereum_laevigatum,Echinodontium_tinctorium),NCBI_Entire-Group_149),(Auriscalpium_vulgare,Russula_compacta)),Heterobasidion_annosum_species_complex),Stereum_hirsutum),((Meripilus_giganteus,(Ceriporia_purpurea,NCBI_Entire-Group_154)),((((Antrodia_carbonica,Auriporia_aurea),(Oligoporus_rennyi,Tyromyces_lacteus),Laetiporus_sulphureus),Fomitopsis_pinicola),(Dentocorticium_sulphurellum,(Ganoderma_australe,NCBI_Entire-Group_151)))),((NCBI_Entire-Group_143,NCBI_Entire-Group_155),Gautieria_otthii),Thelephora,NCBI_Entire-Group_144),NCBI_Entire-Group_142),NCBI_Entire-Group_132)))); TREE 'NCBI_Tree3065_Fungi' = [&R] (((((Nia_vibrissa,Gautieria_otthii,(NCBI_Entire-Group_139,NCBI_Entire-Group_140),(Typhula_phacorhiza,Thelephora),Echinodontium_tinctorium,(NCBI_Entire-Group_144,NCBI_Entire-Group_143),Lycoperdon,(Entoloma_strictius,Amanita_muscaria,Russula_compacta,Agaricus_bisporus,(Heterobasidion_annosum_species_complex,Chondrostereum_purpureum,Schizophyllum_commune),Pleurotus_ostreatus),(NCBI_Entire-Group_149,Auriscalpium_vulgare,Ganoderma_australe,((Tyromyces_lacteus,Auriporia_aurea,Oligoporus_rennyi,Fomitopsis_pinicola,Meripilus_giganteus,Ceriporia_purpurea,Antrodia_carbonica,Laetiporus_sulphureus),Hyphodontia_alutaria,Dentocorticium_sulphurellum,((Amylostereum_laevigatum,Stereum_hirsutum),NCBI_Entire-Group_154,NCBI_Entire-Group_155)),NCBI_Entire-Group_148,NCBI_Entire-Group_151),NCBI_Entire-Group_142),NCBI_Entire-Group_132),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree3082_Viridiplantae' = [&R] ((((((Wajira_danissana,(Wajira_albescens,(Wajira_grahamiana,(Wajira_praecox,Wajira_virescens)))),((((Vatovaea_pseudolablab,Spathionema_kilimandscharicum),(Lablab_purpureus,Dipogon_lignosus)),((Physostigma_venenosum,((Vigna_monophylla,Vigna_luteola),((Vigna_friesiorum,(Vigna_unguiculata,(Vigna_umbellata,Vigna_mungo))),(Vigna_trichocarpa,(Vigna_lasiocarpa,Vigna_longifolia))))),((Oxyrhynchus_volubilis,Ramirezella_strobilophora),(Phaseolus_vulgaris,((Vigna_eckmanniana,(Vigna_latidenticulata,Vigna_peduncularis)),(((Vigna_adenantha,Vigna_gentryi),Vigna_spectabilis),((Macroptilium_atropurpureum,Mysanthus_uleanus),(Strophostyles_umbellata,Dolichopsis_paraguariensis)))))))),((Sphenostylis_angustifolia,Sphenostylis_stenocarpa),((Nesphostylis_holosericea,Dolichos_trilobus),(Macrotyloma_ellipticum,(Decorsea_schlechteri,Macrotyloma_daltonii)))))),(Pueraria_montana,(Amphicarpaea_bracteata,Glycine_max))),Cologania_hintoniorum),(Metazoa,Fungi)),Bacteria,Archaea); TREE 'NCBI_Tree3082_Viridiplantae' = [&R] (((Metazoa,Fungi),(Wajira_virescens,Wajira_praecox,Wajira_grahamiana,Wajira_danissana,Wajira_albescens,Vigna_unguiculata,Vigna_umbellata,Vigna_trichocarpa,Vigna_spectabilis,Vigna_peduncularis,Vigna_mungo,Vigna_monophylla,Vigna_luteola,Vigna_longifolia,Vigna_latidenticulata,Vigna_lasiocarpa,Vigna_gentryi,Vigna_friesiorum,Vigna_eckmanniana,Vigna_adenantha,Vatovaea_pseudolablab,Strophostyles_umbellata,Sphenostylis_stenocarpa,Sphenostylis_angustifolia,Spathionema_kilimandscharicum,Ramirezella_strobilophora,Pueraria_montana,Physostigma_venenosum,Phaseolus_vulgaris,Oxyrhynchus_volubilis,Nesphostylis_holosericea,Mysanthus_uleanus,Macrotyloma_ellipticum,Macrotyloma_daltonii,Macroptilium_atropurpureum,Lablab_purpureus,Glycine_max,Dolichos_trilobus,Dolichopsis_paraguariensis,Dipogon_lignosus,Decorsea_schlechteri,Cologania_hintoniorum,Amphicarpaea_bracteata)),Bacteria,Archaea); TREE 'Tree3118_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((((((Stictis_radiata,NCBI_Entire-Group_228),(Trapeliopsis_granulosa,(Trapelia_placodioides,Placopsis_gelida))),(NCBI_Entire-Group_225,MyTree0001_Not_Metazoa-Group_6)),(((NCBI_Entire-Group_234,NCBI_Entire-Group_235),NCBI_Entire-Group_232),NCBI_Entire-Group_233)),((Glyphium_elatum,(Ceramothyrium_carniolicum,NCBI_Entire-Group_241)),(Eupenicillium_javanicum,(Emericella_nidulans,((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger),Eurotium_rubrum))))),((NCBI_Entire-Group_163,NCBI_Entire-Group_199),NCBI_Entire-Group_209)),Paecilomyces_tenuipes),MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_164),NCBI_Entire-Group_162)))); TREE 'NCBI_Tree3118_Fungi' = [&R] (((((((NCBI_Entire-Group_162,NCBI_Entire-Group_163,NCBI_Entire-Group_164),(NCBI_Entire-Group_199,NCBI_Entire-Group_209),MyTree0001_Not_Metazoa-Group_2),((Trapeliopsis_granulosa,Trapelia_placodioides,Placopsis_gelida),NCBI_Entire-Group_225,(Stictis_radiata,NCBI_Entire-Group_228),(NCBI_Entire-Group_232,NCBI_Entire-Group_233,NCBI_Entire-Group_234,NCBI_Entire-Group_235)),(Emericella_nidulans,Paecilomyces_tenuipes,Eupenicillium_javanicum,Eurotium_rubrum,Aspergillus_fumigatus,Aspergillus_niger,Aspergillus_flavus,Aspergillus_aculeatus),(Glyphium_elatum,Ceramothyrium_carniolicum,NCBI_Entire-Group_241)),MyTree0001_Not_Metazoa-Group_6),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree3150_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Cordyceps_takaomontana,Paecilomyces_fumosoroseus),((Cordyceps_militaris,Cordyceps_bassiana),NCBI_Entire-Group_185)),MyTree0001_Not_Metazoa-Group_6),(((Paecilomyces_lilacinus,Paecilomyces_nostocoides),Ephelis_japonica),(Acremonium_lolii,Claviceps_purpurea))),MyTree0001_Not_Metazoa-Group_4)))); TREE 'NCBI_Tree3150_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Paecilomyces_lilacinus,Paecilomyces_fumosoroseus,Paecilomyces_nostocoides),((Claviceps_purpurea,Cordyceps_militaris,Acremonium_lolii,Ephelis_japonica,Cordyceps_takaomontana,Cordyceps_bassiana,NCBI_Entire-Group_185),MyTree0001_Not_Metazoa-Group_4)),MyTree0001_Not_Metazoa-Group_6)))); TREE 'Tree3151_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((((Cordyceps_takaomontana,Paecilomyces_fumosoroseus),Cordyceps_militaris),Cordyceps_bassiana),NCBI_Entire-Group_185),MyTree0001_Not_Metazoa-Group_6),((Paecilomyces_lilacinus,Paecilomyces_nostocoides),(Ephelis_japonica,Acremonium_lolii))),Claviceps_purpurea),MyTree0001_Not_Metazoa-Group_4)))); TREE 'NCBI_Tree3151_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Paecilomyces_lilacinus,Paecilomyces_fumosoroseus,Paecilomyces_nostocoides),((Claviceps_purpurea,Cordyceps_militaris,Acremonium_lolii,Ephelis_japonica,Cordyceps_takaomontana,Cordyceps_bassiana,NCBI_Entire-Group_185),MyTree0001_Not_Metazoa-Group_4)),MyTree0001_Not_Metazoa-Group_6)))); TREE 'Tree3152_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((Cordyceps_takaomontana,Cordyceps_militaris,(Cordyceps_bassiana,Cordyceps_brongniartii),Cordyceps_memorabilis),Cordyceps_subsessilis),(Ephelis_japonica,(Acremonium_lolii,Neotyphodium_uncinatum),Claviceps_purpurea),MyTree0001_Not_Metazoa-Group_5),MyTree0001_Not_Metazoa-Group_4)))); TREE 'NCBI_Tree3152_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(MyTree0001_Not_Metazoa-Group_5,(MyTree0001_Not_Metazoa-Group_4,(Acremonium_lolii,Claviceps_purpurea,Cordyceps_bassiana,Cordyceps_brongniartii,Cordyceps_memorabilis,Cordyceps_militaris,Cordyceps_subsessilis,Cordyceps_takaomontana,Ephelis_japonica,Neotyphodium_uncinatum)))))); TREE 'Tree3153_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Cordyceps_takaomontana,((Cordyceps_militaris,(Cordyceps_bassiana,Cordyceps_brongniartii)),Cordyceps_memorabilis)),Cordyceps_subsessilis,Ephelis_japonica,(Acremonium_lolii,Neotyphodium_uncinatum),Claviceps_purpurea,MyTree0001_Not_Metazoa-Group_5),MyTree0001_Not_Metazoa-Group_4)))); TREE 'NCBI_Tree3153_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(MyTree0001_Not_Metazoa-Group_5,(MyTree0001_Not_Metazoa-Group_4,(Acremonium_lolii,Claviceps_purpurea,Cordyceps_bassiana,Cordyceps_brongniartii,Cordyceps_memorabilis,Cordyceps_militaris,Cordyceps_subsessilis,Cordyceps_takaomontana,Ephelis_japonica,Neotyphodium_uncinatum)))))); TREE 'Tree3159_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Myrothecium_inundatum,Peethambara_sundara),(Stachybotrys_chartarum,Stachybotrys_echinata)),Stachybotrys_bisbyi),((((((((Nectria_rigidiuscula,(Fusarium_verticillioides,Gibberella_fujikuroi)),((Neocosmospora_vasinfecta,Nectria_haematococca),Viridispora_diparietispora)),((Nectria_mariannaeae,Mariannaea_camptospora),(Calonectria_morganii,Calonectria_pyrochroa))),Neonectria_radicicola),(Nectria_pseudotrichia,Nectria_cinnabarina)),(((Hypocrea_lutea,MyTree0001_Not_Metazoa-Group_3),Hypomyces_odoratus),Sphaerostilbella_aureonitens)),((Torrubiella_luteorostrata,Metarhizium_anisopliae),((Acremonium_lolii,Neotyphodium_coenophialum),Verticillium_lecanii))),((((((Nalanthamala_squamicola,Hydropisphaera_erubescens),Hydropisphaera_arenula),(Roumegueriella_rufula,Hydropisphaera_peziza)),(Nectriopsis_sporangiicola,Nectriopsis_violacea)),((Bionectria_ralfsii,Clonostachys_miodochialis),(Bionectria_zelandiaenovae,Bionectria_ochroleuca))),(Acremonium_alternatum,MyTree0001_Not_Metazoa-Group_6)))),MyTree0001_Not_Metazoa-Group_5,Verticillium_dahliae)))); TREE 'NCBI_Tree3159_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((MyTree0001_Not_Metazoa-Group_5,((Neotyphodium_coenophialum,(Verticillium_dahliae,Verticillium_lecanii,Torrubiella_luteorostrata),Metarhizium_anisopliae,Acremonium_lolii,Nalanthamala_squamicola,Mariannaea_camptospora),(Stachybotrys_chartarum,Stachybotrys_echinata,Stachybotrys_bisbyi),((Bionectria_ochroleuca,Hypocrea_lutea,Nectriopsis_sporangiicola,Sphaerostilbella_aureonitens,Acremonium_alternatum,Hypomyces_odoratus,Nectriopsis_violacea,Bionectria_zelandiaenovae,Bionectria_ralfsii,Clonostachys_miodochialis,MyTree0001_Not_Metazoa-Group_3),Roumegueriella_rufula,Hydropisphaera_erubescens,Hydropisphaera_peziza,Myrothecium_inundatum,Peethambara_sundara,Hydropisphaera_arenula),(Gibberella_fujikuroi,Nectria_cinnabarina,Nectria_pseudotrichia,Viridispora_diparietispora,Neocosmospora_vasinfecta,Calonectria_morganii,Calonectria_pyrochroa,Nectria_rigidiuscula,Neonectria_radicicola,Nectria_mariannaeae,Fusarium_verticillioides,Nectria_haematococca))),MyTree0001_Not_Metazoa-Group_6)))); TREE 'Tree3168_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Agaricus_bisporus,(Agaricus_campestris,(((Laccaria_amethystina,(((((Amanita_muscaria,Henningsomyces_candidus),Chondrostereum_purpureum),(Physalacria_maipoensis,(((Calathella_mangrovei,(Halocyphina_villosa,Nia_vibrissa)),Merismodes_fasciculata),Lentinula_edodes))),(((Pleurotus_ostreatus,Cyathus_striatus),(Panellus_stypticus,Favolaschia_pezizaeformis)),((Schizophyllum_commune,NCBI_Entire-Group_147),(NCBI_Entire-Group_139,NCBI_Entire-Group_140)))),Limnoperdon_incarnatum)),(Lepiota_procera,Leucoagaricus_naucinus)),Macrolepiota_rachodes)))))); TREE 'NCBI_Tree3168_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Halocyphina_villosa,Limnoperdon_incarnatum),NCBI_Entire-Group_147),(Pleurotus_ostreatus,(Schizophyllum_commune,Chondrostereum_purpureum,Henningsomyces_candidus),(Agaricus_bisporus,Leucoagaricus_naucinus,Macrolepiota_rachodes,Lepiota_procera,Agaricus_campestris),(Lentinula_edodes,Panellus_stypticus,Laccaria_amethystina,Merismodes_fasciculata,Physalacria_maipoensis),Amanita_muscaria,Calathella_mangrovei,Favolaschia_pezizaeformis),Cyathus_striatus,(NCBI_Entire-Group_139,NCBI_Entire-Group_140),Nia_vibrissa)))); TREE 'Tree3237_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((((Uncinuliella_australiana,(Erysiphe_orontii,Golovinomyces_cichoracearum)),Sphaerotheca_filipendulae),Hymenoscyphus_fructigenus),(Ascocoryne_sarcoides,Coniochaeta_ligniaria)),((NCBI_Entire-Group_195,NCBI_Entire-Group_190),NCBI_Entire-Group_192),Rhytisma_acerinum,NCBI_Entire-Group_191),Bisporella_citrina),(NCBI_Entire-Group_186,Lophodermium_pinastri)),(NCBI_Entire-Group_180,NCBI_Entire-Group_245),(((MyTree0001_Not_Metazoa-Magnaporthe_grisea,NCBI_Entire-Group_178),(Neurospora_crassa,MyTree0001_Not_Metazoa-Group_1)),NCBI_Entire-Group_170)),((((NCBI_Entire-Group_203,NCBI_Entire-Group_204),NCBI_Entire-Group_205),(((((NCBI_Entire-Group_207,(Byssothecium_circinans,NCBI_Entire-Group_206),NCBI_Entire-Group_212),Pleomassaria_siparia),(NCBI_Entire-Group_209,NCBI_Entire-Group_210)),MyTree0001_Not_Metazoa-Group_6),(Lojkania_enalia,NCBI_Entire-Group_197))),NCBI_Entire-Group_208),NCBI_Entire-Group_222)))); TREE 'NCBI_Tree3237_Fungi' = [&R] (((((((Sphaerotheca_filipendulae,Uncinuliella_australiana,Erysiphe_orontii,Golovinomyces_cichoracearum),(((Coniochaeta_ligniaria,Neurospora_crassa,MyTree0001_Not_Metazoa-Group_1),NCBI_Entire-Group_170,NCBI_Entire-Group_178),NCBI_Entire-Group_180),((NCBI_Entire-Group_186,(Rhytisma_acerinum,Lophodermium_pinastri)),(NCBI_Entire-Group_190,(Bisporella_citrina,Ascocoryne_sarcoides,Hymenoscyphus_fructigenus),NCBI_Entire-Group_191,NCBI_Entire-Group_192,NCBI_Entire-Group_195)),((Byssothecium_circinans,(Lojkania_enalia,NCBI_Entire-Group_207,NCBI_Entire-Group_203,NCBI_Entire-Group_204,NCBI_Entire-Group_205,NCBI_Entire-Group_206,NCBI_Entire-Group_208),Pleomassaria_siparia,NCBI_Entire-Group_209,NCBI_Entire-Group_210,NCBI_Entire-Group_212),NCBI_Entire-Group_197),MyTree0001_Not_Metazoa-Magnaporthe_grisea),NCBI_Entire-Group_222),MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_245),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree3280_Bacteria' = [&R] (Archaea,Eukaryota,((NCBI_Entire-Group_331,NCBI_Entire-Group_300),NCBI_Entire-Group_311,NCBI_Entire-Group_312)); TREE 'NCBI_Tree3280_Bacteria' = [&R] (Archaea,(((NCBI_Entire-Group_311,NCBI_Entire-Group_312),NCBI_Entire-Group_331),NCBI_Entire-Group_300),Eukaryota); TREE 'Tree3282_Not_Eukaryota' = [&R] (Archaea,(Rhodospirillum_rubrum,((((NCBI_Entire-Group_333,NCBI_Entire-Group_339),NCBI_Entire-Group_327),NCBI_Entire-Group_319,NCBI_Entire-Group_316),NCBI_Entire-Group_318)),Eukaryota); TREE 'NCBI_Tree3282_Not_Eukaryota' = [&R] (Eukaryota,Archaea,(((NCBI_Entire-Group_316,NCBI_Entire-Group_318),(Rhodospirillum_rubrum,NCBI_Entire-Group_319),(NCBI_Entire-Group_327,NCBI_Entire-Group_333)),NCBI_Entire-Group_339)); TREE 'Tree3283_Archaea' = [&R] (Eukaryota,(((MyTree0000-Group_0,NCBI_Entire-Group_296),MyTree0000-Group_2),Bacteria)); TREE 'NCBI_Tree3283_Archaea' = [&R] (Eukaryota,Bacteria,(MyTree0000-Group_0,MyTree0000-Group_2,NCBI_Entire-Group_296)); TREE 'Tree3303_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((NCBI_Entire-Group_034,NCBI_Entire-Group_040),MyTree0001_Metazoa-Alligator_mississippiensis),MyTree0001_Metazoa-Chelonia_mydas),MyTree0001_Metazoa-Group_5)))); TREE 'NCBI_Tree3303_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((NCBI_Entire-Group_034,NCBI_Entire-Group_040),(MyTree0001_Metazoa-Alligator_mississippiensis,MyTree0001_Metazoa-Group_5)),MyTree0001_Metazoa-Chelonia_mydas)))); TREE 'Tree3306_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((NCBI_Entire-Group_034,NCBI_Entire-Group_040),MyTree0001_Metazoa-Chelonia_mydas),MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Alligator_mississippiensis)))); TREE 'NCBI_Tree3306_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((NCBI_Entire-Group_034,NCBI_Entire-Group_040),(MyTree0001_Metazoa-Alligator_mississippiensis,MyTree0001_Metazoa-Group_5)),MyTree0001_Metazoa-Chelonia_mydas)))); TREE 'Tree3312_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Pelomedusa_subrufa,(Sphenodon_punctatus,(((((NCBI_Entire-Group_042,NCBI_Entire-Group_041),(((NCBI_Entire-Group_044,NCBI_Entire-Group_043),Chamaeleo_jacksonii),((NCBI_Entire-Group_045,(NCBI_Entire-Group_046,NCBI_Entire-Group_048)),NCBI_Entire-Group_047)),((Agkistrodon_piscivorus,NCBI_Entire-Group_038),NCBI_Entire-Group_037)),(NCBI_Entire-Group_033,NCBI_Entire-Group_035)),((Coleonyx_variegatus,((Teratoscincus_przewalskii,Sphaerodactylus),Tarentola_boettgeri)),Pseudothecadactylus_lindneri)),(NCBI_Entire-Group_034,Cordylus_cordylus),NCBI_Entire-Group_036,NCBI_Entire-Group_039))),MyTree0001_Metazoa-Group_5),NCBI_Entire-Group_053)))); TREE 'NCBI_Tree3312_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Pelomedusa_subrufa,((MyTree0001_Metazoa-Group_5,NCBI_Entire-Group_053),(Sphenodon_punctatus,(((NCBI_Entire-Group_036,NCBI_Entire-Group_035,(Cordylus_cordylus,NCBI_Entire-Group_034)),NCBI_Entire-Group_033,(NCBI_Entire-Group_041,NCBI_Entire-Group_042),((Coleonyx_variegatus,Pseudothecadactylus_lindneri,Sphaerodactylus,Tarentola_boettgeri,Teratoscincus_przewalskii),NCBI_Entire-Group_039),((Agkistrodon_piscivorus,NCBI_Entire-Group_038),NCBI_Entire-Group_037)),((Chamaeleo_jacksonii,(NCBI_Entire-Group_044,NCBI_Entire-Group_043)),(NCBI_Entire-Group_045,NCBI_Entire-Group_046,NCBI_Entire-Group_047,NCBI_Entire-Group_048))))))))); TREE 'Tree3351_Viridiplantae' = [&R] (Archaea,Bacteria,((Fungi,Metazoa),(Ginkgo_biloba,(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_12),MyTree0001_Not_Metazoa-Daucus_carota),MyTree0001_Not_Metazoa-Group_13)))); TREE 'NCBI_Tree3351_Viridiplantae' = [&R] (Archaea,Bacteria,((Ginkgo_biloba,(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_12),MyTree0001_Not_Metazoa-Daucus_carota),MyTree0001_Not_Metazoa-Group_13)),(Fungi,Metazoa))); TREE 'Tree3353_Viridiplantae' = [&R] (Archaea,Bacteria,((Fungi,Metazoa),(((MyTree0001_Not_Metazoa-Group_12,NCBI_Entire-Group_259),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),(NCBI_Entire-Group_270,NCBI_Entire-Group_271)))); TREE 'NCBI_Tree3353_Viridiplantae' = [&R] (Archaea,Bacteria,((NCBI_Entire-Group_270,((MyTree0001_Not_Metazoa-Group_12,NCBI_Entire-Group_259),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),NCBI_Entire-Group_271),(Fungi,Metazoa))); TREE 'Tree3354_Viridiplantae' = [&R] (Archaea,Bacteria,((Fungi,Metazoa),((NCBI_Entire-Group_270,NCBI_Entire-Group_271),((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,NCBI_Entire-Group_259),MyTree0001_Not_Metazoa-Group_12)))); TREE 'NCBI_Tree3354_Viridiplantae' = [&R] (Archaea,Bacteria,((NCBI_Entire-Group_270,((MyTree0001_Not_Metazoa-Group_12,NCBI_Entire-Group_259),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),NCBI_Entire-Group_271),(Fungi,Metazoa))); TREE 'Tree3358_Viridiplantae' = [&R] (Archaea,Bacteria,((Fungi,Metazoa),((((MyTree0001_Not_Metazoa-Group_12,NCBI_Entire-Group_259),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),NCBI_Entire-Group_271),NCBI_Entire-Group_270))); TREE 'NCBI_Tree3358_Viridiplantae' = [&R] (Archaea,Bacteria,((NCBI_Entire-Group_270,((MyTree0001_Not_Metazoa-Group_12,NCBI_Entire-Group_259),MyTree0001_Not_Metazoa-Arabidopsis_thaliana),NCBI_Entire-Group_271),(Fungi,Metazoa))); TREE 'Tree3372_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((Carpoligna_pleurothecii,NCBI_Entire-Group_159),(Chaetosphaeria_innumera,Codinaea_simplex)),(((Glomerella_cingulata,Glomerella_phacidiomorpha),(Plectosphaerella_cucumerina,NCBI_Entire-Group_185)),(((MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_4),((Petriella_setifera,Petriella_sordida),Microascus_trigonosporus)))),((((Daldinia_concentrica,Diatrype_disciformis),Graphostroma_platystoma),Xylaria_hypoxylon),NCBI_Entire-Group_162)),NCBI_Entire-Group_163),Pleospora_herbarum),Setosphaeria_monoceras)))); TREE 'NCBI_Tree3372_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_182),((Glomerella_cingulata,Glomerella_phacidiomorpha,Plectosphaerella_cucumerina),NCBI_Entire-Group_185),MyTree0001_Not_Metazoa-Group_4),((Carpoligna_pleurothecii,Chaetosphaeria_innumera,Codinaea_simplex),(Microascus_trigonosporus,Petriella_setifera,Petriella_sordida))),(Diatrype_disciformis,Graphostroma_platystoma,(Daldinia_concentrica,Xylaria_hypoxylon),NCBI_Entire-Group_162,NCBI_Entire-Group_163),(Pleospora_herbarum,Setosphaeria_monoceras),NCBI_Entire-Group_159)))); TREE 'Tree3373_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Cochliobolus_sativus,(Setosphaeria_rostrata,(Pleospora_betae,(((((((((((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_6),NCBI_Entire-Group_173),Sordaria_fimicola),((Phyllachora_graminis,(Kionochaeta_ramifera,NCBI_Entire-Group_168)),NCBI_Entire-Group_166)),Coniochaeta_ligniaria),NCBI_Entire-Group_175),((((NCBI_Entire-Group_164,Microdochium_nivale),((Graphostroma_platystoma,NCBI_Entire-Group_162),NCBI_Entire-Group_161)),NCBI_Entire-Group_215),Diatrype_disciformis)),((((Fusarium_sambucinum,((NCBI_Entire-Group_180,NCBI_Entire-Group_182),(Sphaerodothis_acrocomiae,NCBI_Entire-Group_184))),Nectria_pseudotrichia),(((Microascus_cirrosus,(Petriella_setifera,Pseudallescheria_boydii)),NCBI_Entire-Group_167),Graphium_penicillioides)),((Glomerella_cingulata,Glomerella_septospora),(Plectosphaerella_cucumerina,(Volutella_colletotrichoides,NCBI_Entire-Group_185))))),NCBI_Entire-Group_197),NCBI_Entire-Group_211),NCBI_Entire-Group_210))))))); TREE 'NCBI_Tree3373_Fungi' = [&R] ((((((Graphostroma_platystoma,Diatrype_disciformis,NCBI_Entire-Group_164,Microdochium_nivale,NCBI_Entire-Group_161,NCBI_Entire-Group_162),((((Graphium_penicillioides,Petriella_setifera,Pseudallescheria_boydii,Microascus_cirrosus),NCBI_Entire-Group_167,NCBI_Entire-Group_168),(Coniochaeta_ligniaria,Kionochaeta_ramifera,MyTree0001_Not_Metazoa-Group_1,Sordaria_fimicola,NCBI_Entire-Group_173),NCBI_Entire-Group_175,NCBI_Entire-Group_166),((Volutella_colletotrichoides,Nectria_pseudotrichia,Fusarium_sambucinum),(((Phyllachora_graminis,Glomerella_septospora,Sphaerodothis_acrocomiae,Plectosphaerella_cucumerina,Glomerella_cingulata),NCBI_Entire-Group_185),NCBI_Entire-Group_184),NCBI_Entire-Group_180,NCBI_Entire-Group_182)),(((Pleospora_betae,Setosphaeria_rostrata,Cochliobolus_sativus),NCBI_Entire-Group_210,NCBI_Entire-Group_211),NCBI_Entire-Group_197),NCBI_Entire-Group_215),MyTree0001_Not_Metazoa-Group_6),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree3374_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Setosphaeria_monoceras,(Pleospora_herbarum,((((((((((Codinaea_simplex,Chaetosphaeria_innumera),Cercophora_newfieldiana),Lasiosphaeria_ovina),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2)),(((Diaporthe_padi,Diaporthe_pustulata),((Valsa_ambiens,Leucostoma_niveum),((((Cryptodiaporthe_aesculi,(Apiognomonia_errabunda,Gnomonia_gnomon)),Phragmoporthe_conformis),Cryptosporella_hypodermia),NCBI_Entire-Group_176))),(((((Xylaria_hypoxylon,Graphostroma_platystoma),(Diatrype_disciformis,Daldinia_concentrica)),Cainia_graminis),(Amphisphaeria_umbrina,Lepteutypa_cupressi)),Oxydothis_frondicola))),MyTree0001_Not_Metazoa-Magnaporthe_grisea),NCBI_Entire-Group_170),(((Petriella_sordida,Petriella_setifera),Microascus_trigonosporus),(((MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_4),((Glomerella_phacidiomorpha,Glomerella_cingulata),(Plectosphaerella_cucumerina,NCBI_Entire-Group_185))))),(NCBI_Entire-Group_159,Carpoligna_pleurothecii)),NCBI_Entire-Group_163)))))); TREE 'NCBI_Tree3374_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Apiognomonia_errabunda,Cryptodiaporthe_aesculi,Cryptosporella_hypodermia,Gnomonia_gnomon,Phragmoporthe_conformis),(Diaporthe_padi,Diaporthe_pustulata,Leucostoma_niveum,Valsa_ambiens),NCBI_Entire-Group_176),(MyTree0001_Not_Metazoa-Group_1,(Cercophora_newfieldiana,Lasiosphaeria_ovina),MyTree0001_Not_Metazoa-Group_2),((Carpoligna_pleurothecii,Chaetosphaeria_innumera,Codinaea_simplex),NCBI_Entire-Group_170,(Microascus_trigonosporus,Petriella_setifera,Petriella_sordida))),((MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_182),((Glomerella_cingulata,Glomerella_phacidiomorpha,Plectosphaerella_cucumerina),NCBI_Entire-Group_185),MyTree0001_Not_Metazoa-Group_4)),(Diatrype_disciformis,Graphostroma_platystoma,(Daldinia_concentrica,Xylaria_hypoxylon),(Amphisphaeria_umbrina,Cainia_graminis,Lepteutypa_cupressi,Oxydothis_frondicola),NCBI_Entire-Group_163),(Pleospora_herbarum,Setosphaeria_monoceras),MyTree0001_Not_Metazoa-Magnaporthe_grisea,NCBI_Entire-Group_159)))); TREE 'Tree3375_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_180),NCBI_Entire-Group_169),(((((((Neurospora_crassa,Sordaria_fimicola),MyTree0001_Not_Metazoa-Group_1),NCBI_Entire-Group_173),NCBI_Entire-Group_166),NCBI_Entire-Group_168),(((NCBI_Entire-Group_175,NCBI_Entire-Group_176),(Leucostoma_niveum,Valsa_ambiens)),Diaporthe_pustulata)),(((Ascolacicola_austriaca,NCBI_Entire-Group_172),NCBI_Entire-Group_170),((Gaeumannomyces_graminis,Magnaporthe_grisea),(Ceratosphaeria_lampadophora,Ophioceras_tenuisporum))))),(((((Xylaria_hypoxylon,Graphostroma_platystoma),(Daldinia_concentrica,Diatrype_disciformis)),NCBI_Entire-Group_215),(Amphisphaeria_umbrina,Lepteutypa_cupressi)),Oxydothis_frondicola)),NCBI_Entire-Group_212)))); TREE 'NCBI_Tree3375_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(NCBI_Entire-Group_215,((Ceratosphaeria_lampadophora,(NCBI_Entire-Group_175,(Diaporthe_pustulata,Leucostoma_niveum,Valsa_ambiens),NCBI_Entire-Group_176),(Ascolacicola_austriaca,MyTree0001_Not_Metazoa-Group_1,(Neurospora_crassa,Sordaria_fimicola),NCBI_Entire-Group_172,NCBI_Entire-Group_173),(NCBI_Entire-Group_170,NCBI_Entire-Group_169,NCBI_Entire-Group_168),NCBI_Entire-Group_166),(MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_180)),(Diatrype_disciformis,Graphostroma_platystoma,(Daldinia_concentrica,Xylaria_hypoxylon),(Amphisphaeria_umbrina,Lepteutypa_cupressi,Oxydothis_frondicola)),(Gaeumannomyces_graminis,Magnaporthe_grisea,Ophioceras_tenuisporum),NCBI_Entire-Group_212)))); TREE 'Tree3376_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Cochliobolus_sativus,(Pleospora_betae,((((((((MyTree0001_Not_Metazoa-Group_1,NCBI_Entire-Group_173),Sordaria_fimicola),(NCBI_Entire-Group_166,NCBI_Entire-Group_168)),Coniochaeta_ligniaria),((NCBI_Entire-Group_175,(Cryphonectria_parasitica,Endothia_gyrosa)),(Leucostoma_persoonii,Diaporthe_phaseolorum))),((MyTree0001_Not_Metazoa-Magnaporthe_grisea,Ceratosphaeria_lampadophora),NCBI_Entire-Group_170)),(((Diatrype_disciformis,NCBI_Entire-Group_164),(Graphostroma_platystoma,NCBI_Entire-Group_161)),NCBI_Entire-Group_215)),(((Fusarium_sambucinum,((NCBI_Entire-Group_180,NCBI_Entire-Group_182),NCBI_Entire-Group_184)),Nectria_pseudotrichia),(NCBI_Entire-Group_169,NCBI_Entire-Group_167)))))))); TREE 'NCBI_Tree3376_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(NCBI_Entire-Group_215,((Ceratosphaeria_lampadophora,(NCBI_Entire-Group_175,(Cryphonectria_parasitica,Diaporthe_phaseolorum,Endothia_gyrosa,Leucostoma_persoonii)),(Coniochaeta_ligniaria,Sordaria_fimicola,MyTree0001_Not_Metazoa-Group_1,NCBI_Entire-Group_173),(NCBI_Entire-Group_170,NCBI_Entire-Group_169,NCBI_Entire-Group_167,NCBI_Entire-Group_168),NCBI_Entire-Group_166),((Fusarium_sambucinum,Nectria_pseudotrichia),NCBI_Entire-Group_180,NCBI_Entire-Group_182,NCBI_Entire-Group_184)),(Diatrype_disciformis,Graphostroma_platystoma,NCBI_Entire-Group_161,NCBI_Entire-Group_164),(Cochliobolus_sativus,Pleospora_betae),MyTree0001_Not_Metazoa-Magnaporthe_grisea)))); TREE 'Tree3381_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((MyTree0001_Metazoa-Group_11,Bos_taurus),Odocoileus_virginianus),Tragulus_napu),MyTree0001_Metazoa-Group_10),MyTree0001_Metazoa-Sus_scrofa),NCBI_Entire-Group_008)))); TREE 'NCBI_Tree3381_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(MyTree0001_Metazoa-Group_10,NCBI_Entire-Group_008,(Tragulus_napu,(Odocoileus_virginianus,(Bos_taurus,MyTree0001_Metazoa-Group_11))),MyTree0001_Metazoa-Sus_scrofa)))); TREE 'Tree3414_Fungi' = [&R] (((((Penicillium_citrinum,((Penicillium_manginii,(Penicillium_decaturense,(Penicillium_rivolii,Penicillium_waksmanii,Penicillium_miczynskii))),(Penicillium_paxilli,(((Penicillium_vinaceum,((Penicillium_melinii,Penicillium_decumbens),Penicillium_restrictum)),((Penicillium_capsulatum,Penicillium_cyaneum),(Penicillium_raperi,Penicillium_rolfsii))),((Penicillium_canescens,((Penicillium_soppii,Penicillium_kojigenum),Penicillium_atramentosum)),((((Penicillium_adametzioides,Penicillium_angularum),Penicillium_bilaiae),((Penicillium_herquei,Penicillium_sclerotiorum),(Penicillium_brocae,(Penicillium_lividum,(Penicillium_thomii,Penicillium_spinulosum))))),Penicillium_thiersii)))))),Penicillium_aculeatum),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree3414_Fungi' = [&R] ((((Penicillium_waksmanii,Penicillium_vinaceum,Penicillium_thomii,Penicillium_thiersii,Penicillium_spinulosum,Penicillium_soppii,Penicillium_sclerotiorum,Penicillium_rolfsii,Penicillium_rivolii,Penicillium_restrictum,Penicillium_raperi,Penicillium_paxilli,Penicillium_miczynskii,Penicillium_melinii,Penicillium_manginii,Penicillium_lividum,Penicillium_kojigenum,Penicillium_herquei,Penicillium_decumbens,Penicillium_decaturense,Penicillium_cyaneum,Penicillium_citrinum,Penicillium_capsulatum,Penicillium_canescens,Penicillium_brocae,Penicillium_bilaiae,Penicillium_atramentosum,Penicillium_angularum,Penicillium_adametzioides,Penicillium_aculeatum),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree3419_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_3,(MyTree0001_Metazoa-Group_1,NCBI_Entire-Group_088)),((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Oncorhynchus_mykiss),MyTree0001_Metazoa-Group_7))))); TREE 'NCBI_Tree3419_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Oncorhynchus_mykiss),MyTree0001_Metazoa-Group_7),(MyTree0001_Metazoa-Group_3,(NCBI_Entire-Group_088,MyTree0001_Metazoa-Group_1)))))); TREE 'Tree3440_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Myriogenospora_atramentosa,((Balansia_henningsiana,Balansia_brunnans),Balansia_strangulans),Balansia_obtecta),Atkinsonella_hypoxylon),(((((Atricordyceps_harposporifera,(Cordycepioideus_bisporus,Cordyceps_cochlidiicola)),((Cordyceps_kanzashiana,Cordyceps_ramosopulvinata),Cordyceps_prolifica)),(Hyperdermium_bertonii,(Cordyceps_militaris,(Cordyceps_tuberculata,Cordyceps_takaomontana)))),(((Cordyceps_capitata,(Cordyceps_ophioglossoides,Cordyceps_subsessilis)),Cordyceps_inegoensis),Cordyceps_japonica)),(((Claviceps_africana,Claviceps_ranunculoides),(Claviceps_fusiformis,Claviceps_purpurea)),Claviceps_paspali))),((Epichloe_amarillans,Acremonium_lolii),(Dussiella_tuberiformis,NCBI_Entire-Group_185))),(Ustilaginoidea_virens,Neomunkia_sydowii)),((Hypocrea_lutea,MyTree0001_Not_Metazoa-Group_3),((Hypomyces_rosellus,Hypomyces_armeniacus),Hypomyces_odoratus)))))); TREE 'NCBI_Tree3440_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Acremonium_lolii,Atkinsonella_hypoxylon,Atricordyceps_harposporifera,Balansia_brunnans,Balansia_henningsiana,Balansia_obtecta,Balansia_strangulans,Claviceps_africana,Claviceps_fusiformis,Claviceps_paspali,Claviceps_purpurea,Claviceps_ranunculoides,Cordycepioideus_bisporus,Cordyceps_capitata,Cordyceps_cochlidiicola,Cordyceps_inegoensis,Cordyceps_japonica,Cordyceps_kanzashiana,Cordyceps_militaris,Cordyceps_ophioglossoides,Cordyceps_prolifica,Cordyceps_ramosopulvinata,Cordyceps_subsessilis,Cordyceps_takaomontana,Cordyceps_tuberculata,Dussiella_tuberiformis,Epichloe_amarillans,Hyperdermium_bertonii,Myriogenospora_atramentosa,Neomunkia_sydowii,Ustilaginoidea_virens,NCBI_Entire-Group_185),(Hypocrea_lutea,Hypomyces_armeniacus,Hypomyces_odoratus,Hypomyces_rosellus,MyTree0001_Not_Metazoa-Group_3))))); TREE 'Tree3444_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((Mesomys_hispidus,((Echimys_chrysurus,Phyllomys_blainvilii),(Makalata_didelphoides,Makalata_macrura))),(Isothrix_bistriata,(Dactylomys_boliviensis,Kannabateomys_amblyonyx))),(Thrichomys_apereoides,(Proechimys_simonsi,Proechimys_quadruplicatus))),((Trinomys_yonenagae,(Trinomys_paratus,Trinomys_setosus)),(Clyomys_laticeps,Euryzygomatomys_spinosus))),MyTree0001_Metazoa-Cavia_porcellus)))); TREE 'NCBI_Tree3444_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Clyomys_laticeps,Dactylomys_boliviensis,Echimys_chrysurus,Euryzygomatomys_spinosus,Isothrix_bistriata,Kannabateomys_amblyonyx,Makalata_didelphoides,Makalata_macrura,Mesomys_hispidus,Phyllomys_blainvilii,Proechimys_quadruplicatus,Proechimys_simonsi,Thrichomys_apereoides,Trinomys_paratus,Trinomys_setosus,Trinomys_yonenagae),MyTree0001_Metazoa-Cavia_porcellus)))); TREE 'Tree3445_Metazoa' = [&R] (((((((Abrocoma_bennettii,Octodon_lunatus),((((((Phyllomys_blainvilii,Echimys_chrysurus),Makalata_didelphoides),((Dactylomys_dactylinus,Dactylomys_boliviensis),Kannabateomys_amblyonyx)),((Isothrix_bistriata,Isothrix_pagurus),((Mesomys_occultus,Mesomys_hispidus),Lonchothrix_emiliae))),(((((Proechimys_quadruplicatus,(Proechimys_longicaudatus,Proechimys_simonsi)),(Proechimys_guyannensis,Proechimys_cuvieri)),Hoplomys_gymnurus),Myocastor_coypus),Thrichomys_apereoides)),((((Trinomys_iheringi,Trinomys_dimidiatus),Trinomys_gratiosus),((Trinomys_paratus,Trinomys_eliasi),(Trinomys_setosus,Trinomys_yonenagae))),((Euryzygomatomys_spinosus,Clyomys_laticeps),Capromys_pilorides)))),Ctenomys_maulinus),Cavia_porcellus),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree3445_Metazoa' = [&R] (((((Trinomys_yonenagae,Trinomys_setosus,Trinomys_paratus,Trinomys_iheringi,Trinomys_gratiosus,Trinomys_eliasi,Trinomys_dimidiatus,Thrichomys_apereoides,Proechimys_simonsi,Proechimys_quadruplicatus,Proechimys_longicaudatus,Proechimys_guyannensis,Proechimys_cuvieri,Phyllomys_blainvilii,Mesomys_occultus,Mesomys_hispidus,Makalata_didelphoides,Lonchothrix_emiliae,Kannabateomys_amblyonyx,Isothrix_pagurus,Isothrix_bistriata,Hoplomys_gymnurus,Euryzygomatomys_spinosus,Echimys_chrysurus,Dactylomys_dactylinus,Dactylomys_boliviensis,Clyomys_laticeps),Octodon_lunatus,Myocastor_coypus,Ctenomys_maulinus,Cavia_porcellus,Capromys_pilorides,Abrocoma_bennettii),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'Tree3466_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Tragulus_napu,(Odocoileus_virginianus,(Bos_taurus,MyTree0001_Metazoa-Group_11)))))); TREE 'NCBI_Tree3466_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Tragulus_napu,(Odocoileus_virginianus,(Bos_taurus,MyTree0001_Metazoa-Group_11)))))); TREE 'Tree3500_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Myrothecium_inundatum,Peethambara_sundara),(Stachybotrys_chartarum,Stachybotrys_echinata)),Stachybotrys_bisbyi),((((((((Nectria_rigidiuscula,(Fusarium_verticillioides,Gibberella_fujikuroi)),((Neocosmospora_vasinfecta,Nectria_haematococca),Viridispora_diparietispora)),((Nectria_mariannaeae,Mariannaea_camptospora),(Calonectria_morganii,Calonectria_pyrochroa))),Neonectria_radicicola),(Nectria_pseudotrichia,Nectria_cinnabarina)),(((Hypocrea_lutea,MyTree0001_Not_Metazoa-Group_3),Hypomyces_odoratus),Sphaerostilbella_aureonitens)),((Torrubiella_luteorostrata,Metarhizium_anisopliae),((Acremonium_lolii,Neotyphodium_coenophialum),Verticillium_lecanii))),((((((Nalanthamala_squamicola,Hydropisphaera_erubescens),Hydropisphaera_arenula),(Roumegueriella_rufula,Hydropisphaera_peziza)),(Nectriopsis_sporangiicola,Nectriopsis_violacea)),((Bionectria_ralfsii,Clonostachys_miodochialis),(Bionectria_zelandiaenovae,Bionectria_ochroleuca))),(Acremonium_alternatum,MyTree0001_Not_Metazoa-Group_6)))),MyTree0001_Not_Metazoa-Group_5,Verticillium_dahliae)))); TREE 'NCBI_Tree3500_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((MyTree0001_Not_Metazoa-Group_5,((Neotyphodium_coenophialum,(Verticillium_dahliae,Verticillium_lecanii,Torrubiella_luteorostrata),Metarhizium_anisopliae,Acremonium_lolii,Nalanthamala_squamicola,Mariannaea_camptospora),(Stachybotrys_chartarum,Stachybotrys_echinata,Stachybotrys_bisbyi),((Bionectria_ochroleuca,Hypocrea_lutea,Nectriopsis_sporangiicola,Sphaerostilbella_aureonitens,Acremonium_alternatum,Hypomyces_odoratus,Nectriopsis_violacea,Bionectria_zelandiaenovae,Bionectria_ralfsii,Clonostachys_miodochialis,MyTree0001_Not_Metazoa-Group_3),Roumegueriella_rufula,Hydropisphaera_erubescens,Hydropisphaera_peziza,Myrothecium_inundatum,Peethambara_sundara,Hydropisphaera_arenula),(Gibberella_fujikuroi,Nectria_cinnabarina,Nectria_pseudotrichia,Viridispora_diparietispora,Neocosmospora_vasinfecta,Calonectria_morganii,Calonectria_pyrochroa,Nectria_rigidiuscula,Neonectria_radicicola,Nectria_mariannaeae,Fusarium_verticillioides,Nectria_haematococca))),MyTree0001_Not_Metazoa-Group_6)))); TREE 'Tree3670_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((Rattus_norvegicus,Rattus_exulans),Sundamys_muelleri,Berylmys_bowersii),(Parotomys,(((Rhabdomys_pumilio,(Arvicanthis_somalicus,Lemniscomys_barbarus)),Aethomys_namaquensis),Stochomys_longicaudatus))),(((Apomys_hylocoetes,(Archboldomys_luzonensis,(Chrotomys_gonzalesi,Rhynchomys_isarogensis))),((Conilurus_penicillatus,Leggadina_forresti),Pseudomys_australis,Uromys_caudimaculatus)),((((Apodemus_agrarius,Apodemus_semotus),Mus_musculus),((Mastomys_natalensis,Zelotomys_hildegardeae,(Praomys_jacksoni,Praomys_tullbergi)),Hylomyscus_parvus)),Malacomys_longipes))),Batomys_granti),(NCBI_Entire-Group_021,(((Lophuromys_flavopunctatus,NCBI_Entire-Group_017),Acomys_ignitus),Uranomys_ruddi)))))); TREE 'NCBI_Tree3670_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Acomys_ignitus,Aethomys_namaquensis,Apodemus_agrarius,Apodemus_semotus,Apomys_hylocoetes,Archboldomys_luzonensis,Arvicanthis_somalicus,Batomys_granti,Berylmys_bowersii,Chrotomys_gonzalesi,Conilurus_penicillatus,Hylomyscus_parvus,Leggadina_forresti,Lemniscomys_barbarus,Lophuromys_flavopunctatus,Malacomys_longipes,Mastomys_natalensis,Mus_musculus,Parotomys,Praomys_jacksoni,Praomys_tullbergi,Pseudomys_australis,Rattus_exulans,Rattus_norvegicus,Rhabdomys_pumilio,Rhynchomys_isarogensis,Stochomys_longicaudatus,Sundamys_muelleri,Uranomys_ruddi,Uromys_caudimaculatus,Zelotomys_hildegardeae,NCBI_Entire-Group_021,NCBI_Entire-Group_017)))); TREE 'Tree3671_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((((((((Rattus_norvegicus,Rattus_exulans),Sundamys_muelleri),Berylmys_bowersii),(Leopoldamys_sabanus,Niviventer_cremoriventer)),Maxomys_surifer),(Parotomys,((Rhabdomys_pumilio,(Arvicanthis_somalicus,Lemniscomys_barbarus)),(Aethomys_namaquensis,Stochomys_longicaudatus)))),((Apomys_hylocoetes,Rhynchomys_isarogensis),((Conilurus_penicillatus,Leggadina_forresti,Pseudomys_australis),Uromys_caudimaculatus))),(((Apodemus_mystacinus,Apodemus_agrarius),Apodemus_semotus),Malacomys_longipes)),(Mus_musculus,(((Mastomys_hildebranti,Zelotomys_hildegardeae),Praomys_taitae,Hylomyscus_parvus),Praomys_jacksoni,Praomys_tullbergi))),Batomys_granti),(NCBI_Entire-Group_021,(((Acomys_ignitus,Lophuromys_flavopunctatus),NCBI_Entire-Group_017),Uranomys_ruddi)))))); TREE 'NCBI_Tree3671_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Acomys_ignitus,Aethomys_namaquensis,Apodemus_agrarius,Apodemus_mystacinus,Apodemus_semotus,Apomys_hylocoetes,Arvicanthis_somalicus,Batomys_granti,Berylmys_bowersii,Conilurus_penicillatus,Hylomyscus_parvus,Leggadina_forresti,Lemniscomys_barbarus,Leopoldamys_sabanus,Lophuromys_flavopunctatus,Malacomys_longipes,Mastomys_hildebranti,Maxomys_surifer,Mus_musculus,Niviventer_cremoriventer,Parotomys,Praomys_jacksoni,Praomys_taitae,Praomys_tullbergi,Pseudomys_australis,Rattus_exulans,Rattus_norvegicus,Rhabdomys_pumilio,Rhynchomys_isarogensis,Stochomys_longicaudatus,Sundamys_muelleri,Uranomys_ruddi,Uromys_caudimaculatus,Zelotomys_hildegardeae,NCBI_Entire-Group_021,NCBI_Entire-Group_017)))); TREE 'Tree3672_Metazoa' = [&R] ((((((Lophuromys_flavopunctatus,(Uranomys_ruddi,Acomys_ignitus)),(Tatera_robusta,(Taterillus_emini,(Gerbillus,Meriones_shawi)))),(Batomys_granti,((((((Praomys_tullbergi,Praomys_jacksoni),(Zelotomys_hildegardeae,(Praomys_taitae,(Hylomyscus_parvus,Mastomys_hildebranti)))),(Mus_musculus,(Malacomys_longipes,((Apodemus_semotus,Apodemus_agrarius),Apodemus_mystacinus)))),((Pseudomys_australis,(Leggadina_forresti,(Uromys_caudimaculatus,Conilurus_penicillatus))),Rhynchomys_isarogensis)),(Stochomys_longicaudatus,((Aethomys_namaquensis,(Lemniscomys_barbarus,Arvicanthis_somalicus)),Rhabdomys_pumilio),Parotomys)),(Maxomys_surifer,((Niviventer_cremoriventer,Leopoldamys_sabanus),((Berylmys_bowersii,Sundamys_muelleri),(Rattus_exulans,Rattus_norvegicus))))))),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree3672_Metazoa' = [&R] (((((Taterillus_emini,Tatera_robusta,Meriones_shawi,Gerbillus),Zelotomys_hildegardeae,Uromys_caudimaculatus,Uranomys_ruddi,Sundamys_muelleri,Stochomys_longicaudatus,Rhynchomys_isarogensis,Rhabdomys_pumilio,Rattus_norvegicus,Rattus_exulans,Pseudomys_australis,Praomys_tullbergi,Praomys_taitae,Praomys_jacksoni,Parotomys,Niviventer_cremoriventer,Mus_musculus,Maxomys_surifer,Mastomys_hildebranti,Malacomys_longipes,Lophuromys_flavopunctatus,Leopoldamys_sabanus,Lemniscomys_barbarus,Leggadina_forresti,Hylomyscus_parvus,Conilurus_penicillatus,Berylmys_bowersii,Batomys_granti,Arvicanthis_somalicus,Apodemus_semotus,Apodemus_mystacinus,Apodemus_agrarius,Aethomys_namaquensis,Acomys_ignitus),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'Tree3673_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((Rattus_norvegicus,Sundamys_muelleri),Rattus_exulans),(((Apomys_datae,Apomys_hylocoetes),(Chrotomys_gonzalesi,(Archboldomys_luzonensis,Rhynchomys_isarogensis))),(Conilurus_penicillatus,Leggadina_forresti,Pseudomys_australis,Uromys_caudimaculatus)),(Malacomys_longipes,((Apodemus_agrarius,Apodemus_semotus),(Mus_musculus,(Zelotomys_hildegardeae,(Hylomyscus_parvus,(Praomys_jacksoni,Praomys_tullbergi))))))),((((Arvicanthis_somalicus,Lemniscomys_barbarus),Stochomys_longicaudatus),Parotomys,Aethomys_namaquensis),Batomys_granti)),(Uranomys_ruddi,NCBI_Entire-Group_021))))); TREE 'NCBI_Tree3673_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Aethomys_namaquensis,Apodemus_agrarius,Apodemus_semotus,Apomys_datae,Apomys_hylocoetes,Archboldomys_luzonensis,Arvicanthis_somalicus,Batomys_granti,Chrotomys_gonzalesi,Conilurus_penicillatus,Hylomyscus_parvus,Leggadina_forresti,Lemniscomys_barbarus,Malacomys_longipes,Mus_musculus,Parotomys,Praomys_jacksoni,Praomys_tullbergi,Pseudomys_australis,Rattus_exulans,Rattus_norvegicus,Rhynchomys_isarogensis,Stochomys_longicaudatus,Sundamys_muelleri,Uranomys_ruddi,Uromys_caudimaculatus,Zelotomys_hildegardeae,NCBI_Entire-Group_021)))); TREE 'Tree3674_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((NCBI_Entire-Group_021,Uranomys_ruddi),((Batomys_granti,(Aethomys_namaquensis,(Stochomys_longicaudatus,(Arvicanthis_somalicus,Lemniscomys_barbarus)),Parotomys)),(Sundamys_muelleri,((((Rhynchomys_isarogensis,Archboldomys_luzonensis),Chrotomys_gonzalesi),(Apomys_datae,Apomys_hylocoetes)),((Leporillus_conditor,Conilurus_penicillatus),(Leggadina_forresti,Pseudomys_australis),Uromys_caudimaculatus)),((((Mastomys_natalensis,Zelotomys_hildegardeae),Hylomyscus_parvus,(Praomys_jacksoni,Praomys_tullbergi)),(Apodemus_semotus,Apodemus_agrarius)),Malacomys_longipes),MyTree0001_Metazoa-Group_6)))))); TREE 'NCBI_Tree3674_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Aethomys_namaquensis,Apodemus_agrarius,Apodemus_semotus,Apomys_datae,Apomys_hylocoetes,Archboldomys_luzonensis,Arvicanthis_somalicus,Batomys_granti,Chrotomys_gonzalesi,Conilurus_penicillatus,Hylomyscus_parvus,Leggadina_forresti,Lemniscomys_barbarus,Leporillus_conditor,Malacomys_longipes,Mastomys_natalensis,Parotomys,Praomys_jacksoni,Praomys_tullbergi,Pseudomys_australis,Rhynchomys_isarogensis,Stochomys_longicaudatus,Sundamys_muelleri,Uranomys_ruddi,Uromys_caudimaculatus,Zelotomys_hildegardeae,NCBI_Entire-Group_021,MyTree0001_Metazoa-Group_6)))); TREE 'Tree3675_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((((((((Hylomyscus_parvus,Praomys_taitae),Zelotomys_hildegardeae),(Praomys_jacksoni,Praomys_tullbergi)),Mus_musculus),(Apodemus_mystacinus,(Apodemus_agrarius,Apodemus_semotus))),Malacomys_longipes),(Parotomys,(Stochomys_longicaudatus,((Rhabdomys_pumilio,(Arvicanthis_somalicus,Lemniscomys_barbarus)),Aethomys_namaquensis)))),((((Rhynchomys_isarogensis,Chrotomys_gonzalesi),Archboldomys_luzonensis),(Apomys_datae,Apomys_hylocoetes)),(((Uromys_caudimaculatus,Conilurus_penicillatus),Leggadina_forresti),Pseudomys_australis))),(((((Rattus_norvegicus,Rattus_exulans),Sundamys_muelleri),Berylmys_bowersii),(Leopoldamys_sabanus,Niviventer_cremoriventer)),Maxomys_surifer)),Batomys_granti),(NCBI_Entire-Group_021,(Uranomys_ruddi,(Acomys_ignitus,(Lophuromys_flavopunctatus,NCBI_Entire-Group_017)))))))); TREE 'NCBI_Tree3675_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Acomys_ignitus,Aethomys_namaquensis,Apodemus_agrarius,Apodemus_mystacinus,Apodemus_semotus,Apomys_datae,Apomys_hylocoetes,Archboldomys_luzonensis,Arvicanthis_somalicus,Batomys_granti,Berylmys_bowersii,Chrotomys_gonzalesi,Conilurus_penicillatus,Hylomyscus_parvus,Leggadina_forresti,Lemniscomys_barbarus,Leopoldamys_sabanus,Lophuromys_flavopunctatus,Malacomys_longipes,Maxomys_surifer,Mus_musculus,Niviventer_cremoriventer,Parotomys,Praomys_jacksoni,Praomys_taitae,Praomys_tullbergi,Pseudomys_australis,Rattus_exulans,Rattus_norvegicus,Rhabdomys_pumilio,Rhynchomys_isarogensis,Stochomys_longicaudatus,Sundamys_muelleri,Uranomys_ruddi,Uromys_caudimaculatus,Zelotomys_hildegardeae,NCBI_Entire-Group_021,NCBI_Entire-Group_017)))); TREE 'Tree3681_Fungi' = [&R] (((((Sporisorium_polliniae,(Sporisorium_themedae-arguentis,Sporisorium_chrysopogonis),((Sporisorium_formosanum,Sporisorium_destruens),(Sporisorium_cenchri,Sporisorium_ovarium))),(Sporisorium_tumefaciens,(Sporisorium_provinciale,Sporisorium_mishrae,((Sporisorium_scitamineum,(Sporisorium_holwayi,(Sporisorium_sorghi,Sporisorium_moniliferum,Sporisorium_cruentum),(Sporisorium_culmiperdum,((Sporisorium_lepturi,Sporisorium_dimeriae-ornithopodae),(Sporisorium_pseudechinolaenae,(Sporisorium_ophiuri,(Sporisorium_reilianum,Sporisorium_fastigiatum))))),(Sporisorium_occidentale,((Sporisorium_trachypogonicola,Sporisorium_puellare),Sporisorium_paspali-notati)))),((Ustilago_vetiveriae,Ustilago_maydis),((Ustilago_esculenta,Ustilago_echinata),((Ustilago_trichophora,Ustilago_schroeteriana),Sporisorium_aegypticum),(Melanopsichium_pennsylvanicum,((Ustilago_xerochloae,Ustilago_sparsa,Ustilago_cynodontis),((Ustilago_turcomanica,Ustilago_pamirica,Ustilago_bullata),(Ustilago_nuda,Ustilago_hordei,Ustilago_avenae)))),((Ustilago_spermophora,(Sporisorium_veracruzianum,(Ustilago_crameri,Ustilago_affinis))),Moesziomyces_bullatus))))))),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree3681_Fungi' = [&R] ((((Sporisorium_tumefaciens,Ustilago_xerochloae,Ustilago_vetiveriae,Ustilago_sparsa,Ustilago_schroeteriana,Ustilago_pamirica,Ustilago_echinata,Ustilago_crameri,Sporisorium_veracruzianum,Sporisorium_trachypogonicola,Sporisorium_themedae-arguentis,Sporisorium_puellare,Sporisorium_pseudechinolaenae,Sporisorium_provinciale,Sporisorium_polliniae,Sporisorium_occidentale,Sporisorium_mishrae,Sporisorium_paspali-notati,Sporisorium_lepturi,Sporisorium_formosanum,Sporisorium_fastigiatum,Sporisorium_dimeriae-ornithopodae,Sporisorium_chrysopogonis,Sporisorium_aegypticum,Ustilago_turcomanica,Ustilago_esculenta,Sporisorium_cenchri,Sporisorium_moniliferum,Sporisorium_holwayi,Sporisorium_cruentum,Ustilago_avenae,Ustilago_hordei,Ustilago_bullata,Ustilago_affinis,Ustilago_spermophora,Sporisorium_culmiperdum,Ustilago_trichophora,Ustilago_nuda,Sporisorium_ovarium,Sporisorium_ophiuri,Sporisorium_destruens,Sporisorium_reilianum,Ustilago_cynodontis,Sporisorium_sorghi,Moesziomyces_bullatus,Melanopsichium_pennsylvanicum,Sporisorium_scitamineum,Ustilago_maydis),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree3687_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((((Nannospalax_ehrenbergi,((NCBI_Entire-Group_016,NCBI_Entire-Group_018),((Calomyscus,MyTree0001_Metazoa-Group_14),MyTree0001_Metazoa-Group_6))),(MyTree0001_Metazoa-Cavia_porcellus,NCBI_Entire-Group_022)),(Ochotona_princeps,(Lepus_crawshayi,Oryctolagus_cuniculus))),((((((NCBI_Entire-Group_027,NCBI_Entire-Group_028),NCBI_Entire-Group_029),NCBI_Entire-Group_030),NCBI_Entire-Group_026),MyTree0001_Metazoa-Nycticebus_coucang),(Tarsius_bancanus,MyTree0001_Metazoa-Group_7))),(((Canis_lupus,NCBI_Entire-Group_010),(Equus_caballus,NCBI_Entire-Group_023)),(Erinaceus_europaeus,((MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa),NCBI_Entire-Group_008)))),NCBI_Entire-Group_032),((Elephas_maximus,(Procavia_capensis,NCBI_Entire-Group_024)),(Orycteropus_afer,(Amblysomus_hottentotus,Echinops_telfairi)))),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'NCBI_Tree3687_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Elephas_maximus,Orycteropus_afer,Procavia_capensis,(MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa,NCBI_Entire-Group_008),(Amblysomus_hottentotus,Echinops_telfairi,Erinaceus_europaeus),(Tarsius_bancanus,(NCBI_Entire-Group_030,MyTree0001_Metazoa-Nycticebus_coucang,NCBI_Entire-Group_026,NCBI_Entire-Group_027,NCBI_Entire-Group_028,NCBI_Entire-Group_029),MyTree0001_Metazoa-Group_7),(Canis_lupus,NCBI_Entire-Group_010),(Equus_caballus,NCBI_Entire-Group_023),(Ochotona_princeps,(Lepus_crawshayi,Oryctolagus_cuniculus)),((Calomyscus,Nannospalax_ehrenbergi,NCBI_Entire-Group_016,MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6,NCBI_Entire-Group_018),(MyTree0001_Metazoa-Cavia_porcellus,NCBI_Entire-Group_022)),NCBI_Entire-Group_024,NCBI_Entire-Group_032),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'Tree3688_Eukaryota' = [&R] (Archaea,Bacteria,((((((((((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_132),NCBI_Entire-Group_129),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_2)),NCBI_Entire-Group_249),((Mnemiopsis_leidyi,NCBI_Entire-Group_112),(((((MyTree0001_Metazoa-Group_16,NCBI_Entire-Group_100),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),NCBI_Entire-Group_108))),(Entamoeba_histolytica,Mastigamoeba_balamuthi)),(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,NCBI_Entire-Group_258),NCBI_Entire-Group_282),(Guillardia_theta,NCBI_Entire-Group_002))),NCBI_Entire-Group_293),(MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi,NCBI_Entire-Group_291)),(((Prorocentrum_micans,(MyTree0001_Not_Metazoa-Group_18,MyTree0001_Not_Metazoa-Toxoplasma_gondii)),MyTree0001_Not_Metazoa-Group_19),(Achlya_bisexualis,NCBI_Entire-Group_001)))); TREE 'NCBI_Tree3688_Eukaryota' = [&R] ((((MyTree0001_Not_Metazoa-Group_18,MyTree0001_Not_Metazoa-Toxoplasma_gondii),Prorocentrum_micans,MyTree0001_Not_Metazoa-Group_19),((((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_132),NCBI_Entire-Group_129),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_2),MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi,NCBI_Entire-Group_249),((((((MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_100),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi,NCBI_Entire-Group_108),NCBI_Entire-Group_112)),((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,NCBI_Entire-Group_258),NCBI_Entire-Group_282),NCBI_Entire-Group_001,Mastigamoeba_balamuthi,Guillardia_theta,Entamoeba_histolytica,Achlya_bisexualis,NCBI_Entire-Group_002,NCBI_Entire-Group_291,NCBI_Entire-Group_293),Bacteria,Archaea); TREE 'Tree3689_Eukaryota' = [&R] (Archaea,Bacteria,((((((((((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_132),NCBI_Entire-Group_129),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_2)),NCBI_Entire-Group_249),((Mnemiopsis_leidyi,NCBI_Entire-Group_112),(((((MyTree0001_Metazoa-Group_16,NCBI_Entire-Group_100),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Strongylocentrotus_purpuratus),NCBI_Entire-Group_108))),(Entamoeba_histolytica,Mastigamoeba_balamuthi)),(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,NCBI_Entire-Group_258),NCBI_Entire-Group_282),(Guillardia_theta,NCBI_Entire-Group_002))),NCBI_Entire-Group_293),(MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi,NCBI_Entire-Group_291)),(((Prorocentrum_micans,(MyTree0001_Not_Metazoa-Group_18,MyTree0001_Not_Metazoa-Toxoplasma_gondii)),MyTree0001_Not_Metazoa-Group_19),(Achlya_bisexualis,NCBI_Entire-Group_001)))); TREE 'NCBI_Tree3689_Eukaryota' = [&R] ((((MyTree0001_Not_Metazoa-Group_18,MyTree0001_Not_Metazoa-Toxoplasma_gondii),Prorocentrum_micans,MyTree0001_Not_Metazoa-Group_19),((((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_132),NCBI_Entire-Group_129),(MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_2),MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi,NCBI_Entire-Group_249),((((((MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_100),MyTree0001_Metazoa-Group_1),MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_16),Mnemiopsis_leidyi,NCBI_Entire-Group_108),NCBI_Entire-Group_112)),((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,NCBI_Entire-Group_258),NCBI_Entire-Group_282),NCBI_Entire-Group_001,Mastigamoeba_balamuthi,Guillardia_theta,Entamoeba_histolytica,Achlya_bisexualis,NCBI_Entire-Group_002,NCBI_Entire-Group_291,NCBI_Entire-Group_293),Bacteria,Archaea); TREE 'Tree3690_Eukaryota' = [&R] (Archaea,Bacteria,((((((((((((((((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_204),MyTree0001_Not_Metazoa-Group_10),Schizosaccharomyces_pombe),(MyTree0001_Not_Metazoa-Cryptococcus_neoformans,NCBI_Entire-Group_137)),NCBI_Entire-Group_121),NCBI_Entire-Group_253),NCBI_Entire-Group_120),Metazoa),NCBI_Entire-Group_001),Hartmannella_vermiformis),((((((Ginkgo_biloba,NCBI_Entire-Group_259),NCBI_Entire-Group_258),NCBI_Entire-Group_256),(NCBI_Entire-Group_279,NCBI_Entire-Group_282)),NCBI_Entire-Group_257),(Guillardia_theta,NCBI_Entire-Group_002))),(Rhodella_maculata,NCBI_Entire-Group_293)),(((((MyTree0001_Not_Metazoa-Group_16,MyTree0001_Not_Metazoa-Toxoplasma_gondii),MyTree0001_Not_Metazoa-Group_18),Prorocentrum_micans),(MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_006)),(Achlya_bisexualis,NCBI_Entire-Group_003))),NCBI_Entire-Group_291),(Ameson_michaelis,MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi)),((Tritrichomonas_foetus,NCBI_Entire-Group_288),NCBI_Entire-Group_287))); TREE 'NCBI_Tree3690_Eukaryota' = [&R] (((Tritrichomonas_foetus,NCBI_Entire-Group_288),(Achlya_bisexualis,NCBI_Entire-Group_003),((MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_006),((MyTree0001_Not_Metazoa-Group_18,MyTree0001_Not_Metazoa-Toxoplasma_gondii),MyTree0001_Not_Metazoa-Group_16),Prorocentrum_micans),(Metazoa,((Ameson_michaelis,MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi),(MyTree0001_Not_Metazoa-Cryptococcus_neoformans,NCBI_Entire-Group_137),(MyTree0001_Not_Metazoa-Group_10,(MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_204),Schizosaccharomyces_pombe),NCBI_Entire-Group_121,NCBI_Entire-Group_253),NCBI_Entire-Group_120),((NCBI_Entire-Group_279,NCBI_Entire-Group_282),(((Ginkgo_biloba,NCBI_Entire-Group_259),NCBI_Entire-Group_258),NCBI_Entire-Group_256,NCBI_Entire-Group_257)),NCBI_Entire-Group_291,(Rhodella_maculata,NCBI_Entire-Group_293),NCBI_Entire-Group_001,Hartmannella_vermiformis,Guillardia_theta,NCBI_Entire-Group_002,NCBI_Entire-Group_287),Bacteria,Archaea); TREE 'Tree3691_Eukaryota' = [&R] (Archaea,Bacteria,((((((((((((((((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_204),MyTree0001_Not_Metazoa-Group_10),Schizosaccharomyces_pombe),(MyTree0001_Not_Metazoa-Cryptococcus_neoformans,NCBI_Entire-Group_137)),NCBI_Entire-Group_121),NCBI_Entire-Group_253),NCBI_Entire-Group_120),Metazoa),NCBI_Entire-Group_001),Hartmannella_vermiformis),((((((Ginkgo_biloba,NCBI_Entire-Group_259),NCBI_Entire-Group_258),NCBI_Entire-Group_256),(NCBI_Entire-Group_279,NCBI_Entire-Group_282)),NCBI_Entire-Group_257),(Guillardia_theta,NCBI_Entire-Group_002))),(Rhodella_maculata,NCBI_Entire-Group_293)),(((((MyTree0001_Not_Metazoa-Group_16,MyTree0001_Not_Metazoa-Toxoplasma_gondii),MyTree0001_Not_Metazoa-Group_18),Prorocentrum_micans),(MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_006)),(Achlya_bisexualis,NCBI_Entire-Group_003))),NCBI_Entire-Group_291),(Ameson_michaelis,MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi)),((Tritrichomonas_foetus,NCBI_Entire-Group_288),NCBI_Entire-Group_287))); TREE 'NCBI_Tree3691_Eukaryota' = [&R] (((Tritrichomonas_foetus,NCBI_Entire-Group_288),(Achlya_bisexualis,NCBI_Entire-Group_003),((MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_006),((MyTree0001_Not_Metazoa-Group_18,MyTree0001_Not_Metazoa-Toxoplasma_gondii),MyTree0001_Not_Metazoa-Group_16),Prorocentrum_micans),(Metazoa,((Ameson_michaelis,MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi),(MyTree0001_Not_Metazoa-Cryptococcus_neoformans,NCBI_Entire-Group_137),(MyTree0001_Not_Metazoa-Group_10,(MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_204),Schizosaccharomyces_pombe),NCBI_Entire-Group_121,NCBI_Entire-Group_253),NCBI_Entire-Group_120),((NCBI_Entire-Group_279,NCBI_Entire-Group_282),(((Ginkgo_biloba,NCBI_Entire-Group_259),NCBI_Entire-Group_258),NCBI_Entire-Group_256,NCBI_Entire-Group_257)),NCBI_Entire-Group_291,(Rhodella_maculata,NCBI_Entire-Group_293),NCBI_Entire-Group_001,Hartmannella_vermiformis,Guillardia_theta,NCBI_Entire-Group_002,NCBI_Entire-Group_287),Bacteria,Archaea); TREE 'Tree3692_Eukaryota' = [&R] (Archaea,Bacteria,((((((((((((((((MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_204),MyTree0001_Not_Metazoa-Group_10),Schizosaccharomyces_pombe),(MyTree0001_Not_Metazoa-Cryptococcus_neoformans,NCBI_Entire-Group_137)),NCBI_Entire-Group_121),NCBI_Entire-Group_253),NCBI_Entire-Group_120),Metazoa),NCBI_Entire-Group_001),Hartmannella_vermiformis),((((((Ginkgo_biloba,NCBI_Entire-Group_259),NCBI_Entire-Group_258),NCBI_Entire-Group_256),(NCBI_Entire-Group_279,NCBI_Entire-Group_282)),NCBI_Entire-Group_257),(Guillardia_theta,NCBI_Entire-Group_002))),(Rhodella_maculata,NCBI_Entire-Group_293)),(((((MyTree0001_Not_Metazoa-Group_16,MyTree0001_Not_Metazoa-Toxoplasma_gondii),MyTree0001_Not_Metazoa-Group_18),Prorocentrum_micans),(MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_006)),(Achlya_bisexualis,NCBI_Entire-Group_003))),NCBI_Entire-Group_291),(Ameson_michaelis,MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi)),((Tritrichomonas_foetus,NCBI_Entire-Group_288),NCBI_Entire-Group_287))); TREE 'NCBI_Tree3692_Eukaryota' = [&R] (((Tritrichomonas_foetus,NCBI_Entire-Group_288),(Achlya_bisexualis,NCBI_Entire-Group_003),((MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_006),((MyTree0001_Not_Metazoa-Group_18,MyTree0001_Not_Metazoa-Toxoplasma_gondii),MyTree0001_Not_Metazoa-Group_16),Prorocentrum_micans),(Metazoa,((Ameson_michaelis,MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi),(MyTree0001_Not_Metazoa-Cryptococcus_neoformans,NCBI_Entire-Group_137),(MyTree0001_Not_Metazoa-Group_10,(MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_204),Schizosaccharomyces_pombe),NCBI_Entire-Group_121,NCBI_Entire-Group_253),NCBI_Entire-Group_120),((NCBI_Entire-Group_279,NCBI_Entire-Group_282),(((Ginkgo_biloba,NCBI_Entire-Group_259),NCBI_Entire-Group_258),NCBI_Entire-Group_256,NCBI_Entire-Group_257)),NCBI_Entire-Group_291,(Rhodella_maculata,NCBI_Entire-Group_293),NCBI_Entire-Group_001,Hartmannella_vermiformis,Guillardia_theta,NCBI_Entire-Group_002,NCBI_Entire-Group_287),Bacteria,Archaea); TREE 'Tree3696_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Chloroscypha,((((((Scleromitrula_shiraiana,(Monilinia_laxa,(Sclerotinia_sclerotiorum,Ciboria))),NCBI_Entire-Group_190),NCBI_Entire-Group_192),((NCBI_Entire-Group_186,NCBI_Entire-Group_187),((Microglossum,NCBI_Entire-Group_189),((((NCBI_Entire-Group_222,(MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_157)),(Trichoglossum_hirsutum,Geoglossum_glabrum)),(NCBI_Entire-Group_163,NCBI_Entire-Group_243)),NCBI_Entire-Group_188)))),(Hymenoscyphus_fructigenus,(Mitrula,NCBI_Entire-Group_193))),Bisporella_citrina)),Ascocoryne_sarcoides),Ascocoryne_cylichnium)))); TREE 'NCBI_Tree3696_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((NCBI_Entire-Group_186,NCBI_Entire-Group_187),((Ciboria,Mitrula,Monilinia_laxa,Scleromitrula_shiraiana,Sclerotinia_sclerotiorum),(Geoglossum_glabrum,Microglossum,Trichoglossum_hirsutum),NCBI_Entire-Group_193,(Ascocoryne_cylichnium,Ascocoryne_sarcoides,Bisporella_citrina,Chloroscypha,Hymenoscyphus_fructigenus),NCBI_Entire-Group_188,NCBI_Entire-Group_189,NCBI_Entire-Group_190,NCBI_Entire-Group_192)),NCBI_Entire-Group_163),NCBI_Entire-Group_222,NCBI_Entire-Group_157),MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_243)))); TREE 'Tree3751_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Annulatascus_biatriisporus,(Cyanoannulus_petersenii,(MyTree0001_Not_Metazoa-Magnaporthe_grisea,((NCBI_Entire-Group_168,Clohiesia_corticola),(MyTree0001_Not_Metazoa-Group_1,((Neurospora_crassa,Sordaria_fimicola),NCBI_Entire-Group_173)))))),(((((((Annulatascus_velatisporus,Annulatascus_hongkongensis),Submersisphaeria_aquatica),Pseudoproboscispora),(Annulatascus_triseptatus,Ascolacicola_austriaca)),((Ophiostoma_africanum,(((Ambrosiella_macrospora,Ophiostoma_piliferum),Ophiostoma_floccosum),Ophiostoma_piceae)),Fragosphaeria_purpurea)),((Aquaticola_hongkongensis,Aquaticola_ellipsoidea),NCBI_Entire-Group_174)),(Cryptadelphia_groenendalensis,Cryptadelphia_polyseptata))),(((Diaporthe_pustulata,Cryphonectria_havanensis),(Valsella_salicis,Leucostoma_auerswaldii)),(((Microascus_trigonosporus,(Ophiodeira_monosemeia,(Halosarpheia_fibrosa,Lignincola_laevis))),Nectria_cinnabarina),NCBI_Entire-Group_184))),(NCBI_Entire-Group_164,NCBI_Entire-Group_162)),(NCBI_Entire-Group_163,NCBI_Entire-Group_212),MyTree0001_Not_Metazoa-Group_10)))); TREE 'NCBI_Tree3751_Fungi' = [&R] ((((((NCBI_Entire-Group_164,NCBI_Entire-Group_162,NCBI_Entire-Group_163),(((NCBI_Entire-Group_168,(Ambrosiella_macrospora,Microascus_trigonosporus),(Ophiostoma_africanum,Ophiostoma_floccosum,Fragosphaeria_purpurea,Ophiostoma_piceae,Ophiostoma_piliferum)),(Ascolacicola_austriaca,(Cyanoannulus_petersenii,Aquaticola_ellipsoidea,Annulatascus_triseptatus,Annulatascus_biatriisporus,Submersisphaeria_aquatica,Pseudoproboscispora,Clohiesia_corticola,Aquaticola_hongkongensis,Annulatascus_velatisporus,Annulatascus_hongkongensis),MyTree0001_Not_Metazoa-Group_1,(Sordaria_fimicola,Neurospora_crassa),NCBI_Entire-Group_173),((Valsella_salicis,Leucostoma_auerswaldii,Diaporthe_pustulata,Cryphonectria_havanensis),NCBI_Entire-Group_174)),(Halosarpheia_fibrosa,Ophiodeira_monosemeia,Lignincola_laevis),((Cryptadelphia_groenendalensis,Cryptadelphia_polyseptata,Nectria_cinnabarina),NCBI_Entire-Group_184)),MyTree0001_Not_Metazoa-Magnaporthe_grisea,NCBI_Entire-Group_212),MyTree0001_Not_Metazoa-Group_10),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree3783_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Sauromalus_obesus,(((Basiliscus_vittatus,Basiliscus_plumifrons),Basiliscus_galeritus),(Laemanctus_longipes,(Corytophanes_cristatus,Corytophanes_percarinatus)))),NCBI_Entire-Group_048),Polychrus_acutirostris),NCBI_Entire-Group_042)))); TREE 'NCBI_Tree3783_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Polychrus_acutirostris,Sauromalus_obesus,(Basiliscus_galeritus,Basiliscus_plumifrons,Basiliscus_vittatus,Corytophanes_cristatus,Corytophanes_percarinatus,Laemanctus_longipes),NCBI_Entire-Group_048),NCBI_Entire-Group_042)))); TREE 'Tree3787_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Sauromalus_obesus,(((Basiliscus_vittatus,Basiliscus_plumifrons),Basiliscus_galeritus),(Laemanctus_longipes,(Corytophanes_cristatus,Corytophanes_percarinatus)))),NCBI_Entire-Group_048),Polychrus_acutirostris),NCBI_Entire-Group_042)))); TREE 'NCBI_Tree3787_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Polychrus_acutirostris,Sauromalus_obesus,(Basiliscus_galeritus,Basiliscus_plumifrons,Basiliscus_vittatus,Corytophanes_cristatus,Corytophanes_percarinatus,Laemanctus_longipes),NCBI_Entire-Group_048),NCBI_Entire-Group_042)))); TREE 'Tree3788_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Sauromalus_obesus,NCBI_Entire-Group_046),NCBI_Entire-Group_048),Polychrus_acutirostris),NCBI_Entire-Group_042)))); TREE 'NCBI_Tree3788_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Polychrus_acutirostris,Sauromalus_obesus,NCBI_Entire-Group_046,NCBI_Entire-Group_048),NCBI_Entire-Group_042)))); TREE 'Tree3789_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Sauromalus_obesus,NCBI_Entire-Group_046),NCBI_Entire-Group_048),Polychrus_acutirostris),NCBI_Entire-Group_042)))); TREE 'NCBI_Tree3789_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Polychrus_acutirostris,Sauromalus_obesus,NCBI_Entire-Group_046,NCBI_Entire-Group_048),NCBI_Entire-Group_042)))); TREE 'Tree3823_Eukaryota' = [&R] (((((((((MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_12),MyTree0001_Metazoa-Group_6),Viridiplantae),(NCBI_Entire-Group_080,NCBI_Entire-Group_099)),MyTree0001_Not_Metazoa-Group_19),(NCBI_Entire-Group_102,NCBI_Entire-Group_105)),(Ascaris_lumbricoides,Riftia_pachyptila)),Archaea,Bacteria); TREE 'NCBI_Tree3823_Eukaryota' = [&R] ((Viridiplantae,(Ascaris_lumbricoides,(((Riftia_pachyptila,NCBI_Entire-Group_080),NCBI_Entire-Group_099,NCBI_Entire-Group_102),(MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7)),NCBI_Entire-Group_105),MyTree0001_Not_Metazoa-Group_19),Bacteria,Archaea); TREE 'Tree3823_Not_Eukaryota' = [&R] (((((((NCBI_Entire-Group_318,NCBI_Entire-Group_331),NCBI_Entire-Group_315),NCBI_Entire-Group_306),NCBI_Entire-Group_339),(NCBI_Entire-Group_310,NCBI_Entire-Group_298)),Eukaryota),(((NCBI_Entire-Group_299,NCBI_Entire-Group_300),NCBI_Entire-Group_305),Aeropyrum_pernix)); TREE 'NCBI_Tree3823_Not_Eukaryota' = [&R] ((((NCBI_Entire-Group_315,NCBI_Entire-Group_318),NCBI_Entire-Group_331),(NCBI_Entire-Group_310,NCBI_Entire-Group_305,NCBI_Entire-Group_306),NCBI_Entire-Group_300,NCBI_Entire-Group_339),((NCBI_Entire-Group_298,NCBI_Entire-Group_299),Aeropyrum_pernix),Eukaryota); TREE 'Tree3826_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((NCBI_Entire-Group_165,NCBI_Entire-Group_195),((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),MyTree0001_Not_Metazoa-Group_4)),(MyTree0001_Not_Metazoa-Group_5,(NCBI_Entire-Group_209,NCBI_Entire-Group_212))),((((NCBI_Entire-Group_218,NCBI_Entire-Group_219),NCBI_Entire-Group_217),NCBI_Entire-Group_216),NCBI_Entire-Group_222)),((Pichia_angusta,Pichia_anomala,Pichia_pastoris),(Kluyveromyces_lactis,(Saccharomyces_kluyveri,Saccharomyces_cerevisiae)))),MyTree0001_Not_Metazoa-Group_6)))); TREE 'NCBI_Tree3826_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((NCBI_Entire-Group_216,NCBI_Entire-Group_217,NCBI_Entire-Group_218,NCBI_Entire-Group_219,NCBI_Entire-Group_222),(((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),MyTree0001_Not_Metazoa-Group_4),(NCBI_Entire-Group_209,NCBI_Entire-Group_212),NCBI_Entire-Group_165,NCBI_Entire-Group_195),MyTree0001_Not_Metazoa-Group_5),(Kluyveromyces_lactis,Pichia_angusta,Pichia_anomala,Pichia_pastoris,Saccharomyces_cerevisiae,Saccharomyces_kluyveri),MyTree0001_Not_Metazoa-Group_6)))); TREE 'Tree3846_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Protodriloides,(NCBI_Entire-Group_070,NCBI_Entire-Group_071),(Sabella_pavonina,NCBI_Entire-Group_072),(Ophelia_rathkei,NCBI_Entire-Group_082),NCBI_Entire-Group_079,NCBI_Entire-Group_081,(Hrabeiella_periglandulata,Terebratalia_transversa),NCBI_Entire-Group_073,NCBI_Entire-Group_074,NCBI_Entire-Group_077,NCBI_Entire-Group_078)))); TREE 'NCBI_Tree3846_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Terebratalia_transversa,(((Ophelia_rathkei,NCBI_Entire-Group_081,NCBI_Entire-Group_082),((NCBI_Entire-Group_079,NCBI_Entire-Group_078,NCBI_Entire-Group_077),(Sabella_pavonina,Protodriloides)),Hrabeiella_periglandulata,NCBI_Entire-Group_074),((NCBI_Entire-Group_072,NCBI_Entire-Group_073),(NCBI_Entire-Group_070,NCBI_Entire-Group_071))))))); TREE 'Tree3848_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((NCBI_Entire-Group_070,NCBI_Entire-Group_071),((Ophelia_rathkei,NCBI_Entire-Group_074,(Terebratalia_transversa,(Hrabeiella_periglandulata,NCBI_Entire-Group_072)),(Protodriloides,(NCBI_Entire-Group_078,NCBI_Entire-Group_079),NCBI_Entire-Group_082),NCBI_Entire-Group_077),(Sabella_pavonina,NCBI_Entire-Group_081)),NCBI_Entire-Group_073)))); TREE 'NCBI_Tree3848_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Terebratalia_transversa,(((Ophelia_rathkei,NCBI_Entire-Group_081,NCBI_Entire-Group_082),((NCBI_Entire-Group_079,NCBI_Entire-Group_078,NCBI_Entire-Group_077),(Sabella_pavonina,Protodriloides)),Hrabeiella_periglandulata,NCBI_Entire-Group_074),((NCBI_Entire-Group_072,NCBI_Entire-Group_073),(NCBI_Entire-Group_070,NCBI_Entire-Group_071))))))); TREE 'Tree3849_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Terebratalia_transversa,(NCBI_Entire-Group_073,NCBI_Entire-Group_076),NCBI_Entire-Group_068,NCBI_Entire-Group_100)))); TREE 'NCBI_Tree3849_Metazoa' = [&R] ((((((NCBI_Entire-Group_073,NCBI_Entire-Group_076),NCBI_Entire-Group_068),Terebratalia_transversa,NCBI_Entire-Group_100),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'Tree3996_Bacteria' = [&R] (Archaea,Eukaryota,((Gloeobacter_violaceus,(((((NCBI_Entire-Group_320,NCBI_Entire-Group_305),NCBI_Entire-Group_310),(((Thermotoga_maritima,NCBI_Entire-Group_303),Chlorobium_tepidum),NCBI_Entire-Group_311)),((((NCBI_Entire-Group_315,NCBI_Entire-Group_318),NCBI_Entire-Group_331),(NCBI_Entire-Group_322,NCBI_Entire-Group_323)),Leptospira_interrogans)),NCBI_Entire-Group_309)),Synechocystis)); TREE 'NCBI_Tree3996_Bacteria' = [&R] (Eukaryota,(Chlorobium_tepidum,(Synechocystis,Gloeobacter_violaceus),(((NCBI_Entire-Group_322,NCBI_Entire-Group_323),NCBI_Entire-Group_320),(NCBI_Entire-Group_315,NCBI_Entire-Group_318),NCBI_Entire-Group_311,NCBI_Entire-Group_331),((NCBI_Entire-Group_309,NCBI_Entire-Group_310),NCBI_Entire-Group_305),Thermotoga_maritima,Leptospira_interrogans,NCBI_Entire-Group_303),Archaea); TREE 'Tree3997_Bacteria' = [&R] (Archaea,Eukaryota,((NCBI_Entire-Group_320,NCBI_Entire-Group_311),((((((NCBI_Entire-Group_319,NCBI_Entire-Group_323),((NCBI_Entire-Group_318,NCBI_Entire-Group_315),NCBI_Entire-Group_331)),NCBI_Entire-Group_312),NCBI_Entire-Group_305),((((Leptospira_interrogans,NCBI_Entire-Group_302),(NCBI_Entire-Group_301,NCBI_Entire-Group_309)),NCBI_Entire-Group_339),(NCBI_Entire-Group_303,NCBI_Entire-Group_304)),NCBI_Entire-Group_300),NCBI_Entire-Group_310))); TREE 'NCBI_Tree3997_Bacteria' = [&R] (Eukaryota,(NCBI_Entire-Group_339,(NCBI_Entire-Group_331,(NCBI_Entire-Group_320,NCBI_Entire-Group_319,NCBI_Entire-Group_323),(NCBI_Entire-Group_318,NCBI_Entire-Group_315),(NCBI_Entire-Group_311,NCBI_Entire-Group_312)),((NCBI_Entire-Group_309,NCBI_Entire-Group_310),NCBI_Entire-Group_305),(Leptospira_interrogans,NCBI_Entire-Group_302),NCBI_Entire-Group_300,NCBI_Entire-Group_301,NCBI_Entire-Group_303,NCBI_Entire-Group_304),Archaea); TREE 'Tree3998_Bacteria' = [&R] (Archaea,Eukaryota,(((((((((Prochlorococcus_marinus,NCBI_Entire-Group_336),(((NCBI_Entire-Group_300,NCBI_Entire-Group_309),NCBI_Entire-Group_320),((NCBI_Entire-Group_308,NCBI_Entire-Group_306),NCBI_Entire-Group_301))),NCBI_Entire-Group_319),Helicobacter_pylori),NCBI_Entire-Group_330),((Burkholderia_fungorum,Cupriavidus_metallidurans),NCBI_Entire-Group_314)),(NCBI_Entire-Group_331,(NCBI_Entire-Group_329,NCBI_Entire-Group_332))),(Pseudomonas_aeruginosa,Pseudomonas_cepacia,Pseudomonas_pseudomallei,Pseudomonas_syringae)),NCBI_Entire-Group_317)); TREE 'NCBI_Tree3998_Bacteria' = [&R] (Eukaryota,((Prochlorococcus_marinus,NCBI_Entire-Group_336),((NCBI_Entire-Group_331,NCBI_Entire-Group_329,NCBI_Entire-Group_330,NCBI_Entire-Group_332),(NCBI_Entire-Group_319,NCBI_Entire-Group_320),(((Pseudomonas_aeruginosa,Pseudomonas_cepacia,Pseudomonas_syringae,Pseudomonas_pseudomallei,Cupriavidus_metallidurans,Burkholderia_fungorum),NCBI_Entire-Group_317),NCBI_Entire-Group_314),Helicobacter_pylori),(NCBI_Entire-Group_308,NCBI_Entire-Group_306,NCBI_Entire-Group_309),NCBI_Entire-Group_300,NCBI_Entire-Group_301),Archaea); TREE 'Tree3999_Eukaryota' = [&R] (Archaea,Bacteria,(Mastigamoeba_balamuthi,(((((Monosiga_brevicollis,((MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_087),(MyTree0001_Metazoa-Group_2,MyTree0001_Metazoa-Group_5))),(((Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_10),MyTree0001_Not_Metazoa-Group_2),MyTree0001_Not_Metazoa-Cryptococcus_neoformans)),(((Euglena_gracilis,MyTree0001_Not_Metazoa-Group_15),((Guillardia_theta,(NCBI_Entire-Group_292,NCBI_Entire-Group_293)),((Chlorella_kessleri,NCBI_Entire-Group_282),MyTree0001_Not_Metazoa-Group_13))),(((Stentor_coeruleus,(MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_006)),(MyTree0001_Not_Metazoa-Group_18,MyTree0001_Not_Metazoa-Group_17)),(NCBI_Entire-Group_003,(Giardia_lamblia,NCBI_Entire-Group_289))))),MyTree0001_Not_Metazoa-Dictyostelium_discoideum),Entamoeba_histolytica))); TREE 'NCBI_Tree3999_Eukaryota' = [&R] (((Euglena_gracilis,MyTree0001_Not_Metazoa-Group_15),NCBI_Entire-Group_003,((Stentor_coeruleus,MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_006),(MyTree0001_Not_Metazoa-Group_17,MyTree0001_Not_Metazoa-Group_18)),(((MyTree0001_Not_Metazoa-Group_10,Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_2),MyTree0001_Not_Metazoa-Cryptococcus_neoformans),(MyTree0001_Metazoa-Group_2,((MyTree0001_Metazoa-Group_0,NCBI_Entire-Group_087),MyTree0001_Metazoa-Group_5)),Monosiga_brevicollis),((Chlorella_kessleri,NCBI_Entire-Group_282),MyTree0001_Not_Metazoa-Group_13),(NCBI_Entire-Group_292,NCBI_Entire-Group_293),Mastigamoeba_balamuthi,Guillardia_theta,Giardia_lamblia,Entamoeba_histolytica,MyTree0001_Not_Metazoa-Dictyostelium_discoideum,NCBI_Entire-Group_289),Bacteria,Archaea); TREE 'Tree4000_Bacteria' = [&R] (Archaea,Eukaryota,((((((NCBI_Entire-Group_323,NCBI_Entire-Group_319),Caulobacter_crescentus),(((Cupriavidus_metallidurans,NCBI_Entire-Group_314),NCBI_Entire-Group_313),((((((NCBI_Entire-Group_329,NCBI_Entire-Group_328),((Buchnera_aphidicola,Yersinia_pestis),Escherichia_coli)),NCBI_Entire-Group_332),((Pseudomonas_syringae,Pseudomonas_pseudomallei,Pseudomonas_cepacia,Pseudomonas_aeruginosa),NCBI_Entire-Group_317)),NCBI_Entire-Group_327),NCBI_Entire-Group_330))),NCBI_Entire-Group_312),NCBI_Entire-Group_311),Helicobacter_pylori)); TREE 'NCBI_Tree4000_Bacteria' = [&R] (Eukaryota,(((Buchnera_aphidicola,Escherichia_coli,Yersinia_pestis),NCBI_Entire-Group_330,NCBI_Entire-Group_329,NCBI_Entire-Group_328,NCBI_Entire-Group_327,NCBI_Entire-Group_332),(NCBI_Entire-Group_323,Caulobacter_crescentus,NCBI_Entire-Group_319),(((Pseudomonas_aeruginosa,Pseudomonas_cepacia,Pseudomonas_syringae,Pseudomonas_pseudomallei,Cupriavidus_metallidurans),NCBI_Entire-Group_317),NCBI_Entire-Group_313,NCBI_Entire-Group_314),((Helicobacter_pylori,NCBI_Entire-Group_311),NCBI_Entire-Group_312)),Archaea); TREE 'Tree4001_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((((((((Bos_taurus,MyTree0001_Metazoa-Group_10),MyTree0001_Metazoa-Sus_scrofa),NCBI_Entire-Group_008),NCBI_Entire-Group_031),((Manis,NCBI_Entire-Group_010),(Equus_asinus,Equus_caballus))),NCBI_Entire-Group_011),(((((NCBI_Entire-Group_027,NCBI_Entire-Group_029),NCBI_Entire-Group_030),MyTree0001_Metazoa-Nycticebus_coucang),(Tarsius_bancanus,(MyTree0001_Metazoa-Group_9,((Hylobates_lar,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_8)))),(Tupaia_glis,(((Lepus_crawshayi,Oryctolagus_cuniculus),Ochotona_princeps),(((Aplodontia_rufa,NCBI_Entire-Group_014),Dryomys_nitedula),((MyTree0001_Metazoa-Group_6,NCBI_Entire-Group_015),(Cavia_porcellus,(Chinchilla_lanigera,(Octodon_lunatus,NCBI_Entire-Group_022))))))))),NCBI_Entire-Group_032),(((Procavia_capensis,NCBI_Entire-Group_024),(Elephas_maximus,Loxodonta_africana)),Orycteropus_afer)),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'NCBI_Tree4001_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((Manis,Orycteropus_afer,Procavia_capensis,Tupaia_glis,(Bos_taurus,MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa,NCBI_Entire-Group_008),(Tarsius_bancanus,(MyTree0001_Metazoa-Nycticebus_coucang,NCBI_Entire-Group_027,NCBI_Entire-Group_029,NCBI_Entire-Group_030),MyTree0001_Metazoa-Group_9,(Hylobates_lar,MyTree0001_Metazoa-Group_7,MyTree0001_Metazoa-Group_8)),(Elephas_maximus,Loxodonta_africana),(Equus_asinus,Equus_caballus),(Ochotona_princeps,(Lepus_crawshayi,Oryctolagus_cuniculus)),((Cavia_porcellus,Chinchilla_lanigera,Octodon_lunatus,NCBI_Entire-Group_022),(Aplodontia_rufa,Dryomys_nitedula,(MyTree0001_Metazoa-Group_6,NCBI_Entire-Group_015),NCBI_Entire-Group_014)),NCBI_Entire-Group_010,NCBI_Entire-Group_011,NCBI_Entire-Group_024,NCBI_Entire-Group_031,NCBI_Entire-Group_032),MyTree0001_Metazoa-Didelphis_marsupialis)))); TREE 'Tree4032_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Schizosaccharomyces_pombe,((NCBI_Entire-Group_220,NCBI_Entire-Group_217),((NCBI_Entire-Group_189,((((NCBI_Entire-Group_188,NCBI_Entire-Group_196),(NCBI_Entire-Group_195,((NCBI_Entire-Group_244,NCBI_Entire-Group_165),Cyttaria_darwinii))),((((MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),(Humicola_insolens,MyTree0001_Not_Metazoa-Group_1)),(((MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),(NCBI_Entire-Group_167,NCBI_Entire-Group_169))),NCBI_Entire-Group_164)),NCBI_Entire-Group_186)),(((Coccodinium_bartschii,NCBI_Entire-Group_205),(NCBI_Entire-Group_207,NCBI_Entire-Group_213)),(((Thermoascus_aurantiacus,(Thermomyces_lanuginosus,((Eupenicillium_javanicum,(Emericella_nidulans,NCBI_Entire-Group_238)),Talaromyces_emersonii))),NCBI_Entire-Group_241),NCBI_Entire-Group_234)))),(Zygosaccharomyces_bailii,(Saccharomyces_cerevisiae,Saccharomyces_kluyveri)))))); TREE 'NCBI_Tree4032_Fungi' = [&R] (((((((NCBI_Entire-Group_165,NCBI_Entire-Group_164),(((NCBI_Entire-Group_167,NCBI_Entire-Group_169),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173)),(MyTree0001_Not_Metazoa-Group_4,MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_182)),(Cyttaria_darwinii,(NCBI_Entire-Group_189,NCBI_Entire-Group_195,NCBI_Entire-Group_188,NCBI_Entire-Group_196),NCBI_Entire-Group_186),(Coccodinium_bartschii,((NCBI_Entire-Group_205,NCBI_Entire-Group_207),NCBI_Entire-Group_213))),(NCBI_Entire-Group_220,NCBI_Entire-Group_217),((Emericella_nidulans,Talaromyces_emersonii,Eupenicillium_javanicum,Thermoascus_aurantiacus),NCBI_Entire-Group_238),NCBI_Entire-Group_234,NCBI_Entire-Group_241),NCBI_Entire-Group_244,Humicola_insolens,Thermomyces_lanuginosus,Schizosaccharomyces_pombe,(Zygosaccharomyces_bailii,Saccharomyces_kluyveri,Saccharomyces_cerevisiae)),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree4050_Eukaryota' = [&R] (Archaea,Bacteria,(Babesia_bovis,(MyTree0001_Not_Metazoa-Group_17,((Cryptosporidium_serpentis,(Cryptosporidium_muris,Cryptosporidium_andersoni)),(Cryptosporidium_baileyi,(Cryptosporidium_saurophilum,(Cryptosporidium_felis,Cryptosporidium_parvum))))),MyTree0001_Not_Metazoa-Toxoplasma_gondii)); TREE 'NCBI_Tree4050_Eukaryota' = [&R] (Archaea,Bacteria,((Cryptosporidium_saurophilum,Cryptosporidium_andersoni,Cryptosporidium_serpentis,Cryptosporidium_felis,Cryptosporidium_baileyi,Cryptosporidium_muris,Cryptosporidium_parvum,MyTree0001_Not_Metazoa-Toxoplasma_gondii),Babesia_bovis,MyTree0001_Not_Metazoa-Group_17)); TREE 'Tree4090.1_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((MyTree0001_Metazoa-Group_0,MyTree0001_Metazoa-Group_1),(MyTree0001_Metazoa-Group_7,NCBI_Entire-Group_066)),((NCBI_Entire-Group_076,NCBI_Entire-Group_101),(MyTree0001_Metazoa-Strongylocentrotus_purpuratus,(Branchiostoma_floridae,Saccoglossus_kowalevskii)),NCBI_Entire-Group_109))))); TREE 'NCBI_Tree4090.1_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_101),(MyTree0001_Metazoa-Group_0,MyTree0001_Metazoa-Group_1),NCBI_Entire-Group_076),(Saccoglossus_kowalevskii,(Branchiostoma_floridae,MyTree0001_Metazoa-Group_7,NCBI_Entire-Group_066))),NCBI_Entire-Group_109)))); TREE 'Tree4090.2_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((MyTree0001_Metazoa-Group_7,NCBI_Entire-Group_066),MyTree0001_Metazoa-Group_0),(((NCBI_Entire-Group_076,NCBI_Entire-Group_101),MyTree0001_Metazoa-Group_1),(MyTree0001_Metazoa-Strongylocentrotus_purpuratus,(Branchiostoma_floridae,Saccoglossus_kowalevskii)),NCBI_Entire-Group_109))))); TREE 'NCBI_Tree4090.2_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((MyTree0001_Metazoa-Strongylocentrotus_purpuratus,NCBI_Entire-Group_101),(MyTree0001_Metazoa-Group_0,MyTree0001_Metazoa-Group_1),NCBI_Entire-Group_076),(Saccoglossus_kowalevskii,(Branchiostoma_floridae,MyTree0001_Metazoa-Group_7,NCBI_Entire-Group_066))),NCBI_Entire-Group_109)))); TREE 'Tree4098_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((((Aniptodera_chesapeakensis,(Halosphaeria_appendiculata,Lignincola_laevis)),NCBI_Entire-Group_169),(((Neocosmospora_vasinfecta,NCBI_Entire-Group_182),(Nectria_cinnabarina,MyTree0001_Not_Metazoa-Group_3)),NCBI_Entire-Group_184)),MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),((((((Gaeumannomyces_graminis,Magnaporthe_salvinii),Magnaporthe_grisea),((Ceratosphaeria_lampadophora,Ophioceras_tenuisporum),Pseudohalonectria_lignicola)),((((Chaetomium_thermophilum,Chaetomium_gracile,Chaetomium_globosum),((Neurospora_crassa,Sordaria_fimicola),NCBI_Entire-Group_173)),Farrowia_longicollea),NCBI_Entire-Group_166)),((Cryphonectria_havanensis,(NCBI_Entire-Group_175,NCBI_Entire-Group_176)),(Diaporthe_phaseolorum,Valsella_salicis))),(((Diatrype_disciformis,(NCBI_Entire-Group_161,NCBI_Entire-Group_162)),(Graphostroma_platystoma,NCBI_Entire-Group_164)),(((NCBI_Entire-Group_163,NCBI_Entire-Group_212),NCBI_Entire-Group_186),NCBI_Entire-Group_214)))),Ascolacicola_austriaca),Fragosphaeria_purpurea),Ophiostoma_piliferum),(Ophiostoma_floccosum,Ophiostoma_piceae))))); TREE 'NCBI_Tree4098_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Ceratosphaeria_lampadophora,((Cryphonectria_havanensis,Diaporthe_phaseolorum,Valsella_salicis),NCBI_Entire-Group_175,NCBI_Entire-Group_176),(Ascolacicola_austriaca,(Chaetomium_globosum,Chaetomium_gracile,Chaetomium_thermophilum,Farrowia_longicollea),(Neurospora_crassa,Sordaria_fimicola),NCBI_Entire-Group_173),((Fragosphaeria_purpurea,Ophiostoma_floccosum,Ophiostoma_piceae,Ophiostoma_piliferum),NCBI_Entire-Group_169),NCBI_Entire-Group_166),(Aniptodera_chesapeakensis,Halosphaeria_appendiculata,Lignincola_laevis),((Nectria_cinnabarina,Neocosmospora_vasinfecta),(MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_184),(MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_182))),(Diatrype_disciformis,Graphostroma_platystoma,NCBI_Entire-Group_161,NCBI_Entire-Group_162,NCBI_Entire-Group_163,NCBI_Entire-Group_164),(Gaeumannomyces_graminis,Magnaporthe_grisea,Magnaporthe_salvinii,Ophioceras_tenuisporum,Pseudohalonectria_lignicola),NCBI_Entire-Group_186,NCBI_Entire-Group_212,NCBI_Entire-Group_214)))); TREE 'Tree4099_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Halosphaeria_appendiculata,(Corollospora_maritima,(NCBI_Entire-Group_169,(((((((NCBI_Entire-Group_163,NCBI_Entire-Group_186),NCBI_Entire-Group_214),((Graphostroma_platystoma,NCBI_Entire-Group_164),Diatrype_disciformis)),((((Farrowia_longicollea,(Chaetomium_globosum,Chaetomium_gracile,Chaetomium_thermophilum)),((Lasiosphaeria_ovina,MyTree0001_Not_Metazoa-Group_2),Cercophora_septentrionalis)),NCBI_Entire-Group_166),((((Ophiostoma_piliferum,Ophiostoma_piceae),Fragosphaeria_purpurea),((Valsa_ambiens,(NCBI_Entire-Group_175,NCBI_Entire-Group_176)),Diaporthe_phaseolorum)),(Pseudohalonectria_lignicola,((Ophioceras_tenuisporum,(Ophioceras_leptosporum,Ophioceras_commune)),(Magnaporthe_grisea,((Gaeumannomyces_graminis,Gaeumannomyces_amomi),(Magnaporthe_salvinii,(Gaeumannomyces_cylindrosporus,Buergenerula_spartinae))))))))),((MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_184),(MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182))),MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),NCBI_Entire-Group_167)))),Aniptodera_chesapeakensis)))); TREE 'NCBI_Tree4099_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Diaporthe_phaseolorum,Valsa_ambiens),NCBI_Entire-Group_175,NCBI_Entire-Group_176),((Chaetomium_globosum,Chaetomium_gracile,Chaetomium_thermophilum,Farrowia_longicollea),(Cercophora_septentrionalis,Lasiosphaeria_ovina),MyTree0001_Not_Metazoa-Group_2),((Fragosphaeria_purpurea,Ophiostoma_piceae,Ophiostoma_piliferum),NCBI_Entire-Group_169,NCBI_Entire-Group_167),NCBI_Entire-Group_166),(Aniptodera_chesapeakensis,Corollospora_maritima,Halosphaeria_appendiculata),((MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_184),(MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_4)),(Diatrype_disciformis,Graphostroma_platystoma,NCBI_Entire-Group_163,NCBI_Entire-Group_164),(Buergenerula_spartinae,Gaeumannomyces_amomi,Gaeumannomyces_cylindrosporus,Gaeumannomyces_graminis,Magnaporthe_grisea,Magnaporthe_salvinii,Ophioceras_commune,Ophioceras_leptosporum,Ophioceras_tenuisporum,Pseudohalonectria_lignicola),NCBI_Entire-Group_186,NCBI_Entire-Group_214)))); TREE 'Tree4100_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Halosphaeria_appendiculata,(((((NCBI_Entire-Group_214,(((NCBI_Entire-Group_218,NCBI_Entire-Group_220),(NCBI_Entire-Group_163,NCBI_Entire-Group_186)),(((Graphostroma_platystoma,NCBI_Entire-Group_161),(Diatrype_disciformis,NCBI_Entire-Group_164)),(((((Lasiosphaeria_ovina,(Farrowia_longicollea,(Chaetomium_globosum,Chaetomium_gracile,Chaetomium_thermophilum))),Cercophora_septentrionalis),MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_166),((NCBI_Entire-Group_170,((Valsa_ambiens,(NCBI_Entire-Group_175,NCBI_Entire-Group_176)),Diaporthe_phaseolorum)),(Pseudohalonectria_lignicola,(Magnaporthe_grisea,(Ophioceras_tenuisporum,(Gaeumannomyces_graminis,Magnaporthe_salvinii))))))))),(((Cordyceps_ophioglossoides,MyTree0001_Not_Metazoa-Group_5),Claviceps_paspali),((MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_3))),MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),NCBI_Entire-Group_167),NCBI_Entire-Group_169)),Aniptodera_chesapeakensis)))); TREE 'NCBI_Tree4100_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((NCBI_Entire-Group_218,NCBI_Entire-Group_220),(NCBI_Entire-Group_214,((((Diaporthe_phaseolorum,Valsa_ambiens),NCBI_Entire-Group_175,NCBI_Entire-Group_176),((Chaetomium_globosum,Chaetomium_gracile,Chaetomium_thermophilum,Farrowia_longicollea),(Cercophora_septentrionalis,Lasiosphaeria_ovina),MyTree0001_Not_Metazoa-Group_2),(NCBI_Entire-Group_170,NCBI_Entire-Group_167,NCBI_Entire-Group_169),NCBI_Entire-Group_166),(Aniptodera_chesapeakensis,Halosphaeria_appendiculata),((Claviceps_paspali,Cordyceps_ophioglossoides,MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),(MyTree0001_Not_Metazoa-Group_3,NCBI_Entire-Group_182),MyTree0001_Not_Metazoa-Group_4)),(Diatrype_disciformis,Graphostroma_platystoma,NCBI_Entire-Group_161,NCBI_Entire-Group_163,NCBI_Entire-Group_164),(Gaeumannomyces_graminis,Magnaporthe_grisea,Magnaporthe_salvinii,Ophioceras_tenuisporum,Pseudohalonectria_lignicola),NCBI_Entire-Group_186),MyTree0001_Not_Metazoa-Group_5)))); TREE 'Tree4110_Archaea' = [&R] (Bacteria,(Eukaryota,(((MyTree0000-Group_0,NCBI_Entire-Group_296),MyTree0000-Group_2),((MyTree0000-Group_1,Aeropyrum_pernix),NCBI_Entire-Group_294)))); TREE 'NCBI_Tree4110_Archaea' = [&R] (Eukaryota,Bacteria,((MyTree0000-Group_0,MyTree0000-Group_2,NCBI_Entire-Group_296),(MyTree0000-Group_1,Aeropyrum_pernix,NCBI_Entire-Group_294))); TREE 'Tree4110_Metazoa' = [&R] (Bacteria,(((NCBI_Entire-Group_109,(((Botryllus,Oikopleura_dioica,NCBI_Entire-Group_059,NCBI_Entire-Group_060,NCBI_Entire-Group_061,NCBI_Entire-Group_062,NCBI_Entire-Group_063,NCBI_Entire-Group_064,NCBI_Entire-Group_065,NCBI_Entire-Group_066),(Aotus_trivirgatus,Bos_taurus,Hylobates_lar,Ochotona_princeps,Odocoileus_virginianus,Pongo_pygmaeus,Sminthopsis_douglasi,Tapirus_pinchaque,Tarsius_bancanus,Tragulus_napu,MyTree0001_Metazoa-Cavia_porcellus,MyTree0001_Metazoa-Didelphis_marsupialis,MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7,MyTree0001_Metazoa-Group_8,MyTree0001_Metazoa-Group_9,MyTree0001_Metazoa-Nycticebus_coucang,MyTree0001_Metazoa-Sus_scrofa,NCBI_Entire-Group_007,NCBI_Entire-Group_008,NCBI_Entire-Group_009,NCBI_Entire-Group_010,NCBI_Entire-Group_011,NCBI_Entire-Group_012,NCBI_Entire-Group_013,NCBI_Entire-Group_014,NCBI_Entire-Group_015,NCBI_Entire-Group_016,NCBI_Entire-Group_017,NCBI_Entire-Group_018,NCBI_Entire-Group_019,NCBI_Entire-Group_020,NCBI_Entire-Group_021,NCBI_Entire-Group_022,NCBI_Entire-Group_023,NCBI_Entire-Group_024,NCBI_Entire-Group_025,NCBI_Entire-Group_026,NCBI_Entire-Group_027,NCBI_Entire-Group_028,NCBI_Entire-Group_029,NCBI_Entire-Group_030,NCBI_Entire-Group_031,NCBI_Entire-Group_032)),MyTree0001_Metazoa-Group_3)),Viridiplantae,Fungi),Archaea)); TREE 'NCBI_Tree4110_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_3,(((Sminthopsis_douglasi,MyTree0001_Metazoa-Didelphis_marsupialis),(NCBI_Entire-Group_011,(NCBI_Entire-Group_010,NCBI_Entire-Group_009),(MyTree0001_Metazoa-Group_10,NCBI_Entire-Group_008,(Tragulus_napu,(Odocoileus_virginianus,(Bos_taurus,MyTree0001_Metazoa-Group_11))),MyTree0001_Metazoa-Sus_scrofa),NCBI_Entire-Group_032,NCBI_Entire-Group_031,(Tarsius_bancanus,(NCBI_Entire-Group_029,NCBI_Entire-Group_028,NCBI_Entire-Group_027,NCBI_Entire-Group_030,MyTree0001_Metazoa-Nycticebus_coucang,NCBI_Entire-Group_026),(Aotus_trivirgatus,MyTree0001_Metazoa-Group_9),(Hylobates_lar,(MyTree0001_Metazoa-Group_8,NCBI_Entire-Group_025),(Pongo_pygmaeus,MyTree0001_Metazoa-Group_7))),NCBI_Entire-Group_024,(Tapirus_pinchaque,NCBI_Entire-Group_023),Ochotona_princeps,((NCBI_Entire-Group_022,MyTree0001_Metazoa-Cavia_porcellus),((NCBI_Entire-Group_021,NCBI_Entire-Group_020,NCBI_Entire-Group_019,NCBI_Entire-Group_018,NCBI_Entire-Group_017,NCBI_Entire-Group_016,MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6,NCBI_Entire-Group_015),(NCBI_Entire-Group_013,NCBI_Entire-Group_014),NCBI_Entire-Group_012)),MyTree0001_Metazoa-Group_12,NCBI_Entire-Group_007)),(Oikopleura_dioica,NCBI_Entire-Group_059,((NCBI_Entire-Group_065,NCBI_Entire-Group_066,NCBI_Entire-Group_063,NCBI_Entire-Group_064),(Botryllus,NCBI_Entire-Group_060,NCBI_Entire-Group_062,NCBI_Entire-Group_061))))),NCBI_Entire-Group_109)))); TREE 'Tree4110_Not_Metazoa_Viridiplantae' = [&R] (Archaea,Bacteria,(((Stentor_coeruleus,Uronema_acuminata,MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_005,NCBI_Entire-Group_006),((Cryptosporidium_parvum,Cryptosporidium_hominis),((Eimeria_tenella,MyTree0001_Not_Metazoa-Toxoplasma_gondii),(MyTree0001_Not_Metazoa-Group_17,(MyTree0001_Not_Metazoa-Group_16,Babesia_bovis))))),((NCBI_Entire-Group_004,NCBI_Entire-Group_003),(((MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica),((Monosiga_brevicollis,Metazoa),((NCBI_Entire-Group_253,NCBI_Entire-Group_254),(((MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Ustilago_maydis),(Schizosaccharomyces_pombe,((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_2))),MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi)))),(((Rhodella_maculata,NCBI_Entire-Group_292,NCBI_Entire-Group_293),NCBI_Entire-Group_121),Viridiplantae))))); TREE 'NCBI_Tree4110_Not_Metazoa_Viridiplantae' = [&R] ((((NCBI_Entire-Group_293,Rhodella_maculata),NCBI_Entire-Group_292),(((NCBI_Entire-Group_254,NCBI_Entire-Group_253),((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_2),(MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Ustilago_maydis),MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi,NCBI_Entire-Group_121),Monosiga_brevicollis,Metazoa),((MyTree0001_Not_Metazoa-Group_17,(Babesia_bovis,MyTree0001_Not_Metazoa-Group_16),(Eimeria_tenella,Cryptosporidium_parvum,Cryptosporidium_hominis,MyTree0001_Not_Metazoa-Toxoplasma_gondii)),(Stentor_coeruleus,(Uronema_acuminata,MyTree0001_Not_Metazoa-Group_19),(NCBI_Entire-Group_006,NCBI_Entire-Group_005))),(NCBI_Entire-Group_004,NCBI_Entire-Group_003),Viridiplantae,MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica),Bacteria,Archaea); TREE 'Tree4110_Viridiplantae' = [&R] (Bacteria,((Metazoa,(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_13),NCBI_Entire-Group_258),NCBI_Entire-Group_282),Fungi),Archaea)); TREE 'NCBI_Tree4110_Viridiplantae' = [&R] (Archaea,Bacteria,((Fungi,Metazoa),(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_13),NCBI_Entire-Group_258),NCBI_Entire-Group_282))); TREE 'Tree4112_Archaea' = [&R] (Bacteria,(Eukaryota,(((MyTree0000-Group_0,NCBI_Entire-Group_296),MyTree0000-Group_2),((MyTree0000-Group_1,Aeropyrum_pernix),NCBI_Entire-Group_294)))); TREE 'NCBI_Tree4112_Archaea' = [&R] (Eukaryota,Bacteria,((MyTree0000-Group_0,MyTree0000-Group_2,NCBI_Entire-Group_296),(MyTree0000-Group_1,Aeropyrum_pernix,NCBI_Entire-Group_294))); TREE 'Tree4112_Metazoa' = [&R] (Bacteria,((((NCBI_Entire-Group_109,(((Botryllus,Oikopleura_dioica,NCBI_Entire-Group_059,NCBI_Entire-Group_060,NCBI_Entire-Group_061,NCBI_Entire-Group_062,NCBI_Entire-Group_063,NCBI_Entire-Group_064,NCBI_Entire-Group_065,NCBI_Entire-Group_066),(Aotus_trivirgatus,Bos_taurus,Hylobates_lar,Ochotona_princeps,Odocoileus_virginianus,Pongo_pygmaeus,Sminthopsis_douglasi,Tapirus_pinchaque,Tarsius_bancanus,Tragulus_napu,MyTree0001_Metazoa-Cavia_porcellus,MyTree0001_Metazoa-Didelphis_marsupialis,MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Group_11,MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7,MyTree0001_Metazoa-Group_8,MyTree0001_Metazoa-Group_9,MyTree0001_Metazoa-Nycticebus_coucang,MyTree0001_Metazoa-Sus_scrofa,NCBI_Entire-Group_007,NCBI_Entire-Group_008,NCBI_Entire-Group_009,NCBI_Entire-Group_010,NCBI_Entire-Group_011,NCBI_Entire-Group_012,NCBI_Entire-Group_013,NCBI_Entire-Group_014,NCBI_Entire-Group_015,NCBI_Entire-Group_016,NCBI_Entire-Group_017,NCBI_Entire-Group_018,NCBI_Entire-Group_019,NCBI_Entire-Group_020,NCBI_Entire-Group_021,NCBI_Entire-Group_022,NCBI_Entire-Group_023,NCBI_Entire-Group_024,NCBI_Entire-Group_025,NCBI_Entire-Group_026,NCBI_Entire-Group_027,NCBI_Entire-Group_028,NCBI_Entire-Group_029,NCBI_Entire-Group_030,NCBI_Entire-Group_031,NCBI_Entire-Group_032)),MyTree0001_Metazoa-Group_3)),Fungi),Viridiplantae),Archaea)); TREE 'NCBI_Tree4112_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((MyTree0001_Metazoa-Group_3,(((Sminthopsis_douglasi,MyTree0001_Metazoa-Didelphis_marsupialis),(NCBI_Entire-Group_011,(NCBI_Entire-Group_010,NCBI_Entire-Group_009),(MyTree0001_Metazoa-Group_10,NCBI_Entire-Group_008,(Tragulus_napu,(Odocoileus_virginianus,(Bos_taurus,MyTree0001_Metazoa-Group_11))),MyTree0001_Metazoa-Sus_scrofa),NCBI_Entire-Group_032,NCBI_Entire-Group_031,(Tarsius_bancanus,(NCBI_Entire-Group_029,NCBI_Entire-Group_028,NCBI_Entire-Group_027,NCBI_Entire-Group_030,MyTree0001_Metazoa-Nycticebus_coucang,NCBI_Entire-Group_026),(Aotus_trivirgatus,MyTree0001_Metazoa-Group_9),(Hylobates_lar,(MyTree0001_Metazoa-Group_8,NCBI_Entire-Group_025),(Pongo_pygmaeus,MyTree0001_Metazoa-Group_7))),NCBI_Entire-Group_024,(Tapirus_pinchaque,NCBI_Entire-Group_023),Ochotona_princeps,((NCBI_Entire-Group_022,MyTree0001_Metazoa-Cavia_porcellus),((NCBI_Entire-Group_021,NCBI_Entire-Group_020,NCBI_Entire-Group_019,NCBI_Entire-Group_018,NCBI_Entire-Group_017,NCBI_Entire-Group_016,MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6,NCBI_Entire-Group_015),(NCBI_Entire-Group_013,NCBI_Entire-Group_014),NCBI_Entire-Group_012)),MyTree0001_Metazoa-Group_12,NCBI_Entire-Group_007)),(Oikopleura_dioica,NCBI_Entire-Group_059,((NCBI_Entire-Group_065,NCBI_Entire-Group_066,NCBI_Entire-Group_063,NCBI_Entire-Group_064),(Botryllus,NCBI_Entire-Group_060,NCBI_Entire-Group_062,NCBI_Entire-Group_061))))),NCBI_Entire-Group_109)))); TREE 'Tree4112_Not_Metazoa_Viridiplantae' = [&R] (Archaea,Bacteria,(((Stentor_coeruleus,Uronema_acuminata,MyTree0001_Not_Metazoa-Group_19,NCBI_Entire-Group_005,NCBI_Entire-Group_006),((Cryptosporidium_parvum,Cryptosporidium_hominis),((Eimeria_tenella,MyTree0001_Not_Metazoa-Toxoplasma_gondii),(MyTree0001_Not_Metazoa-Group_17,(MyTree0001_Not_Metazoa-Group_16,Babesia_bovis))))),((NCBI_Entire-Group_004,NCBI_Entire-Group_003),(((MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica),((Monosiga_brevicollis,Metazoa),((((NCBI_Entire-Group_253,NCBI_Entire-Group_254),NCBI_Entire-Group_121),((MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Ustilago_maydis),(Schizosaccharomyces_pombe,((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_2)))),MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi))),((Rhodella_maculata,NCBI_Entire-Group_292,NCBI_Entire-Group_293),Viridiplantae))))); TREE 'NCBI_Tree4112_Not_Metazoa_Viridiplantae' = [&R] ((((NCBI_Entire-Group_293,Rhodella_maculata),NCBI_Entire-Group_292),(((NCBI_Entire-Group_254,NCBI_Entire-Group_253),((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_2),(MyTree0001_Not_Metazoa-Cryptococcus_neoformans,MyTree0001_Not_Metazoa-Ustilago_maydis),MyTree0001_Not_Metazoa-Encephalitozoon_cuniculi,NCBI_Entire-Group_121),Monosiga_brevicollis,Metazoa),((MyTree0001_Not_Metazoa-Group_17,(Babesia_bovis,MyTree0001_Not_Metazoa-Group_16),(Eimeria_tenella,Cryptosporidium_parvum,Cryptosporidium_hominis,MyTree0001_Not_Metazoa-Toxoplasma_gondii)),(Stentor_coeruleus,(Uronema_acuminata,MyTree0001_Not_Metazoa-Group_19),(NCBI_Entire-Group_006,NCBI_Entire-Group_005))),(NCBI_Entire-Group_004,NCBI_Entire-Group_003),Viridiplantae,MyTree0001_Not_Metazoa-Dictyostelium_discoideum,MyTree0001_Not_Metazoa-Entamoeba_histolytica),Bacteria,Archaea); TREE 'Tree4112_Viridiplantae' = [&R] (Bacteria,(((Metazoa,Fungi),(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_13),NCBI_Entire-Group_258),NCBI_Entire-Group_282)),Archaea)); TREE 'NCBI_Tree4112_Viridiplantae' = [&R] (Archaea,Bacteria,((Fungi,Metazoa),(((MyTree0001_Not_Metazoa-Arabidopsis_thaliana,MyTree0001_Not_Metazoa-Group_13),NCBI_Entire-Group_258),NCBI_Entire-Group_282))); TREE 'Tree4128_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((NCBI_Entire-Group_059,((NCBI_Entire-Group_065,NCBI_Entire-Group_066),NCBI_Entire-Group_064,NCBI_Entire-Group_063)),(((Botryllus,NCBI_Entire-Group_062),NCBI_Entire-Group_061),NCBI_Entire-Group_060)),Oikopleura_dioica),Branchiostoma_floridae,((((MyTree0001_Metazoa-Group_7,NCBI_Entire-Group_034),NCBI_Entire-Group_055),Galeocerdo_cuvier),MyTree0001_Metazoa-Group_4))))); TREE 'NCBI_Tree4128_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(Branchiostoma_floridae,(Oikopleura_dioica,NCBI_Entire-Group_059,((NCBI_Entire-Group_065,NCBI_Entire-Group_064,NCBI_Entire-Group_066,NCBI_Entire-Group_063),(Botryllus,NCBI_Entire-Group_060,NCBI_Entire-Group_062,NCBI_Entire-Group_061))),((Galeocerdo_cuvier,((MyTree0001_Metazoa-Group_7,NCBI_Entire-Group_034),NCBI_Entire-Group_055)),MyTree0001_Metazoa-Group_4))))); TREE 'Tree4199_Eukaryota' = [&R] (Archaea,Bacteria,(((Holomastigotoides_mirabile,(((Tetratrichomonas_gallinarum,Trichomonas_vaginalis),Trichomitus_batrachorum),(Devescovina,Tritrichomonas_foetus),NCBI_Entire-Group_290)),((((Viridiplantae,(MyTree0001_Not_Metazoa-Entamoeba_histolytica,MyTree0001_Not_Metazoa-Group_15)),MyTree0001_Not_Metazoa-Toxoplasma_gondii),NCBI_Entire-Group_287),(Metazoa,Fungi))),NCBI_Entire-Group_288)); TREE 'NCBI_Tree4199_Eukaryota' = [&R] ((((NCBI_Entire-Group_288,Holomastigotoides_mirabile),(((Trichomonas_vaginalis,Trichomitus_batrachorum,Tetratrichomonas_gallinarum),Tritrichomonas_foetus),NCBI_Entire-Group_290,Devescovina)),(Metazoa,Fungi),Viridiplantae,MyTree0001_Not_Metazoa-Entamoeba_histolytica,MyTree0001_Not_Metazoa-Group_15,MyTree0001_Not_Metazoa-Toxoplasma_gondii,NCBI_Entire-Group_287),Bacteria,Archaea); TREE 'Tree4207_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Aphysiostroma_stercorarium,(Hypomyces_polyporinus,Sphaerostilbella_berkeleyana)),(Hypocrea_lutea,MyTree0001_Not_Metazoa-Group_3)),((Cordyceps_gunnii,(Cordyceps_heteropoda,(Cordyceps_capitata,Cordyceps_ophioglossoides))),((Balansia_henningsiana,Myriogenospora_atramentosa),(Claviceps_purpurea,Acremonium_lolii)))),(((Pseudonectria_rousseliana,(Leuconectria_clusiae,Viridispora_diparietispora)),((Nectria_cinnabarina,Cosmospora_coccinea),(Nectria_haematococca,Ophionectria_trichospora))),(Nectriopsis_violacea,(Ochronectria_calami,Hydropisphaera_peziza),(Bionectria_ochroleuca,(Stephanonectria_keithii,Bionectria_pityrodes))))),(((Myrothecium_leucotrichum,Myrothecium_verrucaria),(Myrothecium_cinctum,(Myrothecium_roridum,Myrothecium_inundatum))),(Melanopsamma_pomiformis,(Stachybotrys_subsimplex,(Stachybotrys_echinata,Stachybotrys_chartarum))))),(MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_185))))); TREE 'NCBI_Tree4207_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((Hydropisphaera_peziza,Myrothecium_cinctum,Myrothecium_inundatum,Myrothecium_leucotrichum,Myrothecium_roridum,Myrothecium_verrucaria,Ochronectria_calami,(Aphysiostroma_stercorarium,Bionectria_ochroleuca,Bionectria_pityrodes,Hypocrea_lutea,Hypomyces_polyporinus,Nectriopsis_violacea,Sphaerostilbella_berkeleyana,MyTree0001_Not_Metazoa-Group_3)),(Cosmospora_coccinea,Leuconectria_clusiae,Nectria_cinnabarina,Nectria_haematococca,Ophionectria_trichospora,Pseudonectria_rousseliana,Stephanonectria_keithii,Viridispora_diparietispora),(Acremonium_lolii,Balansia_henningsiana,Claviceps_purpurea,Cordyceps_capitata,Cordyceps_gunnii,Cordyceps_heteropoda,Cordyceps_ophioglossoides,Myriogenospora_atramentosa,(MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina,NCBI_Entire-Group_185)),(Melanopsamma_pomiformis,Stachybotrys_chartarum,Stachybotrys_echinata,Stachybotrys_subsimplex))))); TREE 'Tree4208_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((((((Hypomyces_polyporinus,(Sphaerostilbella_aureonitens,(Aphysiostroma_stercorarium,MyTree0001_Not_Metazoa-Group_3))),(Nectria_cinnabarina,(Nectria_haematococca,(Leuconectria_clusiae,Viridispora_diparietispora))),((Claviceps_paspali,Balansia_sclerotica),(Cordyceps_ophioglossoides,MyTree0001_Not_Metazoa-Group_5)),((Ochronectria_calami,(Nectriopsis_violacea,(Bionectria_ochroleuca,Bionectria_pityrodes))),(NCBI_Entire-Group_183,(Myrothecium_roridum,Myrothecium_inundatum)))),(((NCBI_Entire-Group_169,((Halosphaeria_appendiculata,Aniptodera_chesapeakensis),Halosphaeriopsis_mediosetigera)),NCBI_Entire-Group_167),MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina)),NCBI_Entire-Group_180),NCBI_Entire-Group_214),(((Xylaria_hypoxylon,Xylaria_curta),(Daldinia_concentrica,NCBI_Entire-Group_160)),(((NCBI_Entire-Group_175,NCBI_Entire-Group_176),NCBI_Entire-Group_178),(((MyTree0001_Not_Metazoa-Group_1,NCBI_Entire-Group_173),MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_170)))),NCBI_Entire-Group_222),((NCBI_Entire-Group_217,NCBI_Entire-Group_220),NCBI_Entire-Group_219)),NCBI_Entire-Group_218)))); TREE 'NCBI_Tree4208_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((NCBI_Entire-Group_217,NCBI_Entire-Group_218,NCBI_Entire-Group_219,NCBI_Entire-Group_220,NCBI_Entire-Group_222),((((NCBI_Entire-Group_175,NCBI_Entire-Group_176,NCBI_Entire-Group_178),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_173),(NCBI_Entire-Group_170,NCBI_Entire-Group_169,NCBI_Entire-Group_167)),(Aniptodera_chesapeakensis,Halosphaeria_appendiculata,Halosphaeriopsis_mediosetigera),((Myrothecium_inundatum,Myrothecium_roridum,Ochronectria_calami,(Aphysiostroma_stercorarium,Bionectria_ochroleuca,Bionectria_pityrodes,Hypomyces_polyporinus,Nectriopsis_violacea,Sphaerostilbella_aureonitens,MyTree0001_Not_Metazoa-Group_3)),(Leuconectria_clusiae,Nectria_cinnabarina,Nectria_haematococca,Viridispora_diparietispora),(Balansia_sclerotica,Claviceps_paspali,Cordyceps_ophioglossoides,MyTree0001_Not_Metazoa-Plectosphaerella_cucumerina),NCBI_Entire-Group_183,NCBI_Entire-Group_180)),((Daldinia_concentrica,Xylaria_curta,Xylaria_hypoxylon),NCBI_Entire-Group_160),NCBI_Entire-Group_214),MyTree0001_Not_Metazoa-Group_5)))); TREE 'Tree4224_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Curvularia_oryzae,(Pleospora_herbarum,(((Setomelanomma_holmii,(Phaeosphaeria_avenaria,Phaeosphaeria_vagans)),NCBI_Entire-Group_207),(NCBI_Entire-Group_200,(((NCBI_Entire-Group_208,((((NCBI_Entire-Group_162,NCBI_Entire-Group_164),(((Spathularia_flavida,(Cudonia_circinans,Cudonia_lutea)),NCBI_Entire-Group_191),NCBI_Entire-Group_187)),NCBI_Entire-Group_223),(Exophiala_dermatitidis,((Capronia_coronata,Capronia_parasitica),MyTree0001_Not_Metazoa-Group_6)))),(Dothidea_sambuci,(Dothidea_ribesia,Stylodothis_puccinioides))),(NCBI_Entire-Group_209,(NCBI_Entire-Group_210,NCBI_Entire-Group_211))),NCBI_Entire-Group_206))),(Cochliobolus_heterostrophus,Setosphaeria_monoceras))))); TREE 'NCBI_Tree4224_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Cudonia_circinans,Cudonia_lutea,Spathularia_flavida),NCBI_Entire-Group_187),NCBI_Entire-Group_191),((Dothidea_ribesia,Dothidea_sambuci,Stylodothis_puccinioides),NCBI_Entire-Group_162,NCBI_Entire-Group_164),((NCBI_Entire-Group_206,NCBI_Entire-Group_208,NCBI_Entire-Group_207),(Cochliobolus_heterostrophus,Curvularia_oryzae,Pleospora_herbarum,Setosphaeria_monoceras),(Phaeosphaeria_avenaria,Phaeosphaeria_vagans,Setomelanomma_holmii),NCBI_Entire-Group_209,NCBI_Entire-Group_200,NCBI_Entire-Group_210,NCBI_Entire-Group_211)),(Capronia_coronata,Capronia_parasitica,Exophiala_dermatitidis),NCBI_Entire-Group_223),MyTree0001_Not_Metazoa-Group_6)))); TREE 'Tree4290_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Botryosphaeria_obtusa,Botryosphaeria_corticola,Botryosphaeria_stevensii,Diplodia_pinea,Botryosphaeria_tsugae,(Botryosphaeria_rhodina,NCBI_Entire-Group_161)),(Botryosphaeria_dothidea,NCBI_Entire-Group_122),Botryosphaeria_mamane),((Guignardia_bidwellii,Guignardia_philoprina),Guignardia_citricarpa)),((NCBI_Entire-Group_210,NCBI_Entire-Group_206),NCBI_Entire-Group_200)),((Stenocarpella_maydis,(Diaporthe_angelicae,(Diaporthe_eres,Diaporthe_decedens),Phomopsis_sclerotioides)),Diaporthe_pustulata)),MyTree0001_Not_Metazoa-Magnaporthe_grisea)))); TREE 'NCBI_Tree4290_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Diaporthe_angelicae,Diaporthe_decedens,Diaporthe_eres,Diaporthe_pustulata,Phomopsis_sclerotioides),MyTree0001_Not_Metazoa-Magnaporthe_grisea,(((Guignardia_bidwellii,Guignardia_citricarpa,Guignardia_philoprina),(Botryosphaeria_corticola,Botryosphaeria_dothidea,Botryosphaeria_mamane,Botryosphaeria_obtusa,Botryosphaeria_rhodina,Botryosphaeria_stevensii,Botryosphaeria_tsugae,Diplodia_pinea,Stenocarpella_maydis),NCBI_Entire-Group_206),NCBI_Entire-Group_210,NCBI_Entire-Group_200),NCBI_Entire-Group_161),NCBI_Entire-Group_122)))); TREE 'Tree4334_Eukaryota' = [&R] (Archaea,Bacteria,((((NCBI_Entire-Group_117,NCBI_Entire-Group_116),NCBI_Entire-Group_115),((NCBI_Entire-Group_113,NCBI_Entire-Group_114,NCBI_Entire-Group_111),NCBI_Entire-Group_112)),(NCBI_Entire-Group_106,NCBI_Entire-Group_107),((Suberites_ficus,NCBI_Entire-Group_118),NCBI_Entire-Group_110),Fungi)); TREE 'NCBI_Tree4334_Eukaryota' = [&R] ((Fungi,((NCBI_Entire-Group_106,NCBI_Entire-Group_107),((Suberites_ficus,NCBI_Entire-Group_118),(((NCBI_Entire-Group_114,NCBI_Entire-Group_113,NCBI_Entire-Group_112),NCBI_Entire-Group_111),(NCBI_Entire-Group_116,NCBI_Entire-Group_117,NCBI_Entire-Group_115)),NCBI_Entire-Group_110))),Bacteria,Archaea); TREE 'Tree4335_Eukaryota' = [&R] (Archaea,Bacteria,(((((((Paraleucilla,(Anamixilla_torresi,Sycon_raphanus),NCBI_Entire-Group_114),NCBI_Entire-Group_111),(NCBI_Entire-Group_113,Scypha_ciliata)),Leucosolenia),((NCBI_Entire-Group_117,NCBI_Entire-Group_116),NCBI_Entire-Group_115)),((Suberites_ficus,NCBI_Entire-Group_118),NCBI_Entire-Group_110)),(NCBI_Entire-Group_106,NCBI_Entire-Group_107),Fungi)); TREE 'NCBI_Tree4335_Eukaryota' = [&R] ((Fungi,((NCBI_Entire-Group_106,NCBI_Entire-Group_107),((Suberites_ficus,NCBI_Entire-Group_118),(((NCBI_Entire-Group_114,NCBI_Entire-Group_113,Sycon_raphanus,Scypha_ciliata,Paraleucilla,Leucosolenia,Anamixilla_torresi),NCBI_Entire-Group_111),(NCBI_Entire-Group_116,NCBI_Entire-Group_117,NCBI_Entire-Group_115)),NCBI_Entire-Group_110))),Bacteria,Archaea); TREE 'Tree4336_Eukaryota' = [&R] (Archaea,Bacteria,(Fungi,((NCBI_Entire-Group_116,NCBI_Entire-Group_115,NCBI_Entire-Group_117),(NCBI_Entire-Group_113,NCBI_Entire-Group_114,NCBI_Entire-Group_111,NCBI_Entire-Group_112)),((NCBI_Entire-Group_106,NCBI_Entire-Group_107),((Suberites_ficus,NCBI_Entire-Group_118),NCBI_Entire-Group_110)))); TREE 'NCBI_Tree4336_Eukaryota' = [&R] ((Fungi,((NCBI_Entire-Group_106,NCBI_Entire-Group_107),((Suberites_ficus,NCBI_Entire-Group_118),(((NCBI_Entire-Group_114,NCBI_Entire-Group_113,NCBI_Entire-Group_112),NCBI_Entire-Group_111),(NCBI_Entire-Group_116,NCBI_Entire-Group_117,NCBI_Entire-Group_115)),NCBI_Entire-Group_110))),Bacteria,Archaea); TREE 'Tree4370_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Vulpes_velox,Alopex_lagopus),Canis_lupus),NCBI_Entire-Group_009),NCBI_Entire-Group_010)))); TREE 'NCBI_Tree4370_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Alopex_lagopus,Canis_lupus,Vulpes_velox),NCBI_Entire-Group_010),NCBI_Entire-Group_009)))); TREE 'Tree4371_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Vulpes_velox,Alopex_lagopus),Canis_lupus),NCBI_Entire-Group_009),NCBI_Entire-Group_010)))); TREE 'NCBI_Tree4371_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Alopex_lagopus,Canis_lupus,Vulpes_velox),NCBI_Entire-Group_010),NCBI_Entire-Group_009)))); TREE 'Tree4407_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Gremmeniella_abietina,Hymenoscyphus_fructigenus),(((NCBI_Entire-Group_165,Cyttaria_darwinii),((((((Arthonia_radiata,NCBI_Entire-Group_205),NCBI_Entire-Group_163),((NCBI_Entire-Group_223,NCBI_Entire-Group_225),(MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_241))),((((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6),NCBI_Entire-Group_157),NCBI_Entire-Group_194)),(Holwaya_mucida,(NCBI_Entire-Group_189,NCBI_Entire-Group_245))),((Meria_laricis,NCBI_Entire-Group_192),(Sclerotinia_sclerotiorum,(Monilinia_fructicola,Monilinia_laxa))))),NCBI_Entire-Group_191),NCBI_Entire-Group_188),(((Ascocoryne_sarcoides,Chloroscypha),NCBI_Entire-Group_244),Bisporella_citrina)),((((Cudonia_circinans,Cudonia_confusa,Cudonia_lutea),Spathularia_flavida),Lophodermium_pinastri),(Rhytisma_acerinum,Rhytisma_salicinum))),NCBI_Entire-Group_190)))); TREE 'NCBI_Tree4407_Fungi' = [&R] (((((((NCBI_Entire-Group_165,NCBI_Entire-Group_163),(((Cudonia_lutea,Cudonia_circinans,Spathularia_flavida,Cudonia_confusa),(Rhytisma_acerinum,Meria_laricis,Lophodermium_pinastri,Rhytisma_salicinum)),Cyttaria_darwinii,(NCBI_Entire-Group_190,NCBI_Entire-Group_192,(Monilinia_laxa,Monilinia_fructicola,Sclerotinia_sclerotiorum),(Holwaya_mucida,Bisporella_citrina,Ascocoryne_sarcoides,Gremmeniella_abietina,Chloroscypha,Hymenoscyphus_fructigenus),NCBI_Entire-Group_188,NCBI_Entire-Group_189,NCBI_Entire-Group_191,NCBI_Entire-Group_194)),NCBI_Entire-Group_205),(NCBI_Entire-Group_223,NCBI_Entire-Group_225),Arthonia_radiata,MyTree0001_Not_Metazoa-Group_5,NCBI_Entire-Group_157,NCBI_Entire-Group_241),NCBI_Entire-Group_244,(MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_246),MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_245),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree4408_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((NCBI_Entire-Group_098,NCBI_Entire-Group_100),(((NCBI_Entire-Group_073,NCBI_Entire-Group_075),NCBI_Entire-Group_067),Phoronis))))); TREE 'NCBI_Tree4408_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((NCBI_Entire-Group_098,NCBI_Entire-Group_100),Phoronis,(NCBI_Entire-Group_073,NCBI_Entire-Group_075),NCBI_Entire-Group_067)))); TREE 'Tree4454_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Ophiodeira_monosemeia,(Lignincola_laevis,Halosphaeria_appendiculata)),((Diamantinia_citrina,((Oxydothis_frondicola,(((Lepteutypa_cupressi,Amphisphaeria_umbrina),(((Hypoxylon_fragiforme,Daldinia_concentrica),((Xylaria_acuta,Xylaria_hypoxylon),(Graphostroma_platystoma,Diatrype_disciformis))),Cainia_graminis)),NCBI_Entire-Group_215)),NCBI_Entire-Group_161)),((NCBI_Entire-Group_170,NCBI_Entire-Group_172),(((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_166),((NCBI_Entire-Group_175,NCBI_Entire-Group_178),MyTree0001_Not_Metazoa-Magnaporthe_grisea))))),(NCBI_Entire-Group_163,NCBI_Entire-Group_222),NCBI_Entire-Group_212)))); TREE 'NCBI_Tree4454_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((NCBI_Entire-Group_175,NCBI_Entire-Group_178),(MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2,NCBI_Entire-Group_172),NCBI_Entire-Group_166,NCBI_Entire-Group_170),(Halosphaeria_appendiculata,Lignincola_laevis,Ophiodeira_monosemeia)),(Diamantinia_citrina,Diatrype_disciformis,Graphostroma_platystoma,(Daldinia_concentrica,Hypoxylon_fragiforme,Xylaria_acuta,Xylaria_hypoxylon),(Amphisphaeria_umbrina,Cainia_graminis,Lepteutypa_cupressi,Oxydothis_frondicola),NCBI_Entire-Group_161,NCBI_Entire-Group_163),MyTree0001_Not_Metazoa-Magnaporthe_grisea,NCBI_Entire-Group_212,NCBI_Entire-Group_215),NCBI_Entire-Group_222)))); TREE 'Tree4481_Fungi' = [&R] (((((((Cordyceps_takaomontana,Torrubiella_flava),(((Cordyceps_bassiana,Cordyceps_brongniartii),Cordyceps_militaris),Isaria_japonica,Verticillium_fungicola)),Engyodontium_album,Verticillium_leptobactrum,Metarhizium_anisopliae,((Cordyceps_subsessilis,Tolypocladium_cylindrosporum),Cordyceps_cylindrica,Berkelella_stilbigera,(Nomuraea_rileyi,Verticillium_bulbillosum),(Paecilomyces_lilacinus,Paecilomyces_nostocoides),Paecilomyces_carneus,Paecilomyces_marquandii,(Acremonium_lolii,Neotyphodium_uncinatum),Ephelis_japonica,Claviceps_paspali,Claviceps_sorghicola,Claviceps_purpurea)),((Gibberella_fujikuroi,Gibberella_zeae),Nectria_cinnabarina)),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree4481_Fungi' = [&R] (((((((Nectria_cinnabarina,Gibberella_zeae,Gibberella_fujikuroi),(Berkelella_stilbigera,Cordyceps_bassiana,Cordyceps_cylindrica,Cordyceps_takaomontana,Cordyceps_brongniartii,Ephelis_japonica,Claviceps_sorghicola,Acremonium_lolii,Cordyceps_militaris,Isaria_japonica,Cordyceps_subsessilis,Nomuraea_rileyi,Claviceps_paspali,Tolypocladium_cylindrosporum,Metarhizium_anisopliae,(Torrubiella_flava,Verticillium_leptobactrum,Verticillium_fungicola),Claviceps_purpurea,Neotyphodium_uncinatum)),(Paecilomyces_nostocoides,Paecilomyces_marquandii,Paecilomyces_carneus,Paecilomyces_lilacinus)),Verticillium_bulbillosum,Engyodontium_album),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree4482_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((((((Cordyceps_takaomontana,Cordyceps_militaris,Isaria_japonica),Torrubiella_flava),(Cordyceps_bassiana,Cordyceps_brongniartii)),Verticillium_fungicola),Engyodontium_album,Verticillium_leptobactrum,(Cordyceps_subsessilis,Tolypocladium_cylindrosporum),(Cordyceps_cylindrica,(Paecilomyces_lilacinus,Paecilomyces_nostocoides)),((Metarhizium_anisopliae,Nomuraea_rileyi),Verticillium_bulbillosum,Paecilomyces_carneus,Paecilomyces_marquandii,Acremonium_lolii,Ephelis_japonica),Claviceps_purpurea),MyTree0001_Not_Metazoa-Group_4)))); TREE 'NCBI_Tree4482_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(Engyodontium_album,Verticillium_bulbillosum,((Paecilomyces_lilacinus,Paecilomyces_carneus,Paecilomyces_marquandii,Paecilomyces_nostocoides),((Claviceps_purpurea,(Verticillium_fungicola,Verticillium_leptobactrum,Torrubiella_flava),Metarhizium_anisopliae,Tolypocladium_cylindrosporum,Nomuraea_rileyi,Cordyceps_subsessilis,Isaria_japonica,Cordyceps_militaris,Acremonium_lolii,Ephelis_japonica,Cordyceps_brongniartii,Cordyceps_takaomontana,Cordyceps_cylindrica,Cordyceps_bassiana),MyTree0001_Not_Metazoa-Group_4)))))); TREE 'Tree4547_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Sminthopsis_douglasi,MyTree0001_Metazoa-Didelphis_marsupialis),(((((Loxodonta_africana,NCBI_Entire-Group_032),((((Canis_lupus,NCBI_Entire-Group_010),(Equus_caballus,NCBI_Entire-Group_023)),(Bos_taurus,MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa)),NCBI_Entire-Group_011)),(Aotus_trivirgatus,MyTree0001_Metazoa-Group_7)),NCBI_Entire-Group_007),(((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_14),MyTree0001_Metazoa-Cavia_porcellus),(Lepus_capensis,Oryctolagus_cuniculus)))),MyTree0001_Metazoa-Group_5)))); TREE 'NCBI_Tree4547_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Sminthopsis_douglasi,MyTree0001_Metazoa-Didelphis_marsupialis),(Loxodonta_africana,(Bos_taurus,MyTree0001_Metazoa-Group_10,MyTree0001_Metazoa-Sus_scrofa),NCBI_Entire-Group_032,(Aotus_trivirgatus,MyTree0001_Metazoa-Group_7),(Canis_lupus,NCBI_Entire-Group_010),(Equus_caballus,NCBI_Entire-Group_023),(Lepus_capensis,Oryctolagus_cuniculus),((MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6),MyTree0001_Metazoa-Cavia_porcellus),NCBI_Entire-Group_007,NCBI_Entire-Group_011)),MyTree0001_Metazoa-Group_5)))); TREE 'Tree4555_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((Schizosaccharomyces_pombe,(MyTree0001_Not_Metazoa-Group_10,(MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_216))),(((((Moesziomyces_bullatus,((Ustilago_tritici,Ustilago_hordei),(Ustilago_maydis,(Sporisorium_reilianum,Sporisorium_formosanum)))),Cintractia_axicola),NCBI_Entire-Group_128),((NCBI_Entire-Group_132,(NCBI_Entire-Group_133,((((((NCBI_Entire-Group_146,NCBI_Entire-Group_153),MyTree0001_Not_Metazoa-Group_8),NCBI_Entire-Group_142),NCBI_Entire-Group_151),NCBI_Entire-Group_138),NCBI_Entire-Group_143))),MyTree0001_Not_Metazoa-Cryptococcus_neoformans)),(((NCBI_Entire-Group_126,NCBI_Entire-Group_131),NCBI_Entire-Group_129),NCBI_Entire-Group_125))),NCBI_Entire-Group_121)))); TREE 'NCBI_Tree4555_Fungi' = [&R] (((((((NCBI_Entire-Group_128,NCBI_Entire-Group_129,NCBI_Entire-Group_131),NCBI_Entire-Group_125,NCBI_Entire-Group_126),(((NCBI_Entire-Group_132,NCBI_Entire-Group_133),MyTree0001_Not_Metazoa-Cryptococcus_neoformans),((MyTree0001_Not_Metazoa-Group_8,NCBI_Entire-Group_146),(NCBI_Entire-Group_151,NCBI_Entire-Group_153),NCBI_Entire-Group_138,NCBI_Entire-Group_142,NCBI_Entire-Group_143)),(Sporisorium_formosanum,Ustilago_hordei,Ustilago_tritici,Sporisorium_reilianum,Moesziomyces_bullatus,Cintractia_axicola,Ustilago_maydis)),((MyTree0001_Not_Metazoa-Group_4,NCBI_Entire-Group_216),Schizosaccharomyces_pombe,MyTree0001_Not_Metazoa-Group_10),NCBI_Entire-Group_121),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'Tree719_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,((MyTree0001_Not_Metazoa-Group_10,NCBI_Entire-Group_156),((((NCBI_Entire-Group_237,NCBI_Entire-Group_236),(Eurotium_rubrum,(Aspergillus_niger,Aspergillus_fumigatus,Aspergillus_flavus,Aspergillus_aculeatus))),((((NCBI_Entire-Group_163,(Coccodinium_bartschii,(((NCBI_Entire-Group_209,Lophiostoma_crenatum),(Herpotrichia_diffusa,(Curreya_pityophila,((Cucurbitaria_berberidis,NCBI_Entire-Group_212),NCBI_Entire-Group_207)))),NCBI_Entire-Group_197))),NCBI_Entire-Group_204),NCBI_Entire-Group_205),((((Capronia_pilosella,MyTree0001_Not_Metazoa-Group_6),(Exophiala_dermatitidis,Capronia_mansonii)),NCBI_Entire-Group_240),(NCBI_Entire-Group_230,(NCBI_Entire-Group_231,NCBI_Entire-Group_234))))),(((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_182),NCBI_Entire-Group_178)),NCBI_Entire-Group_139)))); TREE 'NCBI_Tree719_Fungi' = [&R] (Archaea,Bacteria,(Viridiplantae,(Metazoa,(((((Aspergillus_aculeatus,Aspergillus_flavus,Aspergillus_fumigatus,Aspergillus_niger,Eurotium_rubrum),(NCBI_Entire-Group_237,NCBI_Entire-Group_236)),((Coccodinium_bartschii,(((Cucurbitaria_berberidis,Curreya_pityophila),NCBI_Entire-Group_204,NCBI_Entire-Group_205,NCBI_Entire-Group_207),NCBI_Entire-Group_212,(Herpotrichia_diffusa,Lophiostoma_crenatum),NCBI_Entire-Group_209),NCBI_Entire-Group_197),(((MyTree0001_Not_Metazoa-Group_1,MyTree0001_Not_Metazoa-Group_2),NCBI_Entire-Group_178),NCBI_Entire-Group_182),NCBI_Entire-Group_163),((Capronia_mansonii,Capronia_pilosella,Exophiala_dermatitidis),NCBI_Entire-Group_240),((NCBI_Entire-Group_231,NCBI_Entire-Group_234),NCBI_Entire-Group_230)),MyTree0001_Not_Metazoa-Group_10,MyTree0001_Not_Metazoa-Group_6,NCBI_Entire-Group_156),NCBI_Entire-Group_139)))); TREE 'Tree899_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((Harmothoe_imbricata,(Nereis_virens,((NCBI_Entire-Group_068,NCBI_Entire-Group_082),((NCBI_Entire-Group_069,NCBI_Entire-Group_076),((NCBI_Entire-Group_072,NCBI_Entire-Group_073),NCBI_Entire-Group_071))))),(((MyTree0001_Metazoa-Group_1,NCBI_Entire-Group_095,NCBI_Entire-Group_096),MyTree0001_Metazoa-Onchocerca_volvulus),((NCBI_Entire-Group_100,NCBI_Entire-Group_102),NCBI_Entire-Group_101))),MyTree0001_Metazoa-Group_15)))); TREE 'NCBI_Tree899_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((NCBI_Entire-Group_068,(((NCBI_Entire-Group_072,NCBI_Entire-Group_073),NCBI_Entire-Group_071),(((Harmothoe_imbricata,Nereis_virens),NCBI_Entire-Group_076),NCBI_Entire-Group_082)),NCBI_Entire-Group_069),((MyTree0001_Metazoa-Group_1,NCBI_Entire-Group_095),NCBI_Entire-Group_096),(NCBI_Entire-Group_100,NCBI_Entire-Group_101),NCBI_Entire-Group_102),MyTree0001_Metazoa-Group_15),MyTree0001_Metazoa-Onchocerca_volvulus)))); TREE 'Tree926_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((((((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_7),MyTree0001_Metazoa-Group_12),(MyTree0001_Metazoa-Group_5,NCBI_Entire-Group_049)),(NCBI_Entire-Group_038,NCBI_Entire-Group_047)),(MyTree0001_Metazoa-Alligator_mississippiensis,MyTree0001_Metazoa-Chelonia_mydas)),(MyTree0001_Metazoa-Group_15,((Gastrophryne_carolinensis,NCBI_Entire-Group_054),(NCBI_Entire-Group_055,(((Ichthyophis_bannanicus,NCBI_Entire-Group_058),(Discoglossus_pictus,Scaphiopus_holbrooki)),Typhlonectes_natans),NCBI_Entire-Group_056)))),MyTree0001_Metazoa-Latimeria_chalumnae)))); TREE 'NCBI_Tree926_Metazoa' = [&R] (((((((MyTree0001_Metazoa-Group_6,MyTree0001_Metazoa-Group_12,MyTree0001_Metazoa-Group_7),(((NCBI_Entire-Group_038,NCBI_Entire-Group_047),((MyTree0001_Metazoa-Group_5,NCBI_Entire-Group_049),MyTree0001_Metazoa-Alligator_mississippiensis)),MyTree0001_Metazoa-Chelonia_mydas)),((((Scaphiopus_holbrooki,MyTree0001_Metazoa-Group_15),(Gastrophryne_carolinensis,NCBI_Entire-Group_054),Discoglossus_pictus),(NCBI_Entire-Group_056,NCBI_Entire-Group_055)),(NCBI_Entire-Group_058,Typhlonectes_natans,Ichthyophis_bannanicus))),MyTree0001_Metazoa-Latimeria_chalumnae),Fungi),Viridiplantae),Bacteria,Archaea); TREE 'Tree928_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,(((MyTree0001_Metazoa-Danio_rerio,MyTree0001_Metazoa-Oncorhynchus_mykiss),(Gadus_morhua,MyTree0001_Metazoa-Group_13)),(((Elephas_maximus,Equus_caballus,((Balaenoptera_physalus,Physeter_catodon,Canis_lupus,MyTree0001_Metazoa-Sus_scrofa),(Oryctolagus_cuniculus,MyTree0001_Metazoa-Group_8,MyTree0001_Metazoa-Group_7),(((Myocastor_coypus,NCBI_Entire-Group_022),Cavia_porcellus),(MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6)))),((MyTree0001_Metazoa-Group_11,NCBI_Entire-Group_008),(Balaenoptera_borealis,Bos_taurus,NCBI_Entire-Group_010))),(((Struthio_camelus,Meleagris_gallopavo,MyTree0001_Metazoa-Group_5),MyTree0001_Metazoa-Alligator_mississippiensis),NCBI_Entire-Group_050)))))); TREE 'NCBI_Tree928_Metazoa' = [&R] (Archaea,Bacteria,(Viridiplantae,(Fungi,((((Gadus_morhua,MyTree0001_Metazoa-Group_13),MyTree0001_Metazoa-Oncorhynchus_mykiss),MyTree0001_Metazoa-Danio_rerio),(((Struthio_camelus,((Meleagris_gallopavo,MyTree0001_Metazoa-Group_5),NCBI_Entire-Group_050)),MyTree0001_Metazoa-Alligator_mississippiensis),(Elephas_maximus,Equus_caballus,Oryctolagus_cuniculus,((Physeter_catodon,(Balaenoptera_borealis,Balaenoptera_physalus)),(Bos_taurus,MyTree0001_Metazoa-Group_11),MyTree0001_Metazoa-Sus_scrofa,NCBI_Entire-Group_008),(MyTree0001_Metazoa-Group_8,MyTree0001_Metazoa-Group_7),(Canis_lupus,NCBI_Entire-Group_010),((MyTree0001_Metazoa-Group_14,MyTree0001_Metazoa-Group_6),(Cavia_porcellus,Myocastor_coypus,NCBI_Entire-Group_022)))))))); TREE 'Tree940_Archaea' = [&R] (Bacteria,(Eukaryota,(((Pyrodictium_occultum,(MyTree0000-Desulfurococcus_amylolyticus,MyTree0000-Group_1)),NCBI_Entire-Group_294),(((((NCBI_Entire-Group_297,NCBI_Entire-Group_298),NCBI_Entire-Group_296),MyTree0000-Group_0),MyTree0000-Group_2),NCBI_Entire-Group_295)))); TREE 'NCBI_Tree940_Archaea' = [&R] (Eukaryota,Bacteria,((NCBI_Entire-Group_297,MyTree0000-Group_0,MyTree0000-Group_2,NCBI_Entire-Group_295,NCBI_Entire-Group_296,NCBI_Entire-Group_298),(MyTree0000-Group_1,(MyTree0000-Desulfurococcus_amylolyticus,Pyrodictium_occultum),NCBI_Entire-Group_294))); TREE 'Tree940_Bacteria' = [&R] (((Thermotoga_maritima,((NCBI_Entire-Group_307,((NCBI_Entire-Group_310,NCBI_Entire-Group_320),((Chlorobium_tepidum,NCBI_Entire-Group_301),(NCBI_Entire-Group_339,(((NCBI_Entire-Group_309,NCBI_Entire-Group_331),NCBI_Entire-Group_323),NCBI_Entire-Group_312))))),NCBI_Entire-Group_304)),NCBI_Entire-Group_303),(Eukaryota,Archaea)); TREE 'NCBI_Tree940_Bacteria' = [&R] ((((NCBI_Entire-Group_310,NCBI_Entire-Group_309),NCBI_Entire-Group_307),((NCBI_Entire-Group_320,NCBI_Entire-Group_323),NCBI_Entire-Group_312,NCBI_Entire-Group_331),NCBI_Entire-Group_339,Thermotoga_maritima,Chlorobium_tepidum,NCBI_Entire-Group_301,NCBI_Entire-Group_303,NCBI_Entire-Group_304),Eukaryota,Archaea); TREE 'Tree940_Eukaryota' = [&R] (Bacteria,((((Fungi,((((((Achlya_bisexualis,NCBI_Entire-Group_003),(Viridiplantae,Metazoa)),(NCBI_Entire-Group_293,MyTree0001_Not_Metazoa-Group_19)),(NCBI_Entire-Group_286,MyTree0001_Not_Metazoa-Entamoeba_histolytica)),MyTree0001_Not_Metazoa-Group_15),MyTree0001_Not_Metazoa-Dictyostelium_discoideum)),(Giardia_lamblia,NCBI_Entire-Group_287)),Tritrichomonas_foetus),Archaea)); TREE 'NCBI_Tree940_Eukaryota' = [&R] ((Viridiplantae,NCBI_Entire-Group_286,(Giardia_lamblia,NCBI_Entire-Group_287),MyTree0001_Not_Metazoa-Group_15,MyTree0001_Not_Metazoa-Group_19,(Achlya_bisexualis,NCBI_Entire-Group_003),(Metazoa,Fungi),NCBI_Entire-Group_293,MyTree0001_Not_Metazoa-Dictyostelium_discoideum,Tritrichomonas_foetus,MyTree0001_Not_Metazoa-Entamoeba_histolytica),Bacteria,Archaea); TREE 'Tree941_Fungi' = [&R] ((((Penicillium_aculeatum,(Penicillium_capsulatum,(Penicillium_implicatum,(Penicillium_cyaneum,((Eupenicillium_anatolicum,(Penicillium_roseopurpureum,(Penicillium_citrinum,Penicillium_miczynskii))),((((Eupenicillium_pinetorum,((Penicillium_spinulosum,(Eupenicillium_lapidosum,Penicillium_thomii)),(Penicillium_purpurescens,Penicillium_glabrum))),Penicillium_lividum),(Penicillium_herquei,((Penicillium_adametzioides,Penicillium_bilaiae),((Eupenicillium_hirayamae,Penicillium_sclerotiorum),Penicillium_adametzii)))),((Eupenicillium_rubidurum,(Penicillium_pimiteouiense,((Penicillium_striatisporum,Penicillium_vinaceum),Eupenicillium_parvum))),(Eupenicillium_erubescens,(Penicillium_dimorphosporum,(Eupenicillium_alutaceum,((((Penicillium_melinii,(Penicillium_velutinum,(Penicillium_raciborskii,Eupenicillium_terrenum))),(Eupenicillium_katangense,Penicillium_restrictum)),(Penicillium_citreonigrum,Penicillium_cinerascens)),Penicillium_decumbens)))))))))),Talaromyces_helicus),Metazoa),Viridiplantae),Bacteria,Archaea); TREE 'NCBI_Tree941_Fungi' = [&R] ((((Talaromyces_helicus,Penicillium_vinaceum,Penicillium_velutinum,Penicillium_thomii,Penicillium_striatisporum,Penicillium_spinulosum,Penicillium_sclerotiorum,Penicillium_roseopurpureum,Penicillium_restrictum,Penicillium_raciborskii,Penicillium_purpurescens,Penicillium_pimiteouiense,Penicillium_miczynskii,Penicillium_melinii,Penicillium_lividum,Penicillium_implicatum,Penicillium_herquei,Penicillium_glabrum,Penicillium_dimorphosporum,Penicillium_decumbens,Penicillium_cyaneum,Penicillium_citrinum,Penicillium_citreonigrum,Penicillium_cinerascens,Penicillium_capsulatum,Penicillium_bilaiae,Penicillium_adametzioides,Penicillium_adametzii,Penicillium_aculeatum,Eupenicillium_terrenum,Eupenicillium_rubidurum,Eupenicillium_pinetorum,Eupenicillium_parvum,Eupenicillium_lapidosum,Eupenicillium_katangense,Eupenicillium_hirayamae,Eupenicillium_erubescens,Eupenicillium_anatolicum,Eupenicillium_alutaceum),Metazoa),Viridiplantae),Bacteria,Archaea);